Genome Atlas - 3.0 (beta)

264 projects found

Available Tables

Row	Organism	Tax Group	NCBI Project ID	Replicons	Total Size (bp)	% AT	% Global Direct Repeats	% Global Inverted Repeats	% Local Direct Repeats	% Local Inverted Repeats	% Local Mirror Repeats	% Local Everted Repeats	% Simple Repeats

1	Xenorhabdus bovienii SS-2004		13399	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
2	Escherichia coli B str. REL606		18281	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
3	Vibrio cholerae O395		32853	2	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
4	Shewanella violacea DSS12		34739	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
5	Salmonella enterica subsp. enterica serovar Typhimurium		40625	1	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
6	Escherichia coli RS218	VDCP	19411	1	40,207	53.1	0.30	0.00	5.00	2.20	2.30	1.50	0.70
7	Escherichia coli O103:H2 str. 12009		32511	2	75,546	50.9	10.70	10.80	4.50	3.10	2.60	2.10	0.10
8	Escherichia coli O26:H11 str. 11368		32509	5	158,291	50.6	14.58	5.15	5.21	4.64	3.02	2.11	0.16
9	Candidatus Carsonella ruddii PV	BProt GC	17977	1	159,662	83.4	0.10	0.10	53.90	52.00	53.20	49.70	3.20
10	Yersinia pestis D106004		36507	4	172,202	52.3	3.04	1.71	4.69	3.27	2.34	1.94	0.04
11	Yersinia pestis D182038		36545	4	175,319	52.2	5.56	1.75	4.60	3.12	2.29	1.96	0.20
12	Escherichia coli O111:H- str. 11128		32513	6	395,004	52.0	6.59	6.39	4.12	3.40	2.11	1.97	0.24
13	Buchnera aphidicola str. Cc (Cinara cedri)	BProt GE	16372	2	422,434	79.8	0.20	0.00	41.99	33.91	40.79	31.88	3.20
14	Candidatus Riesia pediculicola USDA	BProt GE	29065	2	582,127	71.4	2.28	6.02	15.28	13.29	13.93	10.87	0.81
15	Buchnera aphidicola str. Bp (Baizongia pistaciae)	BProt GE	256	2	618,379	74.7	0.04	0.00	21.79	16.80	21.31	15.31	1.11
16	Buchnera aphidicola str. Sg (Schizaphis graminum)	BProt GE	312	1	641,454	74.7	0.00	0.00	23.40	19.20	22.20	16.80	1.30
17	Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)	BProt GE	31223	1	641,895	73.7	0.00	0.00	20.90	17.40	19.90	15.20	1.20
18	Buchnera aphidicola str. 5A (Acyrthosiphon pisum)	BProt GE	31225	1	642,122	73.7	0.00	0.00	20.90	17.40	20.00	15.30	1.10
19	Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	BProt GC	12513	1	686,194	66.8	0.10	1.60	8.10	7.30	6.60	5.70	0.40
20	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	BProt GE	274	2	703,004	77.5	0.11	1.49	33.40	27.60	31.51	25.18	2.00
21	Candidatus Blochmannia floridanus	BProt GE	443	1	705,557	72.6	0.10	0.20	16.40	12.90	15.10	11.10	0.70
22	Candidatus Blochmannia pennsylvanicus str. BPEN	BProt GE	13875	1	791,654	70.4	0.10	0.00	12.90	11.90	11.70	10.10	0.60
23	Candidatus Vesicomyosocius okutanii HA	BProt GS	18267	1	1,022,154	68.4	0.00	0.30	9.40	7.00	7.70	5.70	0.50
24	Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)	BProt GS	16841	1	1,160,782	66.0	0.10	0.40	7.10	5.40	5.80	4.20	0.40
25	Dichelobacter nodosus VCS1703A	BProt GC	50	1	1,389,350	55.6	4.00	0.80	6.60	3.90	4.20	2.70	0.50
26	Haemophilus ducreyi 35000HP	BProt GPa	38	1	1,698,955	61.8	4.80	3.80	5.90	4.50	4.30	3.10	0.40
27	Haemophilus influenzae PittEE	BProt GPa	16400	1	1,813,033	62.0	3.10	3.50	6.10	5.00	4.40	3.30	0.50
28	Haemophilus influenzae Rd KW20	BProt GPa	219	1	1,830,138	61.8	3.40	3.00	6.20	5.10	4.40	3.40	0.50
29	Moraxella catarrhalis RH4	BProt GPs	46869	1	1,863,286	58.3	1.90	1.70	6.20	5.00	3.20	2.40	0.50
30	Haemophilus influenzae PittGG	BProt GPa	16401	1	1,887,192	62.0	3.10	2.50	6.30	5.00	4.50	3.40	0.50
