Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
2Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
3Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
4Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
5Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
6Escherichia coli IHE3034BProt GE4369315,108,38349.3131
7Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
8Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
9Escherichia coli 042BProt GE4064725,355,32349.5152
10Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
11Vibrio sp. Ex25BProt GV4050725,089,02555.1154
12Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
13Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
14Cronobacter turicensisBProt GE3996544,599,15542.7142
15Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
16Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
17Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
18Klebsiella variicola At-22BProt GE3770115,458,50542.4131
19Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
20Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
21Yersinia pestis Z176003BProt GE3654744,725,78852.3151
22Yersinia pestis D182038365454175,31952.2N/AN/AN/A
23Yersinia pestis D106004365074172,20252.3N/AN/AN/A
24Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
25Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
26Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
27Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
28Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
29Escherichia coli BW2952BProt GE3377514,578,15949.2142
30Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
31Shigella flexneri 2002017BProt GE3363964,894,49249.4131
32Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
33Escherichia coli UMN026BProt GE3341535,358,20049.3152
34Escherichia coli 55989BProt GE3341315,154,86249.3142
35Escherichia coli IAI39BProt GE3341115,132,06849.4142
36Escherichia coli ED1aBProt GE3340915,209,54849.3142
37Escherichia coli S88BProt GE3337525,166,12149.4142
38Escherichia coli IAI1BProt GE3337314,700,56049.2131
39Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
40Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
41Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
42Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
43Vibrio cholerae O395328532N/AN/AN/AN/AN/A
44Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
45Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
46Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
47Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
48Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
49Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
50Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
51Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
52Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
53Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
54Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
55Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
56Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
57Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
58Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
59Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
60Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
61Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
62Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
63Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
64Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
65Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
66Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
67Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
68Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
69Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
70Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
71Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
72Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
73Escherichia coli DH1BProt GE3003114,630,70749.2142
74Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
75Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
76Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
77Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
78Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
79Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
80Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
81Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
82Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
83Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
84Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
85Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
86Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
87Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
88Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
89Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
90Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
91Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
92Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
93Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
94Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
95Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
96Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
97Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
98Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
99Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
100Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
101Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
102Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
103Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
104Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
105Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
106Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
107Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
108Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
109Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
110Escherichia coli SE15BProt GE1905324,839,68349.3141
111Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
112Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
113Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
114Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
115Xylella fastidiosa M23BProt GX1845722,573,98748.3121
116Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
117Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
118Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
119Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
120Escherichia coli SE11BProt GE1805775,155,62649.3141
121Shewanella baltica OS223BProt GA1798545,358,88453.7146
122Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
123Xylella fastidiosa M12BProt GX1782312,475,13048.1121
124Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
125Shewanella baltica OS185BProt GA1764325,312,91053.7146
126Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
127Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
128Enterobacter sp. 638BProt GE1746124,676,46147.1143
129Serratia proteamaculans 568BProt GE1745925,495,65745.0142
130Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
131Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
132Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
133Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
134Pseudomonas putida W619BProt GPs1705315,774,33038.61415
135Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
136Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
137Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
138Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
139Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
140Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
141Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
142Escherichia coli APEC O1BProt GE1671835,497,65349.7141
143Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
144Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
145Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
146Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
147Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
148Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
149Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
150Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
151Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
152Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
153Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
154Escherichia coli UTI89BProt GE1625925,179,97149.4141
155Escherichia coli 536BProt GE1623514,938,92049.5141
156Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
157Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
158Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
159Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
160Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
161Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
162Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
163Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
164Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
165Vibrio cholerae O395BProt GV1566724,132,31952.5143
166Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
167Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
168Escherichia coli E24377ABProt GE1396075,249,28849.4142
169Escherichia coli HSBProt GE1395914,643,53849.2141
170Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
171Pseudomonas putida F1BProt GPs1390915,959,96438.11418
172Shewanella loihica PV-4BProt GA1390614,602,59446.3145
173Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
174Shewanella sp. MR-4BProt GA1390414,706,28752.1145
175Shewanella sp. MR-7BProt GA1390324,799,10952.1145
176Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
177Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
178Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
179Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
180Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
181Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
182Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
183Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
184Shewanella baltica OS195BProt GA1338945,547,54453.8146
185Shewanella baltica OS155BProt GA1338655,342,89653.8155
186Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
187Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
188Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
189Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
190Shigella sonnei Ss046BProt GE1315155,055,31649.2142
191Shigella boydii Sb227BProt GE1314624,646,52048.9141
192Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
193Photobacterium profundum SS9BProt GV1312836,403,28058.3163
194Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
195Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
197Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
198Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
199Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
200Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
201Vibrio fischeri ES114BProt GV1298634,284,05061.6144
202Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
203Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
204Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
205Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
206Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
207Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
208Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
209Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
210Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
211Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
212Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
213Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
214Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
215Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
216Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
217Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
218Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
219Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
220Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
221Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
222Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
223Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
224Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
225Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
226Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
227Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
228Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
229Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
230Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
231Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
232Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
233Escherichia coli CFT073BProt GE31315,231,42849.5141
234Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
235Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
236Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
237Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
238Yersinia pestis KIM 10BProt GE28824,701,74552.3141
239Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
240Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
241Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
242Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
243Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
244Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
245Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
246Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
247Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
248Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
249Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
250Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
251Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
252Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
253Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
254Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
255Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
256Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
257Yersinia pestis CO92BProt GE3444,829,85552.4151
258Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
259Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
260Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
261Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
262Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
263Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
264Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A

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