Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
2Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
3Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
4Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
5Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
6Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
7Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
8Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
9Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
10Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
11Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
12Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
13Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
14Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
15Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
16Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
17Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
18Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
19Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
20Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
21Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
22Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
23Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
24Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
25Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
26Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
27Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
28Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
29Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
30Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
31Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
32Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
33Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
34Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
35Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
36Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
37Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
38Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
39Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
40Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
41Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
42Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
43Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
44Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
45Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
46Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
47Vibrio cholerae O395328532N/AN/AN/AN/AN/A
48Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
49Yersinia pestis D106004365074172,20252.3N/AN/AN/A
50Yersinia pestis D182038365454175,31952.2N/AN/AN/A
51Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
52Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
53Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
54Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
55Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
56Yersinia pestis CO92BProt GE3444,829,85552.4151
57Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
58Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
59Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
60Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
61Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
62Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
63Yersinia pestis KIM 10BProt GE28824,701,74552.3141
64Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
65Escherichia coli CFT073BProt GE31315,231,42849.5141
66Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
67Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
68Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
69Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
70Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
71Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
72Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
73Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
74Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
75Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
76Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
77Shigella boydii Sb227BProt GE1314624,646,52048.9141
78Escherichia coli HSBProt GE1395914,643,53849.2141
79Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
80Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
81Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
82Escherichia coli 536BProt GE1623514,938,92049.5141
83Escherichia coli UTI89BProt GE1625925,179,97149.4141
84Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
85Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
86Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
87Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
88Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
89Escherichia coli APEC O1BProt GE1671835,497,65349.7141
90Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
91Xylella fastidiosa M12BProt GX1782312,475,13048.1121
92Escherichia coli SE11BProt GE1805775,155,62649.3141
93Xylella fastidiosa M23BProt GX1845722,573,98748.3121
94Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
95Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
96Escherichia coli SE15BProt GE1905324,839,68349.3141
97Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
98Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
99Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
101Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
102Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
103Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
104Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
105Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
106Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
107Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
108Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
109Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
110Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
111Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
112Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
113Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
114Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
115Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
116Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
117Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
118Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
119Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
120Escherichia coli IAI1BProt GE3337314,700,56049.2131
121Shigella flexneri 2002017BProt GE3363964,894,49249.4131
122Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
123Yersinia pestis Z176003BProt GE3654744,725,78852.3151
124Klebsiella variicola At-22BProt GE3770115,458,50542.4131
125Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
126Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
127Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
128Escherichia coli IHE3034BProt GE4369315,108,38349.3131
129Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
130Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
131Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
132Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
133Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
134Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
135Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
136Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
137Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
138Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
139Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
140Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
141Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
142Shigella sonnei Ss046BProt GE1315155,055,31649.2142
143Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
144Escherichia coli E24377ABProt GE1396075,249,28849.4142
145Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
146Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
147Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
148Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
149Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
150Serratia proteamaculans 568BProt GE1745925,495,65745.0142
151Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
152Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
153Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
154Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
155Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
156Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
157Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
158Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
159Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
160Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
161Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
162Escherichia coli DH1BProt GE3003114,630,70749.2142
163Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
164Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
165Escherichia coli S88BProt GE3337525,166,12149.4142
166Escherichia coli ED1aBProt GE3340915,209,54849.3142
167Escherichia coli IAI39BProt GE3341115,132,06849.4142
168Escherichia coli 55989BProt GE3341315,154,86249.3142
169Escherichia coli UMN026BProt GE3341535,358,20049.3152
170Escherichia coli BW2952BProt GE3377514,578,15949.2142
171Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
172Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
173Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
174Cronobacter turicensisBProt GE3996544,599,15542.7142
175Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
176Escherichia coli 042BProt GE4064725,355,32349.5152
177Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
178Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
179Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
180Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
181Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
182Photobacterium profundum SS9BProt GV1312836,403,28058.3163
183Vibrio cholerae O395BProt GV1566724,132,31952.5143
184Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
185Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
186Enterobacter sp. 638BProt GE1746124,676,46147.1143
187Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
188Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
189Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
190Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
191Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
192Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
193Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
194Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
195Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
196Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
197Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
198Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
199Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
200Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
201Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
202Vibrio fischeri ES114BProt GV1298634,284,05061.6144
203Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
204Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
205Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
206Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
207Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
208Vibrio sp. Ex25BProt GV4050725,089,02555.1154
209Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
210Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
211Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
212Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
213Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
214Shewanella baltica OS155BProt GA1338655,342,89653.8155
215Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
216Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
217Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
218Shewanella sp. MR-7BProt GA1390324,799,10952.1145
219Shewanella sp. MR-4BProt GA1390414,706,28752.1145
220Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
221Shewanella loihica PV-4BProt GA1390614,602,59446.3145
222Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
223Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
224Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
225Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
226Shewanella baltica OS195BProt GA1338945,547,54453.8146
227Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
228Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
229Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
230Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
231Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
232Shewanella baltica OS185BProt GA1764325,312,91053.7146
233Shewanella baltica OS223BProt GA1798545,358,88453.7146
234Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
235Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
236Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
237Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
238Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
239Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
240Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
241Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
242Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
243Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
244Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
245Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
246Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
247Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
248Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
249Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
250Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
251Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
252Pseudomonas putida W619BProt GPs1705315,774,33038.61415
253Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
254Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
255Pseudomonas putida F1BProt GPs1390915,959,96438.11418
256Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
257Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
258Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
259Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
260Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
261Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
262Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
263Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
264Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433

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