31	Francisella tularensis subsp. holarctica FTNF002-00	BProt GT	20197	1	1,890,909	67.8	8.80	5.10	9.00	6.40	7.00	5.30	0.50
32	Francisella tularensis subsp. tularensis NE061598	BProt GT	38289	1	1,892,681	67.7	7.60	3.70	8.90	6.20	6.90	5.30	0.50
33	Francisella tularensis subsp. tularensis SCHU S4	BProt GT	9	1	1,892,819	67.7	7.60	3.70	8.90	6.20	6.90	5.30	0.50
34	Francisella tularensis subsp. mediasiatica FSC147	BProt GT	19571	1	1,893,886	67.8	7.30	4.60	8.90	6.10	7.00	5.30	0.50
35	Francisella tularensis subsp. holarctica OSU18	BProt GT	17265	1	1,895,727	67.8	8.90	5.40	8.90	6.40	7.00	5.30	0.50
36	Francisella tularensis subsp. holarctica OSU18	BProt GT	32025	1	1,895,727	67.8	8.90	5.40	8.90	6.40	7.00	5.30	0.50
37	Francisella tularensis subsp. holarctica	BProt GT	16421	1	1,895,994	67.8	9.10	5.40	9.00	6.40	7.00	5.30	0.50
38	Francisella tularensis subsp. tularensis WY96-3418	BProt GT	18459	1	1,898,476	67.7	7.90	3.80	8.90	6.20	6.80	5.30	0.50
39	Francisella novicida U112	BProt GT	16088	1	1,910,031	67.5	2.90	2.00	8.80	6.20	6.80	5.20	0.50
40	Haemophilus influenzae 86-028NP	BProt GPa	11752	1	1,913,428	61.8	2.90	3.50	6.20	5.10	4.40	3.30	0.50
41	Coxiella burnetii CbuG_Q212	BProt GL	19137	1	2,008,870	57.4	4.40	3.90	4.40	3.80	3.40	2.60	0.30
42	Haemophilus somnus 129PT	BProt GPa	322	2	2,012,878	62.8	4.70	4.04	6.81	4.83	4.82	3.31	0.50
43	Coxiella burnetii RSA 493	BProt GL	41	2	2,032,674	57.4	3.66	3.24	4.32	3.79	3.44	2.61	0.30
44	Francisella philomiragia subsp. philomiragia ATCC 25017	BProt GT	27853	2	2,049,711	67.4	4.11	3.39	8.42	5.61	6.81	4.70	0.50
45	Coxiella burnetii RSA 331	BProt GL	16791	2	2,053,744	57.3	5.42	4.91	4.32	3.79	3.44	2.61	0.30
46	Coxiella burnetii CbuK_Q154	BProt GL	19139	2	2,102,380	57.4	5.46	5.10	4.42	3.80	3.43	2.71	0.30
47	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	BProt GE	31259	2	2,169,363	59.5	12.17	11.97	5.77	4.51	4.39	3.39	0.01
48	Aggregatibacter actinomycetemcomitans D11S-1	BProt GPa	40107	4	2,204,665	55.7	2.87	2.31	5.00	4.11	3.58	2.65	0.29
49	Coxiella burnetii Dugway 5J108-111	BProt GL	16721	2	2,212,937	57.6	4.18	3.24	4.41	3.79	3.53	2.60	0.30
50	Actinobacillus pleuropneumoniae serovar 3 str. JL03	BProt GPa	19135	1	2,242,062	58.8	3.80	2.80	5.50	4.80	4.10	2.90	0.40
51	Pasteurella multocida subsp. multocida str. Pm70	BProt GPa	39	1	2,257,487	59.6	2.60	1.70	4.80	4.10	3.50	2.60	0.30
52	Haemophilus somnus 2336	BProt GPa	388	1	2,263,857	62.6	5.40	3.10	6.50	4.80	4.90	3.40	0.50
53	Haemophilus parasuis SH0165	BProt GPa	31099	1	2,269,156	60.0	8.60	7.30	6.00	4.90	3.80	2.90	0.40
54	Actinobacillus pleuropneumoniae L20	BProt GPa	18221	1	2,274,482	58.7	4.10	3.00	5.60	4.80	4.00	2.90	0.40
55	Aggregatibacter aphrophilus NJ8700	BProt GPa	36579	1	2,313,035	57.8	3.10	2.10	4.90	4.20	3.70	2.80	0.00
56	Mannheimia succiniciproducens MBEL55E	BProt GPa	13068	1	2,314,078	57.5	3.30	2.60	5.20	4.70	3.70	3.00	0.40
57	Actinobacillus succinogenes 130Z	BProt GPa	13370	1	2,319,663	55.1	2.50	1.90	4.90	4.10	3.30	2.50	0.30
58	Actinobacillus pleuropneumoniae serovar 7 str. AP76	BProt GPa	29909	4	2,345,435	58.8	5.37	2.88	5.58	4.81	4.10	2.81	0.40
59	Thiomicrospira crunogena XCL-2	BProt GT	13018	1	2,427,734	56.9	2.00	0.70	4.10	3.20	2.90	2.00	0.30
60	Xylella fastidiosa M12	BProt GX	17823	1	2,475,130	48.1	7.00	2.50	4.90	2.10	3.10	1.40	0.40
61	Xylella fastidiosa Temecula1	BProt GX	285	2	2,521,148	48.2	9.69	1.90	5.30	2.20	3.20	1.40	0.40
62	Xylella fastidiosa M23	BProt GX	18457	2	2,573,987	48.3	10.19	2.07	5.37	2.20	3.19	1.40	0.40
63	Halothiobacillus neapolitanus c2	BProt GC	31049	1	2,582,886	45.3	2.50	1.60	4.00	3.10	2.30	1.80	0.00
