Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
2Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
3Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
4Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
5Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
6Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
7Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
8Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
9Pseudomonas putida F1BProt GPs1390915,959,96438.11418
10Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
11Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
12Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
13Pseudomonas putida W619BProt GPs1705315,774,33038.61415
14Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
15Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
16Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
17Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
18Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
19Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
20Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
21Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
22Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
23Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
24Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
25Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
26Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
27Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
28Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
29Shewanella baltica OS195BProt GA1338945,547,54453.8146
30Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
31Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
32Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
33Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
34Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
35Shewanella baltica OS185BProt GA1764325,312,91053.7146
36Shewanella baltica OS223BProt GA1798545,358,88453.7146
37Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
38Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
39Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
40Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
41Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
42Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
43Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
44Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
45Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
46Shewanella baltica OS155BProt GA1338655,342,89653.8155
47Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
48Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
49Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
50Shewanella sp. MR-7BProt GA1390324,799,10952.1145
51Shewanella sp. MR-4BProt GA1390414,706,28752.1145
52Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
53Shewanella loihica PV-4BProt GA1390614,602,59446.3145
54Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
55Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
56Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
57Vibrio fischeri ES114BProt GV1298634,284,05061.6144
58Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
59Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
60Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
61Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
62Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
63Vibrio sp. Ex25BProt GV4050725,089,02555.1154
64Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
65Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
66Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
67Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
68Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
69Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
70Photobacterium profundum SS9BProt GV1312836,403,28058.3163
71Vibrio cholerae O395BProt GV1566724,132,31952.5143
72Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
73Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
74Enterobacter sp. 638BProt GE1746124,676,46147.1143
75Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
76Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
77Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
78Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
79Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
80Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
81Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
82Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
83Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
84Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
85Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
86Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
87Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
88Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
89Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
90Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
91Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
92Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
93Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
94Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
95Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
96Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
97Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
98Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
99Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
100Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
101Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
102Shigella sonnei Ss046BProt GE1315155,055,31649.2142
103Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
104Escherichia coli E24377ABProt GE1396075,249,28849.4142
105Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
106Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
107Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
108Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
109Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
110Serratia proteamaculans 568BProt GE1745925,495,65745.0142
111Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
112Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
113Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
114Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
115Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
116Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
117Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
118Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
119Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
120Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
121Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
122Escherichia coli DH1BProt GE3003114,630,70749.2142
123Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
124Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
125Escherichia coli S88BProt GE3337525,166,12149.4142
126Escherichia coli ED1aBProt GE3340915,209,54849.3142
127Escherichia coli IAI39BProt GE3341115,132,06849.4142
128Escherichia coli 55989BProt GE3341315,154,86249.3142
129Escherichia coli UMN026BProt GE3341535,358,20049.3152
130Escherichia coli BW2952BProt GE3377514,578,15949.2142
131Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
132Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
133Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
134Cronobacter turicensisBProt GE3996544,599,15542.7142
135Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
136Escherichia coli 042BProt GE4064725,355,32349.5152
137Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
138Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
139Yersinia pestis CO92BProt GE3444,829,85552.4151
140Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
141Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
142Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
143Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
144Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
145Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
146Yersinia pestis KIM 10BProt GE28824,701,74552.3141
147Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
148Escherichia coli CFT073BProt GE31315,231,42849.5141
149Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
150Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
151Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
152Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
153Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
154Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
155Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
156Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
157Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
158Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
159Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
160Shigella boydii Sb227BProt GE1314624,646,52048.9141
161Escherichia coli HSBProt GE1395914,643,53849.2141
162Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
163Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
164Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
165Escherichia coli 536BProt GE1623514,938,92049.5141
166Escherichia coli UTI89BProt GE1625925,179,97149.4141
167Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
168Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
169Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
170Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
171Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
172Escherichia coli APEC O1BProt GE1671835,497,65349.7141
173Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
174Xylella fastidiosa M12BProt GX1782312,475,13048.1121
175Escherichia coli SE11BProt GE1805775,155,62649.3141
176Xylella fastidiosa M23BProt GX1845722,573,98748.3121
177Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
178Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
179Escherichia coli SE15BProt GE1905324,839,68349.3141
180Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
181Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
182Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
183Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
184Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
185Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
186Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
187Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
188Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
189Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
190Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
191Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
192Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
193Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
194Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
195Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
196Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
197Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
198Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
199Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
200Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
201Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
202Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
203Escherichia coli IAI1BProt GE3337314,700,56049.2131
204Shigella flexneri 2002017BProt GE3363964,894,49249.4131
205Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
206Yersinia pestis Z176003BProt GE3654744,725,78852.3151
207Klebsiella variicola At-22BProt GE3770115,458,50542.4131
208Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
209Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
210Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
211Escherichia coli IHE3034BProt GE4369315,108,38349.3131
212Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
213Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
214Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
215Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
216Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
217Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
218Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
219Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
220Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
221Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
222Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
223Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
224Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
225Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
226Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
227Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
228Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
229Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
230Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
231Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
232Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
233Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
234Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
235Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
236Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
237Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
238Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
239Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
240Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
241Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
242Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
243Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
244Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
245Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
246Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
247Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
248Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
249Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
250Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
251Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
252Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
253Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
254Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
255Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
256Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
257Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
258Vibrio cholerae O395328532N/AN/AN/AN/AN/A
259Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
260Yersinia pestis D106004365074172,20252.3N/AN/AN/A
261Yersinia pestis D182038365454175,31952.2N/AN/AN/A
262Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
263Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
264Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A

Acknowledgements:

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