Genome Atlas - 3.0 (beta)

35 projects found

Available Tables

Row	Organism	Tax Group	NCBI Project ID	Replicons	Total Size (bp)	% AT	HisKA Count	HisKA 1 Count	HisKA 2 Count	HisKA 3 Count	HWE HK Count	RRReceiver Count

1	Sorangium cellulosum 'So ce 56'	BProt DM	28111	1	13,033,779	28.6	0	N/A	N/A	N/A	N/A	0
2	Lawsonia intracellularis PHE/MN1-00	BProt DD	183	4	1,719,014	66.9	3	3	0	0	0	8
3	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	BProt DD	29493	1	2,873,437	41.9	14	14	0	0	0	25
4	Syntrophus aciditrophicus SB	BProt DS	16258	1	3,179,300	48.5	20	18	0	2	0	42
5	Desulfotalea psychrophila LSv54	BProt DD	12751	3	3,659,634	53.4	24	23	0	1	0	42
6	Desulfohalobium retbaense DSM 5692	BProt DD	29199	2	2,909,567	42.7	24	24	0	0	0	37
7	Pelobacter carbinolicus DSM 2380	BProt DD	13337	1	3,665,893	44.9	26	24	2	0	0	45
8	Desulfococcus oleovorans Hxd3	BProt DD	18007	1	3,944,167	43.8	33	32	0	1	0	75
9	Bdellovibrio bacteriovorus HD100	BProt DB	9637	1	3,782,950	49.3	38	38	0	0	0	52
10	Desulfovibrio desulfuricans subsp. desulfuricans str. G20	BProt DD	329	1	3,730,232	42.2	39	38	0	1	0	72
11	Desulfovibrio vulgaris str. Hildenborough	BProt DD	51	2	3,773,159	36.7	45	43	1	1	0	81
12	Desulfovibrio vulgaris DP4	BProt DD	17227	2	3,661,391	36.8	48	46	1	1	0	83
13	Pelobacter propionicus DSM 2379	BProt DD	13384	3	4,241,119	41.5	51	46	3	2	0	83
14	Desulfurivibrio alkaliphilus AHT2	BProt DD	33629	1	3,097,763	39.7	52	51	0	1	0	87
15	Syntrophobacter fumaroxidans MPOB	BProt DS	13013	1	4,990,251	40.0	61	53	2	6	0	82
16	Desulfovibrio vulgaris str. 'Miyazaki F'	BProt DD	27731	1	4,040,304	32.9	62	60	1	1	0	94
17	Desulfomicrobium baculatum DSM 4028	BProt DD	29527	1	3,942,657	41.4	65	63	0	2	0	108
18	Geobacter metallireducens GS-15	BProt DD	177	2	4,011,182	40.5	66	65	0	1	0	89
19	Desulfovibrio salexigens DSM 2638	BProt DD	29541	1	4,289,847	52.9	66	64	1	1	0	107
20	Geobacter sp. FRC-32	BProt DD	16263	1	4,304,501	46.5	67	67	0	0	0	106
21	Anaeromyxobacter dehalogenans 2CP-C	BProt DM	12634	1	5,013,479	25.1	73	71	0	2	0	107
22	Geobacter uraniireducens Rf4	BProt DD	15768	1	5,136,364	45.8	73	68	2	3	0	114
23	Desulfobacterium autotrophicum HRM2	BProt DD	20931	2	5,657,782	51.2	73	71	0	2	0	115
24	Geobacter lovleyi SZ	BProt DD	17423	2	3,994,874	45.3	74	71	0	3	0	127
25	Anaeromyxobacter dehalogenans 2CP-1	BProt DM	20095	1	5,029,329	25.3	74	72	0	2	0	108
26	Anaeromyxobacter sp. K	BProt DM	19743	1	5,061,632	25.2	75	73	0	2	0	110
27	Geobacter sulfurreducens PCA	BProt DD	192	1	3,814,139	39.1	78	75	0	3	0	105
28	Geobacter sulfurreducens KN400	BProt DD	39745	1	3,714,272	39.0	80	76	0	4	0	105
29	Haliangium ochraceum DSM 14365	BProt DM	28711	1	9,446,314	30.5	83	82	0	1	0	111
30	Anaeromyxobacter sp. Fw109-5	BProt DM	17729	1	5,277,990	26.5	87	85	0	2	0	122
31	Geobacter bemidjiensis Bem	BProt DD	17707	1	4,615,150	39.7	96	93	0	3	0	149
32	Geobacter sp. M21	BProt DD	20729	1	4,745,806	39.5	97	93	0	4	0	155
33	Desulfatibacillum alkenivorans AK-01	BProt DD	19449	1	6,517,073	45.5	109	107	0	2	0	166
34	Myxococcus xanthus DK 1622	BProt DM	1421	1	9,139,763	31.1	115	113	0	2	0	160
35	Desulfovibrio magneticus RS-1	BProt DD	32105	3	5,315,620	37.3	120	112	4	4	0	189

Acknowledgements:

This research is funded by:

A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing DCSC

Developed by:

Original concept: Peter Hallin et al.
Redesign, Current Maintainer: Stefano Borini