64	Psychrobacter arcticus 273-4	BProt GPs	9633	1	2,650,701	57.2	5.10	4.60	4.60	4.20	2.90	2.00	0.50
65	Halorhodospira halophila SL1	BProt GC	15767	1	2,678,452	32.0	2.20	0.70	11.40	7.60	6.80	5.80	0.90
66	Idiomarina loihiensis L2TR	BProt GA	10790	1	2,839,318	53.0	2.30	1.30	3.20	2.40	2.30	1.70	0.30
67	Kangiella koreensis DSM 16069	BProt GK	29443	1	2,852,073	56.3	1.20	0.20	3.50	2.80	2.40	1.80	0.30
68	Acidithiobacillus ferrooxidans ATCC 23270	BProt GA	53	1	2,982,397	41.2	3.60	4.00	4.80	3.20	2.80	2.20	0.30
69	Thioalkalivibrio sp. K90mix	BProt GC	30759	2	2,985,056	34.5	3.79	2.25	8.84	5.62	5.12	4.26	0.64
70	Psychrobacter sp. PRwf-1	BProt GPs	15759	3	2,995,049	55.2	5.87	3.18	4.71	3.41	2.41	1.81	0.50
71	Sideroxydans lithotrophicus ES-1	BProt BG	33161	1	3,003,656	42.5	1.30	1.30	5.40	3.50	2.50	2.10	0.40
72	Psychrobacter cryohalolentis K5	BProt GPs	13920	2	3,101,097	57.8	1.89	2.37	4.51	3.82	2.82	2.21	0.40
73	Alcanivorax borkumensis SK2	BProt GO	13005	1	3,120,143	45.3	1.10	0.80	3.70	2.60	2.10	1.60	0.30
74	Alkalilimnicola ehrlichii MLHE-1	BProt GC	15763	1	3,275,944	32.5	3.60	2.70	11.60	7.30	6.80	6.00	0.80
75	Methylococcus capsulatus str. Bath	BProt GM	21	1	3,304,561	36.4	2.30	2.00	7.00	4.80	4.40	3.60	0.50
76	Nitrosococcus watsoni C-113	BProt GC	40331	3	3,373,286	49.9	3.26	1.48	3.13	2.41	2.11	1.71	0.20
77	Legionella pneumophila subsp. pneumophila str. Philadelphia 1	BProt GL	22	1	3,397,754	61.7	2.50	1.60	4.70	4.00	3.50	2.70	0.30
78	Legionella pneumophila str. Lens	BProt GL	13126	2	3,405,519	61.6	2.76	1.77	4.77	4.01	3.50	2.82	0.20
79	Thioalkalivibrio sp. HL-EbGR7	BProt GC	29177	1	3,464,554	34.9	2.60	2.30	11.60	7.30	5.10	4.60	1.30
80	Tolumonas auensis DSM 9187	BProt GA	33873	1	3,471,292	51.0	3.60	2.50	4.20	3.10	2.20	1.70	0.30
81	Legionella pneumophila 2300/99 Alcoy	BProt GL	18743	1	3,516,334	61.6	3.20	2.20	4.70	4.10	3.60	2.70	0.20
82	Nitrosococcus oceani ATCC 19707	BProt GC	13993	2	3,522,111	49.7	2.79	2.17	3.12	2.41	2.20	1.70	0.20
83	Legionella pneumophila str. Corby	BProt GL	17491	1	3,576,470	61.5	4.70	3.80	4.70	4.00	3.50	2.70	0.20
84	Acinetobacter sp. ADP1	BProt GPs	12352	1	3,598,621	59.6	2.30	1.80	4.80	4.40	3.40	2.60	0.30
85	Legionella pneumophila str. Paris	BProt GL	13127	2	3,635,495	61.7	3.57	2.12	4.71	3.99	3.50	2.80	0.30
86	Allochromatium vinosum DSM 180	BProt GC	32547	3	3,669,074	35.8	2.84	2.11	9.45	5.55	4.67	3.83	0.01
87	Chromohalobacter salexigens DSM 3043	BProt GO	12636	1	3,696,649	36.1	2.00	1.50	8.40	5.60	4.20	3.60	0.60
88	Acinetobacter baumannii AB307-0294	BProt GPs	30993	1	3,760,981	61.0	2.90	1.90	5.70	5.10	4.10	3.40	0.30
89	Edwardsiella tarda EIB202	BProt GE	28539	2	3,804,166	40.3	3.37	2.37	7.99	4.99	3.99	3.09	0.69
90	Edwardsiella ictaluri 93-146	BProt GE	34853	1	3,812,315	42.6	6.90	5.40	6.20	4.10	3.00	2.30	0.50
91	Erwinia amylovora CFBP1430	BProt GE	46805	2	3,833,832	46.4	3.18	1.79	4.41	3.31	2.31	1.90	0.00
92	Pseudoalteromonas haloplanktis TAC125	BProt GA	15713	2	3,850,272	59.9	2.75	1.84	4.95	4.25	3.42	2.58	0.32
93	Erwinia amylovora ATCC 49946	BProt GE	43757	3	3,905,604	46.4	3.23	1.66	4.31	3.30	2.32	1.90	0.01
94	Vibrio cholerae M66-2	BProt GV	32851	2	3,938,905	52.4	3.54	1.87	3.38	3.01	2.07	1.80	0.22
95	Vibrio cholerae O1 biovar El Tor str. N16961	BProt GV	36	2	4,033,464	52.5	4.22	1.89	3.45	3.04	2.07	1.80	0.27
96	Acinetobacter baumannii AYE	BProt GPs	28921	5	4,048,735	60.7	4.37	2.70	5.61	5.12	4.01	3.42	0.30
97	Acinetobacter baumannii AB0057	BProt GPs	21111	2	4,059,242	60.8	4.69	2.79	5.61	5.11	4.00	3.41	0.30
