Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

Available Tables
RowOrganismTax GroupNCBI Project IDRepliconsTotal Size (bp)% ATSigma 54
Factors
Sigma 70
Factors
ECF
Factors
1Escherichia coli RS218VDCP19411140,20753.1N/AN/AN/A
2Xanthomonas campestris pv. campestris str. 8004BProt GX1515,148,70835.023N/A
3Xylella fastidiosa Temecula1BProt GX28522,521,14848.2121
4Xanthomonas campestris pv. campestris str. ATCC 33913BProt GX29615,076,18834.923N/A
5Xanthomonas axonopodis pv. citri str. 306BProt GX29735,274,17435.3238
6Xanthomonas oryzae pv. oryzae KACC10331BProt GX1293114,941,43936.3236
7Xanthomonas campestris pv. vesicatoria str. 85-10BProt GX1364955,420,15235.4239
8Xanthomonas oryzae pv. oryzae MAFF 311018BProt GX1629714,940,21736.3236
9Stenotrophomonas maltophilia R551-3BProt GX1710714,573,96933.72319
10Xylella fastidiosa M12BProt GX1782312,475,13048.1121
11Xylella fastidiosa M23BProt GX1845722,573,98748.3121
12Xanthomonas oryzae pv. oryzae PXO99ABProt GX2812715,240,07536.4346
13Xanthomonas campestris pv. campestris str. B100BProt GX2980115,079,00235.0239
14Stenotrophomonas maltophilia K279aBProt GX3035114,851,12633.72318
15Vibrio cholerae O1 biovar El Tor str. N16961BProt GV3624,033,46452.5143
16Vibrio vulnificus CMCP6BProt GV34925,126,79753.3143
17Vibrio parahaemolyticus RIMD 2210633BProt GV36025,165,77054.6154
18Vibrio vulnificus YJ016BProt GV143035,260,08653.3143
19Vibrio fischeri ES114BProt GV1298634,284,05061.6144
20Photobacterium profundum SS9BProt GV1312836,403,28058.3163
21Vibrio cholerae O395BProt GV1566724,132,31952.5143
22Vibrio fischeri MJ11BProt GV1939334,503,33661.8154
23Vibrio harveyi ATCC BAA-1116BProt GV1985736,058,37754.6165
24Aliivibrio salmonicida LFI1238BProt GV3070364,655,66061.0151
25Vibrio splendidus LGP32BProt GV3281524,974,82156.1154
26Vibrio cholerae M66-2BProt GV3285123,938,90552.4143
27Vibrio cholerae MJ-1236BProt GV3355524,236,36852.7143
28Vibrio sp. Ex25BProt GV4050725,089,02555.1154
29Francisella tularensis subsp. tularensis SCHU S4BProt GT911,892,81967.7N/A2N/A
30Thiomicrospira crunogena XCL-2BProt GT1301812,427,73456.9132
31Francisella novicida U112BProt GT1608811,910,03167.5N/A2N/A
32Francisella tularensis subsp. holarcticaBProt GT1642111,895,99467.8N/A2N/A
33Francisella tularensis subsp. holarctica OSU18BProt GT1726511,895,72767.8N/A2N/A
34Francisella tularensis subsp. tularensis WY96-3418BProt GT1845911,898,47667.7N/A2N/A
35Francisella tularensis subsp. mediasiatica FSC147BProt GT1957111,893,88667.8N/A2N/A
36Francisella tularensis subsp. holarctica FTNF002-00BProt GT2019711,890,90967.8N/A2N/A
37Francisella philomiragia subsp. philomiragia ATCC 25017BProt GT2785322,049,71167.4N/A2N/A
38Francisella tularensis subsp. holarctica OSU18BProt GT3202511,895,72767.8N/AN/AN/A
39Francisella tularensis subsp. tularensis NE061598BProt GT3828911,892,68167.7N/A2N/A
40Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)BProt GS1684111,160,78266.0N/A2N/A
