Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
132 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Novosphingobium aromaticivorans DSM 12444BProt AS20434,233,31434.9136
2Zymomonas mobilis subsp. mobilis ZM4BProt AS1235412,056,41653.7131
3Erythrobacter litoralis HTCC2594BProt AS1348013,052,39836.9126
4Sphingopyxis alaskensis RB2256BProt AS1390723,373,71334.51311
5Sphingomonas wittichii RW1BProt AS1734335,915,24632.11314
6Sphingobium japonicum UT26SBProt AS1994954,424,86235.1139
7Candidatus Puniceispirillum marinum IMCC1322BProt AS2808112,753,52751.213N/A
8Zymomonas mobilis subsp. mobilis NCIMB 11163BProt AS3482142,223,52053.4131
9Anaplasma marginale str. St. MariesBProt ARi4011,197,68750.2N/A2N/A
10Rickettsia conorii str. Malish 7BProt ARi4211,268,75567.6N/A2N/A
11Rickettsia prowazekii str. Madrid EBProt ARi4311,111,52371.0N/A2N/A
12Wolbachia endosymbiont of Drosophila melanogasterBProt ARi27211,267,78264.8N/A2N/A
13Ehrlichia chaffeensis str. ArkansasBProt ARi32511,176,24869.9N/A2N/A
14Anaplasma phagocytophilum HZBProt ARi33611,471,28258.4N/A2N/A
15Neorickettsia sennetsu str. MiyayamaBProt ARi3571859,00658.9N/A2N/A
16Ehrlichia ruminantium str. WelgevondenBProt ARi961411,516,35572.5N/A2N/A
17Rickettsia rickettsii str. 'Sheila Smith'BProt ARi963611,257,71067.5N/A2N/A
18Rickettsia typhi str. WilmingtonBProt ARi1067911,111,49671.1N/A2N/A
19Ehrlichia canis str. JakeBProt ARi1069411,315,03071.0N/A2N/A
20Wolbachia endosymbiont strain TRS of Brugia malayiBProt ARi1247511,080,08465.8N/A2N/A
21Rickettsia canadensis str. McKielBProt ARi1295211,159,77268.9N/A2N/A
22Rickettsia akari str. HartfordBProt ARi1295311,231,06067.7N/A2N/A
23Ehrlichia ruminantium str. WelgevondenBProt ARi1335511,512,97772.5N/A2N/A
24Ehrlichia ruminantium str. GardelBProt ARi1335611,499,92072.5N/A2N/A
25Rickettsia felis URRWXCal2BProt ARi1388431,587,24067.5N/A2N/A
26Candidatus Pelagibacter ubique HTCC1062BProt ARi1398911,308,75970.3N/A2N/A
27Rickettsia bellii RML369-CBProt ARi1399611,522,07668.3N/A2N/A
28Orientia tsutsugamushi str. BoryongBProt ARi1618012,127,05169.5N/A2N/A
29Anaplasma marginale str. FloridaBProt ARi1636911,202,43550.2N/A2N/A
30Rickettsia bellii OSU 85-389BProt ARi1723711,528,98068.4N/A1N/A
31Rickettsia africae ESF-5BProt ARi1826921,290,91767.6N/A2N/A
32Rickettsia massiliae MTU5BProt ARi1827121,376,18467.5N/A2N/A
33Orientia tsutsugamushi str. IkedaBProt ARi1898312,008,98769.5N/A2N/A
34Neorickettsia risticii str. IllinoisBProt ARi190991879,97758.7N/A2N/A
35Rickettsia prowazekii Rp22BProt ARi1981311,111,61271.0N/A2N/A
36Rickettsia rickettsii str. IowaBProt ARi1994311,268,17567.5N/A2N/A
37Wolbachia endosymbiont of Culex quinquefasciatus PelBProt ARi3031311,482,45565.8N/A2N/A
38Rickettsia peacockii str. RusticBProt ARi3130921,314,89867.4N/A2N/A
39Anaplasma centrale str. IsraelBProt ARi3276511,206,80650.0N/A2N/A
40Wolbachia sp. wRiBProt ARi3327311,445,87364.8N/A2N/A
41Bradyrhizobium japonicum USDA 110BProt ARh1719,105,82835.92417