98	Erwinia tasmaniensis Et1/99	BProt GE	20585	6	4,067,864	46.6	2.32	1.57	4.44	3.24	2.32	2.00	0.39
99	Erwinia pyrifoliae DSM 12163	BProt GE	37877	5	4,072,827	46.6	6.82	4.84	4.41	3.31	2.40	1.90	0.30
100	Erwinia pyrifoliae Ep1/96	BProt GE	34779	5	4,072,846	46.6	6.82	4.84	4.51	3.41	2.40	1.90	0.30
101	Proteus mirabilis HI4320	BProt GE	12624	2	4,099,895	61.1	3.57	1.99	5.72	5.41	4.61	3.80	0.40
102	Vibrio cholerae O395	BProt GV	15667	2	4,132,319	52.5	3.80	3.52	3.48	3.01	2.10	1.73	0.30
103	Nitrosococcus halophilus Nc4	BProt GC	36589	2	4,145,260	48.4	6.10	3.54	3.40	2.60	2.20	1.70	0.20
104	Legionella longbeachae NSW150	BProt GL	39579	2	4,149,158	62.9	3.44	2.40	5.09	4.30	4.08	3.11	0.29
105	Acinetobacter sp. DR1	BProt GPs	46105	1	4,152,543	61.3	2.50	2.20	5.50	5.00	4.10	3.40	0.30
106	Vibrio cholerae MJ-1236	BProt GV	33555	2	4,236,368	52.7	4.41	3.53	3.45	2.98	2.10	1.80	0.27
107	Vibrio fischeri ES114	BProt GV	12986	3	4,284,050	61.6	3.34	1.86	5.06	4.64	3.68	2.85	0.37
108	Sodalis glossinidius str. 'morsitans'	BProt GE	16309	4	4,292,502	45.5	10.50	9.77	4.40	3.23	2.82	2.30	0.30
109	Shewanella amazonensis SB2B	BProt GA	13385	1	4,306,142	46.4	2.30	1.40	4.00	2.90	2.00	1.60	0.30
110	Alteromonas macleodii 'Deep ecotype'	BProt GA	13374	1	4,412,282	55.1	2.60	2.00	3.20	2.80	2.30	1.80	0.20
111	Vibrio fischeri MJ11	BProt GV	19393	3	4,503,336	61.8	3.69	1.35	5.18	4.56	3.74	2.90	0.30
112	Cronobacter sakazakii ATCC BAA-894	BProt GE	12720	3	4,530,777	43.3	3.38	1.54	6.16	4.00	3.28	2.69	0.40
113	Shewanella denitrificans OS217	BProt GA	13390	1	4,545,906	54.9	6.00	4.10	3.80	3.10	2.20	1.70	0.40
114	Escherichia coli BL21(DE3)	BProt GE	28965	1	4,557,041	49.2	3.80	3.00	3.80	3.30	2.30	1.90	0.00
115	Escherichia coli BL21(DE3)	BProt GE	20713	1	4,558,953	49.2	3.80	3.10	3.80	3.30	2.30	1.90	0.30
116	Psychromonas ingrahamii 37	BProt GA	16187	1	4,559,598	59.9	8.20	5.30	5.50	4.30	3.50	2.80	0.40
117	Shigella dysenteriae Sd197	BProt GE	13145	3	4,560,911	49.0	14.79	14.59	3.45	3.02	2.06	1.72	0.20
118	Pseudomonas stutzeri A1501	BProt GPs	16817	1	4,567,418	36.1	3.30	3.10	8.80	5.80	4.60	3.90	0.60
119	Escherichia coli BL21(DE3)	BProt GE	30681	1	4,570,938	49.2	4.00	3.00	3.80	3.30	2.30	1.90	0.00
120	Stenotrophomonas maltophilia R551-3	BProt GX	17107	1	4,573,969	33.7	2.90	2.30	11.60	7.80	6.00	5.20	0.80
121	Shigella flexneri 5 str. 8401	BProt GE	16375	1	4,574,284	49.1	9.30	9.70	3.60	3.00	2.20	1.80	0.30
122	Cellvibrio japonicus Ueda107	BProt GPs	28329	1	4,576,573	48.0	3.30	1.40	4.20	3.10	2.20	1.60	0.30
123	Escherichia coli BW2952	BProt GE	33775	1	4,578,159	49.2	4.10	3.30	3.90	3.20	2.30	1.80	0.00
124	Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	BProt GE	30943	1	4,581,797	47.8	2.30	2.10	4.20	3.20	2.60	2.10	0.30
125	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150	BProt GE	13086	1	4,585,229	47.8	2.40	2.10	4.20	3.20	2.60	2.10	0.30
126	Cronobacter turicensis	BProt GE	39965	4	4,599,155	42.7	2.14	1.53	6.16	4.09	3.39	2.68	0.01
127	Shigella flexneri 2a str. 2457T	BProt GE	408	1	4,599,354	49.1	9.60	9.10	3.60	3.00	2.30	1.80	0.30
128	Salmonella enterica subsp. arizonae serovar 62:z4,z23:--	BProt GE	13030	1	4,600,800	48.6	3.50	2.20	4.00	3.10	2.60	2.00	0.30
129	Shewanella loihica PV-4	BProt GA	13906	1	4,602,594	46.3	2.70	1.80	5.10	3.00	2.20	1.70	0.50
130	Escherichia coli DH1	BProt GE	30031	1	4,630,707	49.2	3.90	3.30	3.90	3.20	2.30	1.80	0.30
131	Escherichia coli str. K-12 substr. MG1655	BProt GE	225	1	4,639,675	49.2	3.70	3.20	3.90	3.20	2.30	1.80	0.30
132	Escherichia coli HS	BProt GE	13959	1	4,643,538	49.2	3.70	3.20	3.90	3.20	2.20	1.90	0.30
133	Escherichia fergusonii ATCC 35469	BProt GE	33369	2	4,643,861	50.1	2.99	1.61	3.72	3.00	2.30	1.70	0.30
134	Yersinia pestis Nepal516	BProt GE	16646	3	4,646,286	52.4	6.89	5.35	4.79	3.00	2.49	1.80	0.30
135	Shigella boydii Sb227	BProt GE	13146	2	4,646,520	48.9	12.15	11.54	3.60	3.00	2.12	1.81	0.30
136	Aliivibrio salmonicida LFI1238	BProt GV	30703	6	4,655,660	61.0	12.01	12.00	4.50	4.29	3.30	2.70	0.30
137	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	BProt GE	30689	1	4,658,697	47.8	2.40	2.30	4.20	3.20	2.70	2.10	0.30
138	Shewanella putrefaciens CN-32	BProt GA	13393	1	4,659,220	55.5	3.80	2.70	3.70	3.10	2.40	1.90	0.30
139	Enterobacter sp. 638	BProt GE	17461	2	4,676,461	47.1	2.44	1.95	4.11	2.83	2.31	1.81	0.30
140	Dickeya dadantii Ech703	BProt GE	33069	1	4,679,450	45.0	2.80	1.70	5.20	3.60	2.80	2.20	0.40
141	Yersinia enterocolitica subsp. enterocolitica 8081	BProt GE	190	2	4,683,620	52.8	4.80	3.98	3.82	3.02	2.31	1.91	0.20
142	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	BProt GE	30687	1	4,685,848	47.8	2.60	2.10	4.20	3.20	2.60	2.10	0.30
143	Escherichia coli str. K-12 substr. DH10B	BProt GE	20079	1	4,686,137	49.2	8.80	3.50	3.90	3.20	2.30	1.80	0.30
144	Yersinia pestis Angola	BProt GE	16067	3	4,687,014	52.4	7.80	7.02	4.61	3.01	2.40	1.81	0.29
145	Yersinia pseudotuberculosis YPIII	BProt GE	28743	1	4,689,441	52.5	4.60	2.20	5.00	3.00	2.60	1.90	0.30
146	Pantoea ananatis LMG 20103	BProt GE	43085	1	4,690,298	46.3	1.60	1.30	4.00	3.00	2.20	1.80	0.00
147	Escherichia coli IAI1	BProt GE	33373	1	4,700,560	49.2	3.30	3.30	4.00	3.20	2.30	1.90	0.30
148	Yersinia pestis KIM 10	BProt GE	288	2	4,701,745	52.3	6.56	5.47	4.79	2.90	2.49	1.80	0.30
149	Shewanella sp. MR-4	BProt GA	13904	1	4,706,287	52.1	2.80	2.10	3.50	2.90	2.10	1.70	0.30
150	Shewanella sp. W3-18-1	BProt GA	13902	1	4,708,380	55.4	3.50	3.00	3.70	3.20	2.30	1.80	0.30
151	Yersinia pestis Z176003	BProt GE	36547	4	4,725,788	52.3	N/A	N/A	4.80	3.01	2.49	1.80	0.01
152	Yersinia pestis Pestoides F	BProt GE	16700	3	4,725,862	52.3	5.27	5.32	4.80	2.90	2.49	1.80	0.30
153	Citrobacter koseri ATCC BAA-895	BProt GE	12716	3	4,735,357	46.2	3.39	1.69	4.50	3.31	2.50	2.00	0.30
154	Aeromonas hydrophila subsp. hydrophila ATCC 7966	BProt GA	16697	1	4,744,448	38.4	3.00	1.90	8.90	5.00	3.70	3.00	0.70
155	Escherichia coli ATCC 8739	BProt GE	18083	1	4,746,218	49.1	4.10	3.00	4.00	3.20	2.30	1.90	0.30
156	Yersinia pseudotuberculosis PB1/+	BProt GE	28745	2	4,765,431	52.5	4.56	2.92	5.00	3.01	2.60	1.90	0.30
157	Marinobacter aquaeolei VT8	BProt GA	13239	3	4,779,762	43.1	4.64	4.35	4.30	2.96	2.19	1.87	0.29
158	Salmonella enterica subsp. enterica serovar Typhi str. Ty2	BProt GE	371	1	4,791,961	47.9	3.00	3.00	4.10	3.30	2.60	2.00	0.30
159	Shewanella sp. MR-7	BProt GA	13903	2	4,799,109	52.1	3.30	2.50	3.50	2.91	2.10	1.70	0.30
160	Yersinia pestis biovar Microtus str. 91001	BProt GE	10638	5	4,803,217	52.3	6.41	5.25	4.79	2.92	2.49	1.81	0.30
161	Dickeya zeae Ech1591	BProt GE	31295	1	4,813,854	45.5	5.20	4.00	5.40	3.70	2.90	2.20	0.40
162	Dickeya dadantii Ech586	BProt GE	33667	1	4,818,394	46.4	3.30	1.90	4.70	3.10	2.50	1.80	0.00
163	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	BProt GE	19459	3	4,823,887	47.8	2.62	2.47	4.22	3.22	2.60	2.11	0.30
164	Shigella flexneri 2a str. 301	BProt GE	310	2	4,828,821	49.3	10.89	11.54	3.62	3.02	2.24	1.81	0.30
165	Yersinia pestis CO92	BProt GE	34	4	4,829,855	52.4	6.47	6.41	4.80	3.00	2.39	1.80	0.30
166	Salmonella enterica subsp. enterica serovar Agona str. SL483	BProt GE	20063	2	4,836,638	48.0	3.08	2.39	4.31	3.21	2.70	2.10	0.30
