Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
2Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
3Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
4Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
5Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
6Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
7Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
8Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
9Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
10Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
11Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
12Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
13Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
14Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
15Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
16Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
17Escherichia coli CFT073BProt GE31315,231,42849.5141
18Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
19Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
20Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
21Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
22Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
23Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
24Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
25Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
26Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
27Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
28Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
29Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
30Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
31Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
32Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
33Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
34Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
35Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
36Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
37Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
38Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
39Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
40Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
41Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
42Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
43Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
44Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
45Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
46Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
47Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
48Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
49Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
50Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
51Shewanella sp. MR-4BProt GA1390414,706,28752.1145
52Shewanella loihica PV-4BProt GA1390614,602,59446.3145
53Pseudomonas putida F1BProt GPs1390915,959,96438.11418
54Escherichia coli HSBProt GE1395914,643,53849.2141
55Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
56Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
57Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
58Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
59Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
60Escherichia coli 536BProt GE1623514,938,92049.5141
61Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
62Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
63Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
64Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
65Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
66Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
67Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
68Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
69Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
70Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
71Pseudomonas putida W619BProt GPs1705315,774,33038.61415
72Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
73Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
74Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
75Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
76Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
77Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
78Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
79Xylella fastidiosa M12BProt GX1782312,475,13048.1121
80Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
81Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
82Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
83Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
84Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
85Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
86Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
87Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
88Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
89Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
90Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
91Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
92Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
93Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
94Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
95Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
96Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
97Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
98Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
99Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
100Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
101Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
102Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
103Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
104Escherichia coli DH1BProt GE3003114,630,70749.2142
105Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
106Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
107Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
108Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
109Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
110Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
111Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
112Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
113Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
114Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
115Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
116Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
117Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
118Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
119Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
120Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
121Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
122Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
123Escherichia coli IAI1BProt GE3337314,700,56049.2131
124Escherichia coli ED1aBProt GE3340915,209,54849.3142
125Escherichia coli IAI39BProt GE3341115,132,06849.4142
126Escherichia coli 55989BProt GE3341315,154,86249.3142
127Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
128Escherichia coli BW2952BProt GE3377514,578,15949.2142
129Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
130Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
131Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
132Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
133Klebsiella variicola At-22BProt GE3770115,458,50542.4131
134Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
135Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
136Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
137Escherichia coli IHE3034BProt GE4369315,108,38349.3131
138Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
139Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
140Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
141Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
142Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
143Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
144Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
145Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
146Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
147Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
148Yersinia pestis KIM 10BProt GE28824,701,74552.3141
149Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
150Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
151Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
152Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
153Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
154Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
155Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
156Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
157Shigella boydii Sb227BProt GE1314624,646,52048.9141
158Shewanella sp. MR-7BProt GA1390324,799,10952.1145
159Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
160Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
161Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
162Vibrio cholerae O395BProt GV1566724,132,31952.5143
163Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
164Escherichia coli UTI89BProt GE1625925,179,97149.4141
165Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
166Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
167Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
168Serratia proteamaculans 568BProt GE1745925,495,65745.0142
169Enterobacter sp. 638BProt GE1746124,676,46147.1143
170Shewanella baltica OS185BProt GA1764325,312,91053.7146
171Xylella fastidiosa M23BProt GX1845722,573,98748.3121
172Escherichia coli SE15BProt GE1905324,839,68349.3141
173Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
174Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
175Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
176Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
177Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
178Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
179Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
180Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
181Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
182Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
183Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
184Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
185Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
186Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
187Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
188Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
189Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
190Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
191Vibrio cholerae O395328532N/AN/AN/AN/AN/A
192Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
193Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
194Escherichia coli S88BProt GE3337525,166,12149.4142
195Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
196Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
197Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
198Vibrio sp. Ex25BProt GV4050725,089,02555.1154
199Escherichia coli 042BProt GE4064725,355,32349.5152
200Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
201Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
202Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
203Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
204Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
205Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
206Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
207Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
208Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
209Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
210Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
211Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
212Vibrio fischeri ES114BProt GV1298634,284,05061.6144
213Photobacterium profundum SS9BProt GV1312836,403,28058.3163
214Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
215Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
216Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
217Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
218Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
219Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
220Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
221Escherichia coli APEC O1BProt GE1671835,497,65349.7141
222Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
223Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
224Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
225Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
226Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
227Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
228Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
229Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
230Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
231Escherichia coli UMN026BProt GE3341535,358,20049.3152
232Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
233Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
234Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
235Yersinia pestis CO92BProt GE3444,829,85552.4151
236Shewanella baltica OS195BProt GA1338945,547,54453.8146
237Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
238Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
239Shewanella baltica OS223BProt GA1798545,358,88453.7146
240Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
241Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
242Yersinia pestis D106004365074172,20252.3N/AN/AN/A
243Yersinia pestis D182038365454175,31952.2N/AN/AN/A
244Yersinia pestis Z176003BProt GE3654744,725,78852.3151
245Cronobacter turicensisBProt GE3996544,599,15542.7142
246Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
247Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
248Shigella sonnei Ss046BProt GE1315155,055,31649.2142
249Shewanella baltica OS155BProt GA1338655,342,89653.8155
250Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
251Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
252Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
253Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
254Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
255Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
256Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
257Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
258Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
259Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
260Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
261Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
262Shigella flexneri 2002017BProt GE3363964,894,49249.4131
263Escherichia coli E24377ABProt GE1396075,249,28849.4142
264Escherichia coli SE11BProt GE1805775,155,62649.3141

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