41Candidatus Vesicomyosocius okutanii HABProt GS1826711,022,15468.4N/A2N/A
42Pseudomonas fluorescens Pf0-1BProt GPs1216,438,40539.51421
43Azotobacter vinelandii DJBProt GPs1615,365,31834.31416
44Pseudomonas putida KT2440BProt GPs26716,181,86338.51419
45Pseudomonas syringae pv. syringae B728aBProt GPs32316,093,69840.814N/A
46Pseudomonas fluorescens Pf-5BProt GPs32717,074,89336.71428
47Pseudomonas aeruginosa PAO1BProt GPs33116,264,40433.41419
48Pseudomonas syringae pv. tomato str. DC3000BProt GPs35936,538,26041.714N/A
49Pseudomonas aeruginosa UCBPP-PA14BProt GPs38616,537,64833.714N/A
50Psychrobacter arcticus 273-4BProt GPs963312,650,70157.212N/A
51Acinetobacter sp. ADP1BProt GPs1235213,598,62159.6125
52Pseudomonas syringae pv. phaseolicola 1448ABProt GPs1241636,112,44842.1149
53Pseudomonas putida F1BProt GPs1390915,959,96438.11418
54Psychrobacter cryohalolentis K5BProt GPs1392023,101,09757.812N/A
55Psychrobacter sp. PRwf-1BProt GPs1575932,995,04955.212N/A
56Pseudomonas aeruginosa PA7BProt GPs1672016,588,33933.61417
57Pseudomonas entomophila L48BProt GPs1680015,888,78035.814N/A
58Pseudomonas stutzeri A1501BProt GPs1681714,567,41836.1146
59Pseudomonas putida W619BProt GPs1705315,774,33038.61415
60Pseudomonas putida GB-1BProt GPs1762916,078,43038.11433
61Acinetobacter baumannii AB0057BProt GPs2111124,059,24260.8122
62Cellvibrio japonicus Ueda107BProt GPs2832914,576,57348.0148
63Acinetobacter baumannii AYEBProt GPs2892154,048,73560.7121
64Acinetobacter baumannii AB307-0294BProt GPs3099313,760,98161.0121
65Pseudomonas aeruginosa LESB58BProt GPs3110116,601,75733.71419
66Pseudomonas fluorescens SBW25BProt GPs3122927,147,63339.91625
67Acinetobacter sp. DR1BProt GPs4610514,152,54361.3124
68Moraxella catarrhalis RH4BProt GPs4686911,863,28658.3N/A2N/A
69Haemophilus ducreyi 35000HPBProt GPa3811,698,95561.8N/A22
70Pasteurella multocida subsp. multocida str. Pm70BProt GPa3912,257,48759.6N/A22
71Haemophilus influenzae Rd KW20BProt GPa21911,830,13861.8N/A22
72Haemophilus somnus 129PTBProt GPa32222,012,87862.8N/A22
73Haemophilus somnus 2336BProt GPa38812,263,85762.6N/A22
74Haemophilus influenzae 86-028NPBProt GPa1175211,913,42861.8N/A22
75Mannheimia succiniciproducens MBEL55EBProt GPa1306812,314,07857.5N/A21
76Actinobacillus succinogenes 130ZBProt GPa1337012,319,66355.1N/A22
77Haemophilus influenzae PittEEBProt GPa1640011,813,03362.0N/A22
78Haemophilus influenzae PittGGBProt GPa1640111,887,19262.0N/A22
79Actinobacillus pleuropneumoniae L20BProt GPa1822112,274,48258.7N/A22
80Actinobacillus pleuropneumoniae serovar 3 str. JL03BProt GPa1913512,242,06258.8N/A22
81Actinobacillus pleuropneumoniae serovar 7 str. AP76BProt GPa2990942,345,43558.8N/A22
82Haemophilus parasuis SH0165BProt GPa3109912,269,15660.0N/A21
83Aggregatibacter aphrophilus NJ8700BProt GPa3657912,313,03557.8N/A22
84Aggregatibacter actinomycetemcomitans D11S-1BProt GPa4010742,204,66555.7N/A22
85Chromohalobacter salexigens DSM 3043BProt GO1263613,696,64936.1143
86Alcanivorax borkumensis SK2BProt GO1300513,120,14345.3122