167	Escherichia coli SE15	BProt GE	19053	2	4,839,683	49.3	2.78	2.23	3.83	3.22	2.22	1.81	0.30
168	Yersinia pseudotuberculosis IP 32953	BProt GE	12950	3	4,840,898	52.4	4.85	2.91	5.01	3.01	2.61	1.90	0.30
169	Shewanella frigidimarina NCIMB 400	BProt GA	13391	1	4,845,257	58.4	4.20	2.70	4.30	3.60	2.90	2.20	0.30
170	Stenotrophomonas maltophilia K279a	BProt GX	30351	1	4,851,126	33.7	3.70	2.60	11.70	7.90	6.10	5.50	0.90
171	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	BProt GE	27803	1	4,858,887	47.9	2.70	2.40	4.10	3.20	2.60	2.00	0.30
172	Pectobacterium carotovorum subsp. carotovorum PC1	BProt GE	31289	1	4,862,913	48.1	3.20	1.70	4.10	3.00	2.30	1.80	0.00
173	Shigella boydii CDC 3083-94	BProt GE	15637	6	4,874,659	49.0	15.15	15.32	3.66	3.02	2.15	1.82	0.30
174	Yersinia pestis Antiqua	BProt GE	16645	4	4,879,836	52.3	8.52	6.54	4.79	2.91	2.39	1.80	0.30
175	Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594	BProt GE	20993	2	4,888,494	47.8	2.38	3.07	4.11	3.21	2.61	2.00	0.30
176	Shigella flexneri 2002017	BProt GE	33639	6	4,894,492	49.4	11.02	11.07	3.71	3.04	2.24	1.81	0.29
177	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853	BProt GE	19467	2	4,917,459	47.9	2.56	2.08	4.21	3.21	2.61	2.10	0.30
178	Yersinia pseudotuberculosis IP 31758	BProt GE	16070	3	4,935,125	52.8	5.00	3.37	4.91	3.04	2.63	1.92	0.30
179	Escherichia coli 536	BProt GE	16235	1	4,938,920	49.5	3.90	3.20	3.80	3.20	2.30	1.90	0.30
180	Xanthomonas oryzae pv. oryzae MAFF 311018	BProt GX	16297	1	4,940,217	36.3	17.60	15.20	8.10	5.90	4.80	4.00	0.60
181	Xanthomonas oryzae pv. oryzae KACC10331	BProt GX	12931	1	4,941,439	36.3	17.20	15.20	8.20	5.90	4.80	4.00	0.60
182	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	BProt GE	9618	3	4,944,000	47.9	3.56	3.38	4.13	3.21	2.60	2.01	0.30
183	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	BProt GE	241	2	4,951,371	47.8	2.75	3.06	4.22	3.21	2.60	2.10	0.30
184	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	BProt GE	33067	2	4,964,097	47.8	3.05	3.94	4.22	3.21	2.60	2.10	0.30
185	Vibrio splendidus LGP32	BProt GV	32815	2	4,974,821	56.1	2.67	1.39	3.87	3.10	2.50	2.00	0.30
186	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	BProt GE	20045	3	4,983,515	47.9	2.78	2.26	4.20	3.21	2.59	2.10	0.30
187	Salmonella enterica subsp. enterica serovar Newport str. SL254	BProt GE	18747	3	5,007,719	47.8	2.53	3.14	4.20	3.21	2.59	2.09	0.30
188	Aeromonas salmonicida subsp. salmonicida A449	BProt GA	16723	6	5,040,536	41.8	5.96	3.74	6.00	3.78	2.57	2.09	0.39
189	Shigella sonnei Ss046	BProt GE	13151	5	5,055,316	49.2	12.65	12.08	3.84	3.02	2.25	1.92	0.30
190	Saccharophagus degradans 2-40	BProt GA	316	1	5,057,531	54.2	2.80	1.60	4.10	2.90	2.70	1.90	0.40
191	Pectobacterium wasabiae WPP163	BProt GE	31293	1	5,063,892	49.5	4.10	2.80	4.00	3.00	2.40	2.00	0.00
192	Pectobacterium atrosepticum SCRI1043	BProt GE	350	1	5,064,019	49.0	4.60	3.20	4.00	2.80	2.30	1.80	0.30
193	Escherichia coli O127:H6 str. E2348/69	BProt GE	32571	3	5,069,678	49.5	4.71	3.71	3.92	3.11	2.33	1.91	0.30
194	Xanthomonas campestris pv. campestris str. ATCC 33913	BProt GX	296	1	5,076,188	34.9	4.70	3.30	10.00	6.90	5.50	4.90	0.80
195	Xanthomonas campestris pv. campestris str. B100	BProt GX	29801	1	5,079,002	35.0	4.50	3.20	10.00	6.80	5.50	4.80	0.80
196	Vibrio sp. Ex25	BProt GV	40507	2	5,089,025	55.1	2.43	1.26	3.23	3.06	2.46	1.87	0.20
197	Photorhabdus asymbiotica	BProt GE	30577	2	5,094,138	57.9	12.93	9.05	5.00	3.91	3.41	2.60	0.30
