Acidobacteria
Actinobacteria
Alphaproteobacteria
Aquificae
Bacteroidetes/Chlorobi
Betaproteobacteria
Chlamydiae/Verrucomicrobia
Chloroflexi
Cyanobacteria
Deinococcus-Thermus
Deltaproteobacteria
Epsilonproteobacteria
Firmicutes
Fusobacteria
Gammaproteobacteria
Other Bacteria
Planctomycetes
Spirochaetes
Thermotogae
Classification of phyla is from
NCBI page
Search:
19
projects found
Available Tables
Row
Organism
Tax Group
NCBI Project ID
Replicons
Total Size (bp)
% AT
Number of
genes
Coding density
Bp/gene
Estimated
# proteins
True proteins
ratio
1
Borrelia afzelii PKo
BSpiro SS
17057
12
1,232,503
72.3
1,263
0.9
997
962
N/A
2
Borrelia burgdorferi ZS7
BSpiro SS
19839
15
1,345,494
71.7
1,239
0.8
1,113
N/A
N/A
3
Borrelia duttonii Ly
BSpiro SS
18231
17
1,574,881
72.0
1,305
0.8
1,263
N/A
N/A
4
Borrelia garinii PBi
BSpiro SS
12554
3
986,914
71.9
932
0.9
1,067
834
N/A
5
Borrelia hermsii DAH
BSpiro SS
29637
1
922,307
70.2
819
0.9
1,126
N/A
N/A
6
Borrelia recurrentis A1
BSpiro SS
18233
8
1,242,163
72.5
990
0.8
1,300
N/A
N/A
7
Borrelia turicatae 91E135
BSpiro SS
13597
1
917,330
70.9
818
0.9
1,121
N/A
N/A
8
Brachyspira hyodysenteriae WA1
BSpiro SB
31263
2
3,036,634
73.0
2,644
0.9
1,149
N/A
N/A
9
Brachyspira murdochii DSM 12563
BSpiro SB
29543
1
3,241,804
72.3
2,809
0.9
1,154
N/A
N/A
10
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'
BSpiro SL
16153
3
3,956,089
61.1
3,600
0.9
1,100
N/A
N/A
11
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'
BSpiro SL
20133
3
3,951,448
61.1
3,726
0.9
1,061
N/A
N/A
12
Leptospira borgpetersenii serovar Hardjo-bovis JB197
BSpiro SL
16148
2
3,876,235
59.8
2,880
0.7
1,346
2,509
N/A
13
Leptospira borgpetersenii serovar Hardjo-bovis L550
BSpiro SL
16146
2
3,931,782
59.8
2,945
0.7
1,335
2,583
N/A
14
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
BSpiro SL
10687
2
4,627,366
65.0
3,658
0.7
1,265
2,885
N/A
15
Leptospira interrogans serovar Lai str. 56601
BSpiro SL
293
2
4,691,184
65.0
4,725
0.8
993
2,997
N/A
16
Treponema denticola ATCC 35405
BSpiro SS
4
1
2,843,201
62.1
2,767
0.9
1,028
2,196
N/A
17
Treponema pallidum subsp. pallidum SS14
BSpiro SS
20067
1
1,139,457
47.2
1,028
0.9
1,108
N/A
N/A
18
Treponema pallidum subsp. pallidum str. Chicago
39981
1
N/A
N/A
N/A
N/A
N/A
N/A
N/A
19
Treponema pallidum subsp. pallidum str. Nichols
BSpiro SS
5
1
1,138,011
47.2
1,031
0.9
1,104
1,035
N/A
Acknowledgements:
This research is funded by:
A grant from the Danish Research Foundation.
A grant from the Danish Center for Scientific Computing
DCSC
.
Developed by:
Original concept:
Peter Hallin
et al.
Redesign, Current Maintainer:
Stefano Borini
.