87Hahella chejuensis KCTC 2396BProt GO1606417,215,26746.1146
88Marinomonas sp. MWYL1BProt GO1744515,100,34457.4146
89Methylococcus capsulatus str. BathBProt GM2113,304,56136.4121
90Legionella pneumophila subsp. pneumophila str. Philadelphia 1BProt GL2213,397,75461.7141
91Coxiella burnetii RSA 493BProt GL4122,032,67457.4N/A3N/A
92Legionella pneumophila str. LensBProt GL1312623,405,51961.6141
93Legionella pneumophila str. ParisBProt GL1312723,635,49561.7141
94Coxiella burnetii Dugway 5J108-111BProt GL1672122,212,93757.6N/A3N/A
95Coxiella burnetii RSA 331BProt GL1679122,053,74457.3N/A3N/A
96Legionella pneumophila str. CorbyBProt GL1749113,576,47061.5141
97Legionella pneumophila 2300/99 AlcoyBProt GL1874313,516,33461.6141
98Coxiella burnetii CbuG_Q212BProt GL1913712,008,87057.4N/A3N/A
99Coxiella burnetii CbuK_Q154BProt GL1913922,102,38057.4N/A3N/A
100Legionella longbeachae NSW150BProt GL3957924,149,15862.9141
101Kangiella koreensis DSM 16069BProt GK2944312,852,07356.312N/A
102Klebsiella pneumoniae subsp. pneumoniae MGH 78578BProt GE3165,694,89442.9132
103Yersinia pestis CO92BProt GE3444,829,85552.4151
104Yersinia enterocolitica subsp. enterocolitica 8081BProt GE19024,683,62052.8143
105Escherichia coli str. K-12 substr. MG1655BProt GE22514,639,67549.2142
106Escherichia coli O157:H7 str. SakaiBProt GE22635,594,47749.5141
107Salmonella enterica subsp. enterica serovar Typhi str. CT18BProt GE23635,133,71348.1141
108Salmonella enterica subsp. enterica serovar Typhimurium str. LT2BProt GE24124,951,37147.8141
109Buchnera aphidicola str. Bp (Baizongia pistaciae)BProt GE2562618,37974.7N/A2N/A
110Escherichia coli O157:H7 EDL933BProt GE25925,620,52249.5141
111Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisBProt GE2742703,00477.5N/A3N/A
112Yersinia pestis KIM 10BProt GE28824,701,74552.3141
113Shigella flexneri 2a str. 301BProt GE31024,828,82149.3131
114Buchnera aphidicola str. Sg (Schizaphis graminum)BProt GE3121641,45474.7N/A2N/A
115Escherichia coli CFT073BProt GE31315,231,42849.5141
116Pectobacterium atrosepticum SCRI1043BProt GE35015,064,01949.0148
117Salmonella enterica subsp. enterica serovar Typhi str. Ty2BProt GE37114,791,96147.9141
118Shigella flexneri 2a str. 2457TBProt GE40814,599,35449.1121
119Candidatus Blochmannia floridanusBProt GE4431705,55772.6N/A2N/A
120Photorhabdus luminescens subsp. laumondii TTO1BProt GE960515,688,98757.2145
121Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67BProt GE961834,944,00047.9141
122Yersinia pestis biovar Microtus str. 91001BProt GE1063854,803,21752.3151
123Proteus mirabilis HI4320BProt GE1262424,099,89561.1142
124Citrobacter koseri ATCC BAA-895BProt GE1271634,735,35746.2152
125Cronobacter sakazakii ATCC BAA-894BProt GE1272034,530,77743.3131
126Yersinia pseudotuberculosis IP 32953BProt GE1295034,840,89852.4151
127Salmonella enterica subsp. arizonae serovar 62:z4,z23:--BProt GE1303014,600,80048.6141
128Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150BProt GE1308614,585,22947.8141
129Shigella dysenteriae Sd197BProt GE1314534,560,91149.0142
130Shigella boydii Sb227BProt GE1314624,646,52048.9141
131Shigella sonnei Ss046BProt GE1315155,055,31649.2142
132Candidatus Blochmannia pennsylvanicus str. BPENBProt GE138751791,65470.4N/A2N/A
133Escherichia coli HSBProt GE1395914,643,53849.2141
134Escherichia coli E24377ABProt GE1396075,249,28849.4142
135Shigella boydii CDC 3083-94BProt GE1563764,874,65949.0121
136Yersinia pestis AngolaBProt GE1606734,687,01452.4N/AN/A1
137Yersinia pseudotuberculosis IP 31758BProt GE1607034,935,12552.8151
138Escherichia coli 536BProt GE1623514,938,92049.5141
139Escherichia coli UTI89BProt GE1625925,179,97149.4141
140Sodalis glossinidius str. 'morsitans'BProt GE1630944,292,50245.5131
141Buchnera aphidicola str. Cc (Cinara cedri)BProt GE163722422,43479.8N/A2N/A
142Shigella flexneri 5 str. 8401BProt GE1637514,574,28449.1141
143Yersinia pestis AntiquaBProt GE1664544,879,83652.3151
144Yersinia pestis Nepal516BProt GE1664634,646,28652.4141
145Yersinia pestis Pestoides FBProt GE1670034,725,86252.3141
146Escherichia coli APEC O1BProt GE1671835,497,65349.7141
147Serratia proteamaculans 568BProt GE1745925,495,65745.0142
148Enterobacter sp. 638BProt GE1746124,676,46147.1143
149Escherichia coli SE11BProt GE1805775,155,62649.3141
150Escherichia coli ATCC 8739BProt GE1808314,746,21849.1152
151Salmonella enterica subsp. enterica serovar Newport str. SL254BProt GE1874735,007,71947.8141
152Escherichia coli SE15BProt GE1905324,839,68349.3141
153Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633BProt GE1945934,823,88747.8141
154Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853BProt GE1946724,917,45947.9141
155Escherichia coli SMS-3-5BProt GE1946955,215,37749.5151
156Salmonella enterica subsp. enterica serovar Heidelberg str. SL476BProt GE2004534,983,51547.9141
157Salmonella enterica subsp. enterica serovar Agona str. SL483BProt GE2006324,836,63848.0141
158Escherichia coli str. K-12 substr. DH10BBProt GE2007914,686,13749.2142
159Erwinia tasmaniensis Et1/99BProt GE2058564,067,86446.6144
160Escherichia coli BL21(DE3)BProt GE2071314,558,95349.2132
161Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594BProt GE2099324,888,49447.8141
162Klebsiella pneumoniae NTUH-K2044BProt GE2106925,472,67242.6132
163Escherichia coli O157:H7 str. EC4115BProt GE2773935,704,17149.6141
164Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7BProt GE2780314,858,88747.9132
165Klebsiella pneumoniae 342BProt GE2847135,920,25743.1132
166Edwardsiella tarda EIB202BProt GE2853923,804,16640.3141
167Yersinia pseudotuberculosis YPIIIBProt GE2874314,689,44152.5141
168Yersinia pseudotuberculosis PB1/+BProt GE2874524,765,43152.5151
169Escherichia coli BL21(DE3)BProt GE2896514,557,04149.2132
170Candidatus Riesia pediculicola USDABProt GE290652582,12771.4N/A4N/A
171Escherichia coli DH1BProt GE3003114,630,70749.2142
172Escherichia coli O157:H7 str. TW14359BProt GE3004525,622,73749.5N/A41
173Photorhabdus asymbioticaBProt GE3057725,094,13857.9143
174Escherichia coli BL21(DE3)BProt GE3068114,570,93849.2142
175Salmonella enterica subsp. enterica serovar Enteritidis str. P125109BProt GE3068714,685,84847.8141
176Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91BProt GE3068914,658,69747.8141
177Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601BProt GE3094314,581,79747.8141
178Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)BProt GE312231641,89573.7N/A2N/A
179Buchnera aphidicola str. 5A (Acyrthosiphon pisum)BProt GE312251642,12273.7N/A2N/A
180Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)BProt GE3125922,169,36359.5N/A31
181Pectobacterium carotovorum subsp. carotovorum PC1BProt GE3128914,862,91348.1148
182Pectobacterium wasabiae WPP163BProt GE3129315,063,89249.5143
183Dickeya zeae Ech1591BProt GE3129514,813,85445.5142
184Escherichia coli O127:H6 str. E2348/69BProt GE3257135,069,67849.5131
185Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SBProt GE3306724,964,09747.8141
186Dickeya dadantii Ech703BProt GE3306914,679,45045.0143
187Escherichia fergusonii ATCC 35469BProt GE3336924,643,86150.1141
188Escherichia coli IAI1BProt GE3337314,700,56049.2131
189Escherichia coli S88BProt GE3337525,166,12149.4142
190Escherichia coli ED1aBProt GE3340915,209,54849.3142
191Escherichia coli IAI39BProt GE3341115,132,06849.4142
192Escherichia coli 55989BProt GE3341315,154,86249.3142
193Escherichia coli UMN026BProt GE3341535,358,20049.3152
194Shigella flexneri 2002017BProt GE3363964,894,49249.4131
195Dickeya dadantii Ech586BProt GE3366714,818,39446.4143
196Escherichia coli BW2952BProt GE3377514,578,15949.2142
197Citrobacter rodentium ICC168BProt GE3468545,444,28345.5152
198Erwinia pyrifoliae Ep1/96BProt GE3477954,072,84646.6153
199Edwardsiella ictaluri 93-146BProt GE3485313,812,31542.6141
200Yersinia pestis Z176003BProt GE3654744,725,78852.3151
201Klebsiella variicola At-22BProt GE3770115,458,50542.4131
202Erwinia pyrifoliae DSM 12163BProt GE3787754,072,82746.6143
203Cronobacter turicensisBProt GE3996544,599,15542.7142
204Escherichia coli 042BProt GE4064725,355,32349.5152
205Escherichia coli O55:H7 str. CB9615BProt GE4272925,452,35349.5141
206Pantoea ananatis LMG 20103BProt GE4308514,690,29846.3145
207Escherichia coli IHE3034BProt GE4369315,108,38349.3131
208Erwinia amylovora ATCC 49946BProt GE4375733,905,60446.4153
209Enterobacter cloacae subsp. cloacae ATCC 13047BProt GE4579335,598,79645.4153
210Erwinia amylovora CFBP1430BProt GE4680523,833,83246.4153
211Dichelobacter nodosus VCS1703ABProt GC5011,389,35055.612N/A
212Baumannia cicadellinicola str. Hc (Homalodisca coagulata)BProt GC125131686,19466.8N/A2N/A
213Nitrosococcus oceani ATCC 19707BProt GC1399323,522,11149.7162
214Alkalilimnicola ehrlichii MLHE-1BProt GC1576313,275,94432.5142
215Halorhodospira halophila SL1BProt GC1576712,678,45232.0142
216Candidatus Carsonella ruddii PVBProt GC179771159,66283.4N/AN/AN/A
217Thioalkalivibrio sp. HL-EbGR7BProt GC2917713,464,55434.9146
218Thioalkalivibrio sp. K90mixBProt GC3075922,985,05634.5143
219Halothiobacillus neapolitanus c2BProt GC3104912,582,88645.3143
220Allochromatium vinosum DSM 180BProt GC3254733,669,07435.8141
221Nitrosococcus halophilus Nc4BProt GC3658924,145,26048.4162
222Nitrosococcus watsoni C-113BProt GC4033133,373,28649.9161
223Acidithiobacillus ferrooxidans ATCC 23270BProt GA5312,982,39741.2151
224Colwellia psychrerythraea 34HBProt GA27515,373,18062.01412
225Saccharophagus degradans 2-40BProt GA31615,057,53154.21414
226Shewanella oneidensis MR-1BProt GA33525,131,41654.1145
227Idiomarina loihiensis L2TRBProt GA1079012,839,31853.0146
228Marinobacter aquaeolei VT8BProt GA1323934,779,76243.1154
229Alteromonas macleodii 'Deep ecotype'BProt GA1337414,412,28255.1147
230Shewanella amazonensis SB2BBProt GA1338514,306,14246.4155
231Shewanella baltica OS155BProt GA1338655,342,89653.8155
232Shewanella baltica OS195BProt GA1338945,547,54453.8146
233Shewanella denitrificans OS217BProt GA1339014,545,90654.9155
234Shewanella frigidimarina NCIMB 400BProt GA1339114,845,25758.4147
235Shewanella putrefaciens CN-32BProt GA1339314,659,22055.5155
236Pseudoalteromonas atlantica T6cBProt GA1345415,187,00555.4149
237Shewanella sp. W3-18-1BProt GA1390214,708,38055.4155
238Shewanella sp. MR-7BProt GA1390324,799,10952.1145
239Shewanella sp. MR-4BProt GA1390414,706,28752.1145
240Shewanella sp. ANA-3BProt GA1390525,251,14652.1145
241Shewanella loihica PV-4BProt GA1390614,602,59446.3145
242Pseudoalteromonas haloplanktis TAC125BProt GA1571323,850,27259.9146
243Psychromonas ingrahamii 37BProt GA1618714,559,59859.9133
244Aeromonas hydrophila subsp. hydrophila ATCC 7966BProt GA1669714,744,44838.4143
245Aeromonas salmonicida subsp. salmonicida A449BProt GA1672365,040,53641.8154
246Shewanella woodyi ATCC 51908BProt GA1745515,935,40356.314N/A
247Shewanella baltica OS185BProt GA1764325,312,91053.7146
248Shewanella piezotolerans WP3BProt GA1767515,396,47656.7158
249Shewanella baltica OS223BProt GA1798545,358,88453.7146
250Shewanella sediminis HAW-EB3BProt GA1878915,517,67453.9156
251Shewanella halifaxensis HAW-EB4BProt GA2024115,226,91755.4156
252Teredinibacter turnerae T7901BProt GA3083915,193,16449.1N/AN/AN/A
253Tolumonas auensis DSM 9187BProt GA3387313,471,29251.0133
254Sideroxydans lithotrophicus ES-1BProt BG3316113,003,65642.5136
255Escherichia coli B str. REL606182811N/AN/AN/AN/AN/A
256Xenorhabdus bovienii SS-2004133991N/AN/AN/AN/AN/A
257Escherichia coli O26:H11 str. 11368325095158,29150.6N/AN/AN/A
258Escherichia coli O103:H2 str. 1200932511275,54650.9N/AN/AN/A
259Escherichia coli O111:H- str. 11128325136395,00452.0N/AN/AN/A
260Vibrio cholerae O395328532N/AN/AN/AN/AN/A
261Shewanella violacea DSS12347391N/AN/AN/AN/AN/A
262Yersinia pestis D106004365074172,20252.3N/AN/AN/A
263Yersinia pestis D182038365454175,31952.2N/AN/AN/A
264Salmonella enterica subsp. enterica serovar Typhimurium406251N/AN/AN/AN/AN/A

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