198	Marinomonas sp. MWYL1	BProt GO	17445	1	5,100,344	57.4	3.70	2.30	4.10	3.20	2.80	2.00	0.20
199	Escherichia coli IHE3034	BProt GE	43693	1	5,108,383	49.3	4.10	3.60	3.90	3.20	2.20	1.90	0.30
200	Vibrio vulnificus CMCP6	BProt GV	349	2	5,126,797	53.3	3.52	1.29	3.50	2.93	2.43	1.80	0.26
201	Shewanella oneidensis MR-1	BProt GA	335	2	5,131,416	54.1	7.76	6.49	3.41	3.13	2.33	1.82	0.29
202	Escherichia coli IAI39	BProt GE	33411	1	5,132,068	49.4	6.30	6.50	3.80	3.10	2.30	1.80	0.30
203	Salmonella enterica subsp. enterica serovar Typhi str. CT18	BProt GE	236	3	5,133,713	48.1	2.75	4.04	4.13	3.20	2.57	1.98	0.29
204	Xanthomonas campestris pv. campestris str. 8004	BProt GX	15	1	5,148,708	35.0	4.60	3.40	9.90	6.80	5.50	4.90	0.80
205	Escherichia coli 55989	BProt GE	33413	1	5,154,862	49.3	5.90	5.10	4.00	3.20	2.30	1.90	0.30
206	Escherichia coli SE11	BProt GE	18057	7	5,155,626	49.3	4.49	3.64	4.01	3.24	2.32	1.89	0.30
207	Vibrio parahaemolyticus RIMD 2210633	BProt GV	360	2	5,165,770	54.6	2.61	1.40	3.40	3.14	2.40	1.97	0.26
208	Escherichia coli S88	BProt GE	33375	2	5,166,121	49.4	4.61	2.82	3.91	3.23	2.31	1.91	0.30
209	Escherichia coli UTI89	BProt GE	16259	2	5,179,971	49.4	3.36	2.52	3.82	3.22	2.22	1.91	0.30
210	Pseudoalteromonas atlantica T6c	BProt GA	13454	1	5,187,005	55.4	2.10	1.80	3.20	2.60	2.30	1.80	0.30
211	Teredinibacter turnerae T7901	BProt GA	30839	1	5,193,164	49.1	N/A	N/A	N/A	N/A	N/A	N/A	N/A
212	Escherichia coli ED1a	BProt GE	33409	1	5,209,548	49.3	6.10	6.50	4.00	3.30	2.30	1.80	0.30
213	Escherichia coli SMS-3-5	BProt GE	19469	5	5,215,377	49.5	3.93	3.17	3.95	3.12	2.31	1.91	0.30
214	Shewanella halifaxensis HAW-EB4	BProt GA	20241	1	5,226,917	55.4	3.90	2.40	3.90	3.20	2.30	1.80	0.40
215	Escherichia coli CFT073	BProt GE	313	1	5,231,428	49.5	5.40	5.00	3.80	3.20	2.30	1.90	0.30
216	Xanthomonas oryzae pv. oryzae PXO99A	BProt GX	28127	1	5,240,075	36.4	24.10	16.80	8.20	5.80	4.80	3.90	0.60
217	Escherichia coli E24377A	BProt GE	13960	7	5,249,288	49.4	5.12	3.90	4.03	3.25	2.34	1.81	0.30
218	Shewanella sp. ANA-3	BProt GA	13905	2	5,251,146	52.1	2.97	2.16	3.52	3.01	2.21	1.70	0.29
219	Vibrio vulnificus YJ016	BProt GV	1430	3	5,260,086	53.3	3.63	1.70	3.57	2.97	2.31	1.90	0.30
220	Xanthomonas axonopodis pv. citri str. 306	BProt GX	297	3	5,274,174	35.3	3.29	1.98	9.23	6.58	5.19	4.48	0.69
221	Shewanella baltica OS185	BProt GA	17643	2	5,312,910	53.7	4.70	3.93	3.91	3.02	2.31	1.70	0.40
222	Shewanella baltica OS155	BProt GA	13386	5	5,342,896	53.8	6.58	5.91	3.92	2.92	2.31	1.71	0.39
223	Escherichia coli 042	BProt GE	40647	2	5,355,323	49.5	4.20	4.94	4.02	3.21	2.32	1.82	0.01
224	Escherichia coli UMN026	BProt GE	33415	3	5,358,200	49.3	4.56	3.22	4.04	3.23	2.33	1.91	0.30
225	Shewanella baltica OS223	BProt GA	17985	4	5,358,884	53.7	4.54	3.33	3.92	2.94	2.31	1.71	0.30
226	Azotobacter vinelandii DJ	BProt GPs	16	1	5,365,318	34.3	8.50	6.70	11.70	7.50	6.30	5.50	0.80
227	Colwellia psychrerythraea 34H	BProt GA	275	1	5,373,180	62.0	4.60	3.30	5.00	4.60	3.70	2.90	0.40
228	Shewanella piezotolerans WP3	BProt GA	17675	1	5,396,476	56.7	5.00	3.80	3.50	3.40	2.30	1.90	0.20
229	Xanthomonas campestris pv. vesicatoria str. 85-10	BProt GX	13649	5	5,420,152	35.4	4.09	2.91	8.98	6.60	5.11	4.44	0.68
230	Citrobacter rodentium ICC168	BProt GE	34685	4	5,444,283	45.5	0.15	0.01	5.31	3.71	2.70	2.30	0.30
231	Escherichia coli O55:H7 str. CB9615	BProt GE	42729	2	5,452,353	49.5	6.92	6.33	4.11	3.20	2.40	1.90	0.30
232	Klebsiella variicola At-22	BProt GE	37701	1	5,458,505	42.4	2.50	2.00	5.80	4.10	3.00	2.50	0.40
