Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
2Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
3Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
4Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
5Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
6Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
7Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
8Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
9Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
10Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
11Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
12Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
13Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
14Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
15Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
16Yersinia pestis CO92BProt GE3444,829,85552.4151
17Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
18Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
19Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
20Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
21Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
22Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
23Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
24Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
25Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
26Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
27Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
28Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
29Yersinia pestis KIM 10BProt GE28824,701,74552.3141
30Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
31Escherichia coli CFT073BProt GE31315,231,42849.5141
32Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
33Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
34Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
35Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
36Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
37Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
38Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
39Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
40Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
41Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
42Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
43Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
44Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
45Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
46Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
47Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
48Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
49Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
50Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
51Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
52Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
53Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
54Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
55Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
56Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
57Vibrio fischeri ES114BProt GV1298634,284,05061.6144
58Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
59Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
60Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
61Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
62Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
63Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
64Photobacterium profundum SS9BProt GV1312836,403,28058.3163
65Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
66Shigella boydii Sb227BProt GE1314624,646,52048.9141
67Shigella sonnei Ss046BProt GE1315155,055,31649.2142
68Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
69Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
70Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
71Shewanella baltica OS155BProt GA1338655,342,89653.8155
72Shewanella baltica OS195BProt GA1338945,547,54453.8146
73Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
74Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
75Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
76Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
77Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
78Shewanella sp. MR-7BProt GA1390324,799,10952.1145
79Shewanella sp. MR-4BProt GA1390414,706,28752.1145
80Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
81Shewanella loihica PV-4BProt GA1390614,602,59446.3145
82Pseudomonas putida F1BProt GPs1390915,959,96438.11418
83Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
84Escherichia coli HSBProt GE1395914,643,53849.2141
85Escherichia coli E24377ABProt GE1396075,249,28849.4142
86Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
87Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
88Vibrio cholerae O395BProt GV1566724,132,31952.5143
89Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
90Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
91Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
92Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
93Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
94Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
95Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
96Escherichia coli 536BProt GE1623514,938,92049.5141
97Escherichia coli UTI89BProt GE1625925,179,97149.4141
98Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
99Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
100Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
101Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
102Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
103Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
104Escherichia coli APEC O1BProt GE1671835,497,65349.7141
105Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
106Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
107Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
108Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
109Pseudomonas putida W619BProt GPs1705315,774,33038.61415
110Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
111Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
112Serratia proteamaculans 568BProt GE1745925,495,65745.0142
113Enterobacter sp. 638BProt GE1746124,676,46147.1143
114Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
115Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
116Shewanella baltica OS185BProt GA1764325,312,91053.7146
117Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
118Xylella fastidiosa M12BProt GX1782312,475,13048.1121
119Shewanella baltica OS223BProt GA1798545,358,88453.7146
120Escherichia coli SE11BProt GE1805775,155,62649.3141
121Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
122Xylella fastidiosa M23BProt GX1845722,573,98748.3121
123Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
124Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
125Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
126Escherichia coli SE15BProt GE1905324,839,68349.3141
127Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
128Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
129Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
130Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
131Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
132Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
133Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
134Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
135Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
136Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
137Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
138Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
139Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
140Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
141Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
142Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
143Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
144Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
145Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
146Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
147Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
148Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
149Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
150Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
151Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
152Escherichia coli DH1BProt GE3003114,630,70749.2142
153Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
154Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
155Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
156Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
157Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
158Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
159Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
160Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
161Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
162Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
163Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
164Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
165Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
166Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
167Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
168Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
169Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
170Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
171Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
172Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
173Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
174Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
175Escherichia coli IAI1BProt GE3337314,700,56049.2131
176Escherichia coli S88BProt GE3337525,166,12149.4142
177Escherichia coli ED1aBProt GE3340915,209,54849.3142
178Escherichia coli IAI39BProt GE3341115,132,06849.4142
179Escherichia coli 55989BProt GE3341315,154,86249.3142
180Escherichia coli UMN026BProt GE3341535,358,20049.3152
181Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
182Shigella flexneri 2002017BProt GE3363964,894,49249.4131
183Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
184Escherichia coli BW2952BProt GE3377514,578,15949.2142
185Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
186Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
187Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
188Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
189Yersinia pestis Z176003BProt GE3654744,725,78852.3151
190Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
191Klebsiella variicola At-22BProt GE3770115,458,50542.4131
192Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
193Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
194Cronobacter turicensisBProt GE3996544,599,15542.7142
195Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
196Vibrio sp. Ex25BProt GV4050725,089,02555.1154
197Escherichia coli 042BProt GE4064725,355,32349.5152
198Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
199Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
200Escherichia coli IHE3034BProt GE4369315,108,38349.3131
201Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
202Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
203Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
204Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
205Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
206Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
207Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
208Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
209Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
210Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
211Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
212Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
213Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
214Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
215Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
216Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
217Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
218Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
219Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
220Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
221Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
222Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
223Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
224Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
225Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
226Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
227Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
228Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
229Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
230Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
231Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
232Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
233Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
234Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
235Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
236Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
237Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
238Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
239Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
240Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
241Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
242Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
243Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
244Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
245Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
246Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
247Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
248Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
249Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
250Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
251Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
252Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
253Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
254Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
255Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
256Vibrio cholerae O395328532N/AN/AN/AN/AN/A
257Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
258Yersinia pestis D106004365074172,20252.3N/AN/AN/A
259Yersinia pestis D182038365454175,31952.2N/AN/AN/A
260Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
261Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
262Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
263Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
264Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A

Acknowledgements:

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