Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
2Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
3Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
4Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
5Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
6Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
7Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
8Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
9Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
10Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
11Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
12Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
13Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
14Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
15Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
16Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
17Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
18Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
19Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
20Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
21Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
22Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
23Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
24Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
25Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
26Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
27Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
28Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
29Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
30Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
31Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
32Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
33Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
34Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
35Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
36Vibrio fischeri ES114BProt GV1298634,284,05061.6144
37Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
38Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
39Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
40Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
41Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
42Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
43Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
44Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
45Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
46Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
47Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
48Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
49Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
50Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
51Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
52Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
53Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
54Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
55Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
56Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
57Photobacterium profundum SS9BProt GV1312836,403,28058.3163
58Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
59Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
60Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
61Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
62Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
63Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
64Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
65Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
66Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
67Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
68Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
69Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
70Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
71Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
72Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
73Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
74Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
75Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
76Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
77Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
78Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
79Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
80Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
81Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
82Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
83Vibrio sp. Ex25BProt GV4050725,089,02555.1154
84Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
85Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
86Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
87Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
88Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
89Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
90Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
91Shewanella baltica OS195BProt GA1338945,547,54453.8146
92Shewanella baltica OS155BProt GA1338655,342,89653.8155
93Shewanella baltica OS223BProt GA1798545,358,88453.7146
94Shewanella baltica OS185BProt GA1764325,312,91053.7146
95Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
96Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
97Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
98Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
99Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
100Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
101Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
102Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
103Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
104Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
105Vibrio cholerae O395BProt GV1566724,132,31952.5143
106Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
107Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
108Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
109Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
110Yersinia pestis CO92BProt GE3444,829,85552.4151
111Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
112Yersinia pestis Z176003BProt GE3654744,725,78852.3151
113Yersinia pestis KIM 10BProt GE28824,701,74552.3141
114Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
115Yersinia pestis D106004365074172,20252.3N/AN/AN/A
116Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
117Yersinia pestis D182038365454175,31952.2N/AN/AN/A
118Shewanella sp. MR-7BProt GA1390324,799,10952.1145
119Shewanella sp. MR-4BProt GA1390414,706,28752.1145
120Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
121Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
122Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
123Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
124Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
125Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
126Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
127Escherichia coli APEC O1BProt GE1671835,497,65349.7141
128Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
129Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
130Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
131Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
132Escherichia coli CFT073BProt GE31315,231,42849.5141
133Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
134Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
135Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
136Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
137Escherichia coli 536BProt GE1623514,938,92049.5141
138Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
139Escherichia coli 042BProt GE4064725,355,32349.5152
140Escherichia coli E24377ABProt GE1396075,249,28849.4142
141Escherichia coli UTI89BProt GE1625925,179,97149.4141
142Shigella flexneri 2002017BProt GE3363964,894,49249.4131
143Escherichia coli IAI39BProt GE3341115,132,06849.4142
144Escherichia coli S88BProt GE3337525,166,12149.4142
145Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
146Escherichia coli 55989BProt GE3341315,154,86249.3142
147Escherichia coli UMN026BProt GE3341535,358,20049.3152
148Escherichia coli IHE3034BProt GE4369315,108,38349.3131
149Escherichia coli ED1aBProt GE3340915,209,54849.3142
150Escherichia coli SE15BProt GE1905324,839,68349.3141
151Escherichia coli SE11BProt GE1805775,155,62649.3141
152Shigella sonnei Ss046BProt GE1315155,055,31649.2142
153Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
154Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
155Escherichia coli IAI1BProt GE3337314,700,56049.2131
156Escherichia coli BW2952BProt GE3377514,578,15949.2142
157Escherichia coli DH1BProt GE3003114,630,70749.2142
158Escherichia coli HSBProt GE1395914,643,53849.2141
159Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
160Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
161Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
162Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
163Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
164Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
165Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
166Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
167Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
168Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
169Shigella boydii Sb227BProt GE1314624,646,52048.9141
170Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
171Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
172Xylella fastidiosa M23BProt GX1845722,573,98748.3121
173Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
174Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
175Xylella fastidiosa M12BProt GX1782312,475,13048.1121
176Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
177Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
178Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
179Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
180Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
181Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
182Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
183Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
184Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
185Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
186Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
187Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
188Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
189Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
190Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
191Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
192Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
193Enterobacter sp. 638BProt GE1746124,676,46147.1143
194Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
195Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
196Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
197Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
198Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
199Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
200Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
201Shewanella loihica PV-4BProt GA1390614,602,59446.3145
202Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
203Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
204Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
205Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
206Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
207Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
208Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
209Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
210Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
211Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
212Serratia proteamaculans 568BProt GE1745925,495,65745.0142
213Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
214Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
215Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
216Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
217Cronobacter turicensisBProt GE3996544,599,15542.7142
218Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
219Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
220Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
221Klebsiella variicola At-22BProt GE3770115,458,50542.4131
222Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
223Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
224Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
225Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
226Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
227Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
228Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
229Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
230Pseudomonas putida W619BProt GPs1705315,774,33038.61415
231Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
232Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
233Pseudomonas putida F1BProt GPs1390915,959,96438.11418
234Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
235Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
236Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
237Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
238Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
239Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
240Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
241Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
242Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
243Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
244Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
245Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
246Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
247Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
248Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
249Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
250Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
251Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
252Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
253Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
254Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
255Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
256Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
257Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
258Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
259Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
260Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
261Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
262Vibrio cholerae O395328532N/AN/AN/AN/AN/A
263Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
264Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A

Acknowledgements:

This research is funded by:

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