233	Klebsiella pneumoniae NTUH-K2044	BProt GE	21069	2	5,472,672	42.6	2.59	2.52	5.83	4.18	3.08	2.56	0.39
234	Serratia proteamaculans 568	BProt GE	17459	2	5,495,657	45.0	3.18	3.77	4.59	3.10	2.60	2.00	0.31
235	Escherichia coli APEC O1	BProt GE	16718	3	5,497,653	49.7	3.78	4.39	3.95	3.25	2.31	1.92	0.30
236	Shewanella sediminis HAW-EB3	BProt GA	18789	1	5,517,674	53.9	4.20	2.70	3.70	2.90	2.10	1.70	0.40
237	Shewanella baltica OS195	BProt GA	13389	4	5,547,544	53.8	5.11	4.24	3.91	3.02	2.32	1.71	0.39
238	Escherichia coli O157:H7 str. Sakai	BProt GE	226	3	5,594,477	49.5	8.48	8.50	4.13	3.21	2.41	1.81	0.30
239	Enterobacter cloacae subsp. cloacae ATCC 13047	BProt GE	45793	3	5,598,796	45.4	3.55	4.54	4.45	3.20	2.38	1.90	0.29
240	Escherichia coli O157:H7 EDL933	BProt GE	259	2	5,620,522	49.5	11.14	8.31	4.13	3.21	2.41	1.91	0.30
241	Escherichia coli O157:H7 str. TW14359	BProt GE	30045	2	5,622,737	49.5	0.07	0.07	4.13	3.21	2.41	1.91	0.30
242	Photorhabdus luminescens subsp. laumondii TTO1	BProt GE	9605	1	5,688,987	57.2	17.70	9.30	4.80	3.80	3.40	2.60	0.30
243	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	BProt GE	31	6	5,694,894	42.9	3.31	2.70	5.93	4.17	3.05	2.57	0.48
244	Escherichia coli O157:H7 str. EC4115	BProt GE	27739	3	5,704,171	49.6	10.35	9.94	4.15	3.13	2.42	1.91	0.31
245	Pseudomonas putida W619	BProt GPs	17053	1	5,774,330	38.6	3.30	2.60	6.60	4.70	3.20	2.70	0.50
246	Pseudomonas entomophila L48	BProt GPs	16800	1	5,888,780	35.8	6.10	4.30	10.00	6.60	4.50	3.70	0.70
247	Klebsiella pneumoniae 342	BProt GE	28471	3	5,920,257	43.1	3.54	2.22	5.71	4.05	2.96	2.46	0.39
248	Shewanella woodyi ATCC 51908	BProt GA	17455	1	5,935,403	56.3	5.10	2.70	3.70	3.00	2.40	1.80	0.30
249	Pseudomonas putida F1	BProt GPs	13909	1	5,959,964	38.1	4.50	2.90	7.30	5.20	3.30	2.90	0.60
250	Vibrio harveyi ATCC BAA-1116	BProt GV	19857	3	6,058,377	54.6	13.57	12.68	3.54	3.15	2.37	1.87	0.26
251	Pseudomonas putida GB-1	BProt GPs	17629	1	6,078,430	38.1	3.50	2.70	7.50	5.00	3.50	2.90	0.60
252	Pseudomonas syringae pv. syringae B728a	BProt GPs	323	1	6,093,698	40.8	5.50	3.30	5.50	4.20	2.80	2.40	0.40
253	Pseudomonas syringae pv. phaseolicola 1448A	BProt GPs	12416	3	6,112,448	42.1	6.27	5.29	5.08	3.81	2.49	2.08	0.30
254	Pseudomonas putida KT2440	BProt GPs	267	1	6,181,863	38.5	4.60	3.80	7.10	4.90	3.40	2.80	0.50
255	Pseudomonas aeruginosa PAO1	BProt GPs	331	1	6,264,404	33.4	3.60	2.40	12.10	7.60	6.40	5.60	0.90
256	Photobacterium profundum SS9	BProt GV	13128	3	6,403,280	58.3	9.32	7.94	3.87	3.76	2.70	2.14	0.27
257	Pseudomonas fluorescens Pf0-1	BProt GPs	12	1	6,438,405	39.5	3.90	2.80	6.80	4.30	3.40	2.70	0.50
258	Pseudomonas aeruginosa UCBPP-PA14	BProt GPs	386	1	6,537,648	33.7	3.70	2.40	12.00	7.50	6.30	5.50	0.90
259	Pseudomonas syringae pv. tomato str. DC3000	BProt GPs	359	3	6,538,260	41.7	6.90	6.09	5.16	3.69	2.59	2.28	0.39
260	Pseudomonas aeruginosa PA7	BProt GPs	16720	1	6,588,339	33.6	3.80	3.20	12.40	7.90	6.70	5.80	0.90
261	Pseudomonas aeruginosa LESB58	BProt GPs	31101	1	6,601,757	33.7	4.40	2.20	11.90	7.50	6.30	5.40	0.80
262	Pseudomonas fluorescens Pf-5	BProt GPs	327	1	7,074,893	36.7	3.80	2.20	9.10	5.80	4.00	3.40	0.60
263	Pseudomonas fluorescens SBW25	BProt GPs	31229	2	7,147,633	39.9	3.67	3.50	6.36	4.46	3.11	2.63	0.00
264	Hahella chejuensis KCTC 2396	BProt GO	16064	1	7,215,267	46.1	3.10	3.10	4.10	2.80	2.40	1.90	0.30

Acknowledgements:

This research is funded by:

A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing DCSC

Developed by:

Original concept: Peter Hallin et al.
Redesign, Current Maintainer: Stefano Borini