Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
2Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
3Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
4Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
5Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
6Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
7Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
8Yersinia pestis CO92BProt GE3444,829,85552.4151
9Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
10Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
11Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
12Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
13Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
14Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
15Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
16Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
17Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
18Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
19Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
20Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
21Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
22Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
23Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
24Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
25Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
26Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
27Yersinia pestis KIM 10BProt GE28824,701,74552.3141
28Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
29Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
30Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
31Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
32Escherichia coli CFT073BProt GE31315,231,42849.5141
33Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
34Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
35Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
36Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
37Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
38Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
39Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
40Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
41Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
42Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
43Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
44Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
45Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
46Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
47Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
48Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
49Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
50Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
51Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
52Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
53Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
54Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
55Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
56Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
57Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
58Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
59Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
60Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
61Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
62Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
63Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
64Vibrio fischeri ES114BProt GV1298634,284,05061.6144
65Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
66Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
67Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
68Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
69Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
70Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
71Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
72Photobacterium profundum SS9BProt GV1312836,403,28058.3163
73Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
74Shigella boydii Sb227BProt GE1314624,646,52048.9141
75Shigella sonnei Ss046BProt GE1315155,055,31649.2142
76Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
77Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
78Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
79Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
80Shewanella baltica OS155BProt GA1338655,342,89653.8155
81Shewanella baltica OS195BProt GA1338945,547,54453.8146
82Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
83Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
84Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
85Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
86Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
87Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
88Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
89Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
90Shewanella sp. MR-7BProt GA1390324,799,10952.1145
91Shewanella sp. MR-4BProt GA1390414,706,28752.1145
92Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
93Shewanella loihica PV-4BProt GA1390614,602,59446.3145
94Pseudomonas putida F1BProt GPs1390915,959,96438.11418
95Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
96Escherichia coli HSBProt GE1395914,643,53849.2141
97Escherichia coli E24377ABProt GE1396075,249,28849.4142
98Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
99Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
100Vibrio cholerae O395BProt GV1566724,132,31952.5143
101Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
102Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
103Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
104Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
105Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
106Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
107Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
108Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
109Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
110Escherichia coli 536BProt GE1623514,938,92049.5141
111Escherichia coli UTI89BProt GE1625925,179,97149.4141
112Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
113Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
114Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
115Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
116Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
117Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
118Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
119Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
120Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
121Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
122Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
123Escherichia coli APEC O1BProt GE1671835,497,65349.7141
124Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
125Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
126Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
127Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
128Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
129Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
130Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
131Pseudomonas putida W619BProt GPs1705315,774,33038.61415
132Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
133Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
134Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
135Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
136Serratia proteamaculans 568BProt GE1745925,495,65745.0142
137Enterobacter sp. 638BProt GE1746124,676,46147.1143
138Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
139Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
140Shewanella baltica OS185BProt GA1764325,312,91053.7146
141Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
142Xylella fastidiosa M12BProt GX1782312,475,13048.1121
143Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
144Shewanella baltica OS223BProt GA1798545,358,88453.7146
145Escherichia coli SE11BProt GE1805775,155,62649.3141
146Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
147Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
148Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
149Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
150Xylella fastidiosa M23BProt GX1845722,573,98748.3121
151Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
152Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
153Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
154Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
155Escherichia coli SE15BProt GE1905324,839,68349.3141
156Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
157Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
158Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
159Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
160Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
161Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
162Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
163Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
164Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
165Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
166Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
167Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
168Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
169Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
170Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
171Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
172Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
173Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
174Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
175Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
176Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
177Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
178Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
179Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
180Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
181Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
182Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
183Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
184Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
185Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
186Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
187Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
188Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
189Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
190Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
191Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
192Escherichia coli DH1BProt GE3003114,630,70749.2142
193Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
194Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
195Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
196Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
197Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
198Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
199Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
200Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
201Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
202Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
203Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
204Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
205Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
206Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
207Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
208Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
209Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
210Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
211Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
212Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
213Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
214Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
215Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
216Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
217Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
218Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
219Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
220Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
221Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
222Vibrio cholerae O395328532N/AN/AN/AN/AN/A
223Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
224Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
225Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
226Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
227Escherichia coli IAI1BProt GE3337314,700,56049.2131
228Escherichia coli S88BProt GE3337525,166,12149.4142
229Escherichia coli ED1aBProt GE3340915,209,54849.3142
230Escherichia coli IAI39BProt GE3341115,132,06849.4142
231Escherichia coli 55989BProt GE3341315,154,86249.3142
232Escherichia coli UMN026BProt GE3341535,358,20049.3152
233Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
234Shigella flexneri 2002017BProt GE3363964,894,49249.4131
235Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
236Escherichia coli BW2952BProt GE3377514,578,15949.2142
237Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
238Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
239Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
240Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
241Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
242Yersinia pestis D106004365074172,20252.3N/AN/AN/A
243Yersinia pestis D182038365454175,31952.2N/AN/AN/A
244Yersinia pestis Z176003BProt GE3654744,725,78852.3151
245Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
246Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
247Klebsiella variicola At-22BProt GE3770115,458,50542.4131
248Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
249Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
250Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
251Cronobacter turicensisBProt GE3996544,599,15542.7142
252Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
253Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
254Vibrio sp. Ex25BProt GV4050725,089,02555.1154
255Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A
256Escherichia coli 042BProt GE4064725,355,32349.5152
257Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
258Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
259Escherichia coli IHE3034BProt GE4369315,108,38349.3131
260Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
261Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
262Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
263Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
264Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A

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