Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
2Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
3Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
4Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
5Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
6Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
7Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
8Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
9Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
10Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
11Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
12Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
13Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
14Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
15Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
16Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
17Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
18Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
19Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
20Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
21Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
22Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
23Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
24Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
25Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
26Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
27Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
28Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
29Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
30Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
31Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
32Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
33Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
34Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
35Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
36Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
37Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
38Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
39Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
40Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
41Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
42Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
43Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
44Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
45Cronobacter turicensisBProt GE3996544,599,15542.7142
46Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
47Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
48Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
49Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
50Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
51Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
52Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
53Enterobacter sp. 638BProt GE1746124,676,46147.1143
54Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
55Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
56Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
57Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
58Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
59Escherichia coli 042BProt GE4064725,355,32349.5152
60Escherichia coli 536BProt GE1623514,938,92049.5141
61Escherichia coli 55989BProt GE3341315,154,86249.3142
62Escherichia coli APEC O1BProt GE1671835,497,65349.7141
63Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
64Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
65Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
66Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
67Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
68Escherichia coli BW2952BProt GE3377514,578,15949.2142
69Escherichia coli CFT073BProt GE31315,231,42849.5141
70Escherichia coli DH1BProt GE3003114,630,70749.2142
71Escherichia coli E24377ABProt GE1396075,249,28849.4142
72Escherichia coli ED1aBProt GE3340915,209,54849.3142
73Escherichia coli HSBProt GE1395914,643,53849.2141
74Escherichia coli IAI1BProt GE3337314,700,56049.2131
75Escherichia coli IAI39BProt GE3341115,132,06849.4142
76Escherichia coli IHE3034BProt GE4369315,108,38349.3131
77Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
78Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
79Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
80Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
81Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
82Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
83Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
84Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
85Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
86Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
87Escherichia coli S88BProt GE3337525,166,12149.4142
88Escherichia coli SE11BProt GE1805775,155,62649.3141
89Escherichia coli SE15BProt GE1905324,839,68349.3141
90Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
91Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
92Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
93Escherichia coli UMN026BProt GE3341535,358,20049.3152
94Escherichia coli UTI89BProt GE1625925,179,97149.4141
95Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
96Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
97Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
98Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
99Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
100Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
101Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
102Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
103Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
104Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
105Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
106Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
107Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
108Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
109Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
110Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
111Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
112Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
113Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
114Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
115Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
116Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
117Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
118Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
119Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
120Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
121Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
122Klebsiella variicola At-22BProt GE3770115,458,50542.4131
123Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
124Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
125Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
126Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
127Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
128Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
129Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
130Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
131Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
132Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
133Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
134Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
135Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
136Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
137Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
138Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
139Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
140Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
141Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
142Photobacterium profundum SS9BProt GV1312836,403,28058.3163
143Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
144Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
145Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
146Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
147Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
148Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
149Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
150Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
151Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
152Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
153Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
154Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
155Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
156Pseudomonas putida F1BProt GPs1390915,959,96438.11418
157Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
158Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
159Pseudomonas putida W619BProt GPs1705315,774,33038.61415
160Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
161Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
162Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
163Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
164Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
165Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
166Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
167Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
168Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
169Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
170Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
171Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
172Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
173Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
174Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
175Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
176Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
177Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
178Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
179Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
180Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
181Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
182Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
183Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
184Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
185Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
186Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
187Serratia proteamaculans 568BProt GE1745925,495,65745.0142
188Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
189Shewanella baltica OS155BProt GA1338655,342,89653.8155
190Shewanella baltica OS185BProt GA1764325,312,91053.7146
191Shewanella baltica OS195BProt GA1338945,547,54453.8146
192Shewanella baltica OS223BProt GA1798545,358,88453.7146
193Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
194Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
195Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
196Shewanella loihica PV-4BProt GA1390614,602,59446.3145
197Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
198Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
199Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
200Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
201Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
202Shewanella sp. MR-4BProt GA1390414,706,28752.1145
203Shewanella sp. MR-7BProt GA1390324,799,10952.1145
204Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
205Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
206Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
207Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
208Shigella boydii Sb227BProt GE1314624,646,52048.9141
209Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
210Shigella flexneri 2002017BProt GE3363964,894,49249.4131
211Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
212Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
213Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
214Shigella sonnei Ss046BProt GE1315155,055,31649.2142
215Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
216Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
217Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
218Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
219Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
220Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
221Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
222Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
223Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
224Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
225Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
226Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
227Vibrio cholerae O395BProt GV1566724,132,31952.5143
228Vibrio cholerae O395328532N/AN/AN/AN/AN/A
229Vibrio fischeri ES114BProt GV1298634,284,05061.6144
230Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
231Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
232Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
233Vibrio sp. Ex25BProt GV4050725,089,02555.1154
234Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
235Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
236Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
237Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
238Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
239Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
240Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
241Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
242Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
243Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
244Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
245Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
246Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
247Xylella fastidiosa M12BProt GX1782312,475,13048.1121
248Xylella fastidiosa M23BProt GX1845722,573,98748.3121
249Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
250Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
251Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
252Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
253Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
254Yersinia pestis CO92BProt GE3444,829,85552.4151
255Yersinia pestis D106004365074172,20252.3N/AN/AN/A
256Yersinia pestis D182038365454175,31952.2N/AN/AN/A
257Yersinia pestis KIM 10BProt GE28824,701,74552.3141
258Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
259Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
260Yersinia pestis Z176003BProt GE3654744,725,78852.3151
261Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
262Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
263Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
264Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141

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