42Mesorhizobium loti MAFF303099BProt ARh1837,596,29737.523N/A
43Sinorhizobium meliloti 1021BProt ARh1936,691,69437.81311
44Methylobacterium extorquens AM1BProt ARh2056,879,77831.51514
45Bartonella quintana str. ToulouseBProt ARh4411,581,38461.2N/A31
46Rhodopseudomonas palustris CGA009BProt ARh5725,467,64035.01216
47Brucella melitensis bv. 1 str. 16MBProt ARh18023,294,93142.8131
48Bartonella henselae str. Houston-1BProt ARh19611,931,04761.8N/A31
49Agrobacterium tumefaciens str. C58BProt ARh28345,673,46541.01211
50Brucella suis 1330BProt ARh32023,315,17542.7132
51Rhizobium leguminosarum bv. viciae 3841BProt ARh34477,751,30939.11314
52Brucella abortus bv. 1 str. 9-941BProt ARh961923,286,44542.8132
53Chelativorans sp. BNC1BProt ARh1069044,935,18538.9236
54Brucella ovis ATCC 25840BProt ARh1251423,275,59042.8132
55Agrobacterium vitis S4BProt ARh1337276,320,94642.5139
56Agrobacterium radiobacter K84BProt ARh1340257,273,30040.1134
57Nitrobacter hamburgensis X14BProt ARh1347345,011,52238.4128
58Nitrobacter winogradskyi Nb-255BProt ARh1347413,402,09338.01213
59Rhizobium etli CFN 42BProt ARh1393276,530,22839.0237
60Rhodopseudomonas palustris HaA2BProt ARh1574715,331,65634.01319
61Rhodopseudomonas palustris BisB5BProt ARh1574914,892,71735.212N/A
62Rhodopseudomonas palustris BisB18BProt ARh1575015,513,84435.0129
63Rhodopseudomonas palustris BisA53BProt ARh1575115,505,49435.61219
64Xanthobacter autotrophicus Py2BProt ARh1575625,625,09832.71214
65Bradyrhizobium sp. BTAi1BProt ARh1613728,493,51335.21215
66Brucella melitensis biovar Abortus 2308BProt ARh1620323,278,30742.8132
67Bartonella bacilliformis KC583BProt ARh1624911,445,02161.8N/A3N/A
68Sinorhizobium medicae WSM419BProt ARh1630446,817,57638.81310
69Parvibaculum lavamentivorans DS-1BProt ARh1763913,914,74537.7135
70Methylobacterium extorquens PA1BProt ARh1863715,471,15431.8139
71Methylobacterium sp. 4-46BProt ARh1880937,737,02528.513N/A
72Methylobacterium radiotolerans JCM 2831BProt ARh1881796,899,11029.01316
73Brucella abortus S19BProt ARh1899923,283,93642.8132
74Ochrobactrum anthropi ATCC 49188BProt ARh1948565,205,77743.9139
75Methylobacterium chloromethanicum CM4BProt ARh1952736,180,73231.91314
76Methylobacterium populi BJ001BProt ARh1955935,848,99730.61311
77Bradyrhizobium sp. ORS278BProt ARh1957517,456,58734.51215
78Rhizobium leguminosarum bv. trifolii WSM1325BProt ARh2009767,418,12239.21316
79Rhodopseudomonas palustris TIE-1BProt ARh2016715,744,04135.11315
80Rhizobium leguminosarum bv. trifolii WSM2304BProt ARh2017956,872,70238.82316
81Brucella canis ATCC 23365BProt ARh2024323,312,76942.8132
82Brucella suis ATCC 23445BProt ARh2037123,324,60742.8N/AN/A2
83Methylobacterium nodulans ORS 2060BProt ARh2047788,839,02231.62316
84Methylocella silvestris BL2BProt ARh2063514,305,43036.9128
85Beijerinckia indica subsp. indica ATCC 9039BProt ARh2084134,418,61643.0125
86Rhizobium sp. NGR234BProt ARh2110136,891,90037.61310
87Rhizobium etli CIAT 652BProt ARh2802146,448,04838.72314
88Bartonella tribocorum CIP 105476BProt ARh2810922,642,40461.2N/AN/A1
89Oligotropha carboxidovorans OM5BProt ARh2880513,745,62937.6138
90Candidatus Liberibacter asiaticus str. psy62BProt ARh2983511,226,70463.5N/A2N/A
91Brucella melitensis ATCC 23457BProt ARh3056123,311,21942.8132
92Brucella microti CCM 4915BProt ARh3223323,337,36942.7132
93Hyphomicrobium denitrificans ATCC 51888BProt ARh3326113,638,96939.2127
94Bartonella grahamii as4aupBProt ARh3487322,369,52062.0N/A31
95Starkeya novella DSM 506BProt ARh3765914,765,02332.1137
96Rhodobacter capsulatus SB 1003BProt AR5523,871,92033.4133
97Rhodobacter sphaeroides 2.4.1BProt AR5674,603,06031.2448
98Rhodospirillum rubrum ATCC 11170BProt AR5824,406,55734.6137
99Gluconacetobacter diazotrophicus PAl 5BProt AR37733,999,59133.7223
100Jannaschia sp. CCS1BProt AR1273324,404,04937.8N/A36
101Paracoccus denitrificans PD1222BProt AR1302035,236,19433.2138
102Ruegeria sp. TM1040BProt AR1304034,153,69939.9N/A36
103Gluconobacter oxydans 621HBProt AR1332562,922,38439.2124
104Hyphomonas neptunium ATCC 15444BProt AR1572113,705,02138.1138
105Acidiphilium cryptum JF-5BProt AR1575393,963,08032.9123
106Rhodobacter sphaeroides ATCC 17029BProt AR1575434,489,38031.04410
107Rhodobacter sphaeroides ATCC 17025BProt AR1575564,557,12731.8345
108Magnetospirillum magneticum AMB-1BProt AR1621714,967,14834.9134
109Roseobacter denitrificans OCh 114BProt AR1642654,331,23441.1N/A36
110Granulibacter bethesdensis CGDNIH1BProt AR1711112,708,35540.9122
111Maricaulis maris MCS10BProt AR1733313,368,78037.3137
112Dinoroseobacter shibae DFL 12BProt AR1741764,417,86834.5135
113Rhodospirillum centenum SWBProt AR1830714,355,54829.51413
114Gluconacetobacter diazotrophicus PAl 5BProt AR2107123,914,94733.7223
115Rhodobacter sphaeroides KD131BProt AR3111144,711,13930.94410
116Acetobacter pasteurianus IFO 3283-01BProt AR3112973,340,24946.9N/A22
117Acetobacter pasteurianus IFO 3283-03BProt AR3113173,339,66946.9N/A22
118Acetobacter pasteurianus IFO 3283-07BProt AR3113373,338,42646.9N/A22
119Acetobacter pasteurianus IFO 3283-22BProt AR3113573,339,64946.9N/A22
120Acetobacter pasteurianus IFO 3283-26BProt AR3113773,339,68346.9N/A22
121Acetobacter pasteurianus IFO 3283-32BProt AR3113973,337,04046.9N/A22
122Acetobacter pasteurianus IFO 3283-01-42CBProt AR3114173,247,99546.9N/A22
123Acetobacter pasteurianus IFO 3283-12BProt AR3220373,336,99046.9N/A22
124Azospirillum sp. B510BProt AR3255177,599,73832.41610
125Hirschia baltica ATCC 49814BProt AR3319123,540,11454.8N/AN/AN/A
126Caulobacter crescentus CB15BProt AC29814,016,94732.81215
127Caulobacter sp. K31BProt AC1630635,889,39932.71228
128Phenylobacterium zucineum HLK1BProt AC1993124,379,23128.91417
129Caulobacter crescentus NA1000BProt AC3202714,042,92932.81215
130Candidatus Hodgkinia cicadicola DsemBProt AC321351143,79541.6N/AN/AN/A
131Caulobacter segnis ATCC 21756BProt AC3727714,655,62232.31225
132Methylobacterium extorquens DM4160933180,08335.0N/AN/AN/A

Acknowledgements:

This research is funded by:

Developed by: