Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATZ-DNAA-DNA
1Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.511
2Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.511
3Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.411
4Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.811
5Yersinia pestis Z176003BProt GE3654744,725,78852.311
6Yersinia pestis Pestoides FBProt GE1670034,725,86252.311
7Yersinia pestis Nepal516BProt GE1664634,646,28652.411
8Yersinia pestis KIM 10BProt GE28824,701,74552.311
9Yersinia pestis D182038365454175,31952.212
10Yersinia pestis D106004365074172,20252.312
11Yersinia pestis CO92BProt GE3444,829,85552.411
12Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.311
13Yersinia pestis AntiquaBProt GE1664544,879,83652.311
14Yersinia pestis AngolaBProt GE1606734,687,01452.411
15Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.811
16Xylella fastidiosa Temecula1BProt GX28522,521,14848.221
17Xylella fastidiosa M23BProt GX1845722,573,98748.321
18Xylella fastidiosa M12BProt GX1782312,475,13048.121
19Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/A
20Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.430
21Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.340
22Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.340
23Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.440
24Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.040
25Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.940
26Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.040
27Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.340
28Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.504
29Vibrio vulnificus YJ016BProt GV143035,260,08653.311
30Vibrio vulnificus CMCP6BProt GV34925,126,79753.311
31Vibrio splendidus LGP32BProt GV3281524,974,82156.111
32Vibrio sp. Ex25BProt GV4050725,089,02555.111
33Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.611
34Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.611
35Vibrio fischeri MJ11BProt GV1939334,503,33661.812
36Vibrio fischeri ES114BProt GV1298634,284,05061.612
37Vibrio cholerae O395BProt GV1566724,132,31952.511
38Vibrio cholerae O395328532N/AN/AN/AN/A
39Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.511
40Vibrio cholerae MJ-1236BProt GV3355524,236,36852.711
41Vibrio cholerae M66-2BProt GV3285123,938,90552.411
42Tolumonas auensis DSM 9187BProt GA3387313,471,29251.021
43Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.911
44Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.521
45Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.911
46Teredinibacter turnerae T7901BProt GA3083915,193,16449.111
47Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.730
48Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.730
49Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.521
50Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.521
51Shigella sonnei Ss046BProt GE1315155,055,31649.211
52Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.111
53Shigella flexneri 2a str. 301BProt GE31024,828,82149.311
54Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.111
55Shigella flexneri 2002017BProt GE3363964,894,49249.411
56Shigella dysenteriae Sd197BProt GE1314534,560,91149.011
57Shigella boydii Sb227BProt GE1314624,646,52048.911
58Shigella boydii CDC 3083-94BProt GE1563764,874,65949.011
59Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.311
60Shewanella violacea DSS12347391N/AN/AN/AN/A
61Shewanella sp. W3-18-1BProt GA1390214,708,38055.411
62Shewanella sp. MR-7BProt GA1390324,799,10952.111
63Shewanella sp. MR-4BProt GA1390414,706,28752.111
64Shewanella sp. ANA-3BProt GA1390525,251,14652.111
65Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.911
66Shewanella putrefaciens CN-32BProt GA1339314,659,22055.511
67Shewanella piezotolerans WP3BProt GA1767515,396,47656.711
68Shewanella oneidensis MR-1BProt GA33525,131,41654.111
69Shewanella loihica PV-4BProt GA1390614,602,59446.311
70Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.411
71Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.411
72Shewanella denitrificans OS217BProt GA1339014,545,90654.911
73Shewanella baltica OS223BProt GA1798545,358,88453.711
74Shewanella baltica OS195BProt GA1338945,547,54453.811
75Shewanella baltica OS185BProt GA1764325,312,91053.711
76Shewanella baltica OS155BProt GA1338655,342,89653.811
77Shewanella amazonensis SB2BBProt GA1338514,306,14246.411
78Serratia proteamaculans 568BProt GE1745925,495,65745.021
79Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.811
80Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.811
81Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/A
82Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.911
83Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.111
84Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.811
85Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.811
86Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.911
87Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.821
88Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.821
89Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.811
90Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.911
91Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.811
92Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.811
93Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.911
94Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.911
95Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.011
96Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.611
97Saccharophagus degradans 2-40BProt GA31615,057,53154.211
98Psychromonas ingrahamii 37BProt GA1618714,559,59859.911
99Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.211
100Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.811
101Psychrobacter arcticus 273-4BProt GPs963312,650,70157.211
102Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.721
103Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.821
104Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.120
105Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.121
106Pseudomonas putida W619BProt GPs1705315,774,33038.620
107Pseudomonas putida KT2440BProt GPs26716,181,86338.521
108Pseudomonas putida GB-1BProt GPs1762916,078,43038.120
109Pseudomonas putida F1BProt GPs1390915,959,96438.120
110Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.921
111Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.521
112Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.711
113Pseudomonas entomophila L48BProt GPs1680015,888,78035.820
114Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.711
115Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.421
116Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.621
117Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.711
118Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.911
119Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.411
120Proteus mirabilis HI4320BProt GE1262424,099,89561.112
121Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.211
122Photorhabdus asymbioticaBProt GE3057725,094,13857.911
123Photobacterium profundum SS9BProt GV1312836,403,28058.311
124Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.511
125Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.121
126Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.021
127Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.612
128Pantoea ananatis LMG 20103BProt GE4308514,690,29846.321
129Nitrosococcus watsoni C-113BProt GC4033133,373,28649.912
130Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.712
131Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.402
132Moraxella catarrhalis RH4BProt GPs4686911,863,28658.310
133Methylococcus capsulatus str. BathBProt GM2113,304,56136.411
134Marinomonas sp. MWYL1BProt GO1744515,100,34457.411
135Marinobacter aquaeolei VT8BProt GA1323934,779,76243.111
136Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.511
137Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.712
138Legionella pneumophila str. ParisBProt GL1312723,635,49561.712
139Legionella pneumophila str. LensBProt GL1312623,405,51961.612
140Legionella pneumophila str. CorbyBProt GL1749113,576,47061.512
141Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.612
142Legionella longbeachae NSW150BProt GL3957924,149,15862.912
143Klebsiella variicola At-22BProt GE3770115,458,50542.411
144Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.911
145Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.611
146Klebsiella pneumoniae 342BProt GE2847135,920,25743.111
147Kangiella koreensis DSM 16069BProt GK2944312,852,07356.311
148Idiomarina loihiensis L2TRBProt GA1079012,839,31853.011
149Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.311
150Halorhodospira halophila SL1BProt GC1576712,678,45232.011
151Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.111
152Haemophilus somnus 2336BProt GPa38812,263,85762.612
153Haemophilus somnus 129PTBProt GPa32222,012,87862.812
154Haemophilus parasuis SH0165BProt GPa3109912,269,15660.012
155Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.812
156Haemophilus influenzae PittGGBProt GPa1640111,887,19262.012
157Haemophilus influenzae PittEEBProt GPa1640011,813,03362.012
158Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.812
159Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.811
160Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.711
161Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.711
162Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.711
163Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.811
164Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.811
165Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.811
166Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.811
167Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.811
168Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.411
169Francisella novicida U112BProt GT1608811,910,03167.511
170Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.111
171Escherichia coli UTI89BProt GE1625925,179,97149.411
172Escherichia coli UMN026BProt GE3341535,358,20049.311
173Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.211
174Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.211
175Escherichia coli SMS-3-5BProt GE1946955,215,37749.511
176Escherichia coli SE15BProt GE1905324,839,68349.311
177Escherichia coli SE11BProt GE1805775,155,62649.311
178Escherichia coli S88BProt GE3337525,166,12149.411
179Escherichia coli RS218VDCP19411140,20753.112
180Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.511
181Escherichia coli O26:H11 str. 11368325095158,29150.612
182Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.511
183Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.511
184Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.611
185Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.511
186Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.511
187Escherichia coli O111:H- str. 11128325136395,00452.012
188Escherichia coli O103:H2 str. 1200932511275,54650.912
189Escherichia coli IHE3034BProt GE4369315,108,38349.311
190Escherichia coli IAI39BProt GE3341115,132,06849.411
191Escherichia coli IAI1BProt GE3337314,700,56049.211
192Escherichia coli HSBProt GE1395914,643,53849.211
193Escherichia coli ED1aBProt GE3340915,209,54849.311
194Escherichia coli E24377ABProt GE1396075,249,28849.411
195Escherichia coli DH1BProt GE3003114,630,70749.211
196Escherichia coli CFT073BProt GE31315,231,42849.511
197Escherichia coli BW2952BProt GE3377514,578,15949.211
198Escherichia coli BL21(DE3)BProt GE2071314,558,95349.211
199Escherichia coli BL21(DE3)BProt GE2896514,557,04149.211
200Escherichia coli BL21(DE3)BProt GE3068114,570,93849.211
201Escherichia coli B str. REL606182811N/AN/AN/AN/A
202Escherichia coli ATCC 8739BProt GE1808314,746,21849.111
203Escherichia coli APEC O1BProt GE1671835,497,65349.711
204Escherichia coli 55989BProt GE3341315,154,86249.311
205Escherichia coli 536BProt GE1623514,938,92049.511
206Escherichia coli 042BProt GE4064725,355,32349.511
207Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.621
208Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.621
209Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.621
210Erwinia amylovora CFBP1430BProt GE4680523,833,83246.421
211Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.421
212Enterobacter sp. 638BProt GE1746124,676,46147.111
213Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.411
214Edwardsiella tarda EIB202BProt GE2853923,804,16640.321
215Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.621
216Dickeya zeae Ech1591BProt GE3129514,813,85445.521
217Dickeya dadantii Ech703BProt GE3306914,679,45045.021
218Dickeya dadantii Ech586BProt GE3366714,818,39446.421
219Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.621
220Cronobacter turicensisBProt GE3996544,599,15542.721
221Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.321
222Coxiella burnetii RSA 493BProt GL4122,032,67457.413
223Coxiella burnetii RSA 331BProt GL1679122,053,74457.313
224Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.613
225Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.413
226Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.412
227Colwellia psychrerythraea 34HBProt GA27515,373,18062.011
228Citrobacter rodentium ICC168BProt GE3468545,444,28345.511
229Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.211
230Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.121
231Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.011
232Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.411
233Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.011
234Candidatus Riesia pediculicola USDABProt GE290652582,12771.405
235Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.513
236Candidatus Carsonella ruddii PVBProt GC179771159,66283.405
237Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.421
238Candidatus Blochmannia floridanusBProt GE4431705,55772.621
239Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.713
240Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.714
241Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.815
242Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.712
243Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.713
244Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.821
245Azotobacter vinelandii DJBProt GPs1615,365,31834.311
246Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.111
247Allochromatium vinosum DSM 180BProt GC3254733,669,07435.820
248Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.511
249Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.012
250Alcanivorax borkumensis SK2BProt GO1300513,120,14345.311
251Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.811
252Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.711
253Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.811
254Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.411
255Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.111
256Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.811
257Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.811
258Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.711
259Acinetobacter sp. DR1BProt GPs4610514,152,54361.311
260Acinetobacter sp. ADP1BProt GPs1235213,598,62159.611
261Acinetobacter baumannii AYEBProt GPs2892154,048,73560.711
262Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.011
263Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.811
264Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.211

Acknowledgements:

This research is funded by:

Developed by: