Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATHisKA
Count
HisKA 1
Count
HisKA 2
Count
HisKA 3
Count
HWE HK
Count
RRReceiver
Count
1Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9131300020
2Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.088635317116
3Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.6705482693
4Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2362760353
5Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.1544531571
6Agrobacterium vitis S4BProt ARh1337276,320,94642.5483451858
7Rhizobium etli CFN 42BProt ARh1393276,530,22839.0473931462
8Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9161510019
9Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9151410019
10Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9161510019
11Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9151410019
12Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9151410019
13Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9161510019
14Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9161510019
15Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9161510019
16Azospirillum sp. B510BProt AR3255177,599,73832.410189813142
17Gluconobacter oxydans 621HBProt AR1332562,922,38439.2151021221
18Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8322360349
19Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5272511035
20Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9262011429
21Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.2644871884
22Methylobacterium extorquens AM1BProt ARh2056,879,77831.57451751194
23Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1373302259
24Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1201721031
25Sphingobium japonicum UT26SBProt AS1994954,424,86235.1282420243
26Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.8524221763
27Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.0423221755
28Chelativorans sp. BNC1BProt ARh1069044,935,18538.9262100532
29Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4352630641
30Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.8402921855
31Rhizobium etli CIAT 652BProt ARh2802146,448,04838.7433620557
32Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.9362651452
33Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.49720014
34Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.55136501059
35Sinorhizobium meliloti 1021BProt ARh1936,691,69437.8382802853
36Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9262101433
37Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7151311029
38Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2292512139
39Ruegeria sp. TM1040BProt AR1304034,153,69939.9363411039
40Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5440004
41Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.0332650251
42Methylobacterium extorquens DM4160933180,08335.0000000
43Caulobacter sp. K31BProt AC1630635,889,39932.77053521082
44Sphingomonas wittichii RW1BProt AS1734335,915,24632.1353120258
45Methylobacterium sp. 4-46BProt ARh1880937,737,02528.592707213115
46Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.97854841295
47Methylobacterium populi BJ001BProt ARh1955935,848,99730.693649416103
48Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0322701439
49Rhizobium sp. NGR234BProt ARh2110136,891,90037.6373011554
50Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4262321043
51Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.0533942869
52Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6383240257
53Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8191511220
54Brucella suis 1330BProt ARh32023,315,17542.7181510219
55Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8191511220
56Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8171311219
57Jannaschia sp. CCS1BProt AR1273324,404,04937.8161410122
58Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.5131100223
59Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.7434030052
60Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.27552451497
61Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8181411219
62Rickettsia africae ESF-5BProt ARi1826921,290,91767.6330004
63Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5330004
64Brucella abortus S19BProt ARh1899923,283,93642.8191511220
65Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.9473920665
66Brucella canis ATCC 23365BProt ARh2024323,312,76942.8181510218
67Brucella suis ATCC 23445BProt ARh2037123,324,60742.80N/AN/AN/AN/A0
68Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7141211028
69Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2000000
70Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8191511220
71Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4330004
72Brucella microti CCM 4915BProt ARh3223323,337,36942.7171410220
73Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8000001
74Bartonella grahamii as4aupBProt ARh3487322,369,52062.010810110
75Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.98064457115
76Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2330004
77Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6440004
78Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0440004
79Bartonella quintana str. ToulouseBProt ARh4411,581,38461.210810110
80Bartonella henselae str. Houston-1BProt ARh19611,931,04761.810810110
81Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8220003
82Caulobacter crescentus CB15BProt AC29814,016,94732.8544131963
83Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9330004
84Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4330004
85Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9220003
86Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5330004
87Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5440003
88Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1440004
89Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0220004
90Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.79720014
91Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8220003
92Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9330004
93Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7330004
94Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5330005
95Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5330005
96Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.0221910232
97Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9141020220
98Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3440005
99Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3440004
100Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1221811229
101Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.0504053271
102Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.2463732462
103Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0524361278
104Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.6474122276
105Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5330006
106Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.98583110111
107Bartonella bacilliformis KC583BProt ARh1624911,445,02161.89710111
108Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2330004
109Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9151211120
110Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4440004
111Maricaulis maris MCS10BProt AR1733313,368,78037.3343301046
112Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7373420142
113Rhodospirillum centenum SWBProt AR1830714,355,54829.5483940555
114Methylobacterium extorquens PA1BProt ARh1863715,471,15431.86945831383
115Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5330009
116Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7220003
117Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.56752211287
118Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0440004
119Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5440004
120Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.1523932869
121Methylocella silvestris BL2BProt ARh2063514,305,43036.9352634245
122Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.26600010
123Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6272212239
124Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5440004
125Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8220003
126Caulobacter crescentus NA1000BProt AC3202714,042,92932.8544131963
127Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6000000
128Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0330004
129Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2362514648
130Wolbachia sp. wRiBProt ARi3327311,445,87364.8220003
131Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.36848521372
132Starkeya novella DSM 506BProt ARh3765914,765,02332.1353112150

Acknowledgements:

This research is funded by:

Developed by: