Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Methylobacterium extorquens DM4160933180,08335.0N/AN/AN/A
2Caulobacter crescentus CB15BProt AC29814,016,94732.81215
3Caulobacter sp. K31BProt AC1630635,889,39932.71228
4Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.91417
5Caulobacter crescentus NA1000BProt AC3202714,042,92932.81215
6Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6N/AN/AN/A
7Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.31225
8Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4133
9Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2448
10Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6137
11Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7223
12Jannaschia sp. CCS1BProt AR1273324,404,04937.8N/A36
13Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2138
14Ruegeria sp. TM1040BProt AR1304034,153,69939.9N/A36
15Gluconobacter oxydans 621HBProt AR1332562,922,38439.2124
16Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1138
17Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9123
18Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.04410
19Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8345
20Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.9134
21Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1N/A36
22Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9122
23Maricaulis maris MCS10BProt AR1733313,368,78037.3137
24Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5135
25Rhodospirillum centenum SWBProt AR1830714,355,54829.51413
26Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7223
27Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.94410
28Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9N/A22
29Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9N/A22
30Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9N/A22
31Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9N/A22
32Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9N/A22
33Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9N/A22
34Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9N/A22
35Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9N/A22
36Azospirillum sp. B510BProt AR3255177,599,73832.41610
37Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8N/AN/AN/A
38Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.92417
39Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.523N/A
40Sinorhizobium meliloti 1021BProt ARh1936,691,69437.81311
41Methylobacterium extorquens AM1BProt ARh2056,879,77831.51514
42Bartonella quintana str. ToulouseBProt ARh4411,581,38461.2N/A31
43Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.01216
44Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8131
45Bartonella henselae str. Houston-1BProt ARh19611,931,04761.8N/A31
46Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.01211
47Brucella suis 1330BProt ARh32023,315,17542.7132
48Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.11314
49Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8132
50Chelativorans sp. BNC1BProt ARh1069044,935,18538.9236
51Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8132
52Agrobacterium vitis S4BProt ARh1337276,320,94642.5139
53Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1134
54Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4128
55Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.01213
56Rhizobium etli CFN 42BProt ARh1393276,530,22839.0237
57Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.01319
58Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.212N/A
59Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0129
60Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.61219
61Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.71214
62Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.21215
63Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8132
64Bartonella bacilliformis KC583BProt ARh1624911,445,02161.8N/A3N/A
65Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.81310
66Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7135
67Methylobacterium extorquens PA1BProt ARh1863715,471,15431.8139
68Methylobacterium sp. 4-46BProt ARh1880937,737,02528.513N/A
69Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.01316
70Brucella abortus S19BProt ARh1899923,283,93642.8132
71Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9139
72Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.91314
73Methylobacterium populi BJ001BProt ARh1955935,848,99730.61311
74Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.51215
75Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.21316
76Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.11315
77Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.82316
78Brucella canis ATCC 23365BProt ARh2024323,312,76942.8132
79Brucella suis ATCC 23445BProt ARh2037123,324,60742.8N/AN/A2
80Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.62316
81Methylocella silvestris BL2BProt ARh2063514,305,43036.9128
82Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0125
83Rhizobium sp. NGR234BProt ARh2110136,891,90037.61310
84Rhizobium etli CIAT 652BProt ARh2802146,448,04838.72314
85Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2N/AN/A1
86Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6138
87Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5N/A2N/A
88Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8132
89Brucella microti CCM 4915BProt ARh3223323,337,36942.7132
90Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2127
91Bartonella grahamii as4aupBProt ARh3487322,369,52062.0N/A31
92Starkeya novella DSM 506BProt ARh3765914,765,02332.1137
93Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2N/A2N/A
94Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6N/A2N/A
95Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0N/A2N/A
96Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8N/A2N/A
97Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9N/A2N/A
98Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4N/A2N/A
99Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9N/A2N/A
100Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5N/A2N/A
101Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5N/A2N/A
102Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1N/A2N/A
103Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0N/A2N/A
104Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8N/A2N/A
105Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9N/A2N/A
106Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7N/A2N/A
107Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5N/A2N/A
108Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5N/A2N/A
109Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5N/A2N/A
110Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3N/A2N/A
111Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3N/A2N/A
112Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5N/A2N/A
113Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2N/A2N/A
114Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4N/A1N/A
115Rickettsia africae ESF-5BProt ARi1826921,290,91767.6N/A2N/A
116Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5N/A2N/A
117Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5N/A2N/A
118Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7N/A2N/A
119Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0N/A2N/A
120Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5N/A2N/A
121Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8N/A2N/A
122Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4N/A2N/A
123Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0N/A2N/A
124Wolbachia sp. wRiBProt ARi3327311,445,87364.8N/A2N/A
125Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9136
126Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.7131
127Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9126
128Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.51311
129Sphingomonas wittichii RW1BProt AS1734335,915,24632.11314
130Sphingobium japonicum UT26SBProt AS1994954,424,86235.1139
131Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.213N/A
132Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.4131

Acknowledgements:

This research is funded by:

Developed by: