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An Environmental Signature for 323 Microbial Genomes based on Codon Adaptation Indices

Please see paper for details:
Hanni Willenbrock, Carsten Friis, Agnieszka S. Juncker, David W. Ussery
An Environmental Signature for 323 Microbial Genomes based on Codon Adaptation Indices



Supplement Data

Overview of genomes considered and link to the tCAI and dCAI values: [TABLE]

Relative adaptiveness of each codon (wij) (tab separated files): tCAI dCAI

Supplementary Figure 1: [PS] [PDF]
Cluster analysis of 323 microbial genomes based on difference in relative adaptiveness of each codon (wij for tCAI minus wij for dCAI).






For questions, please e-mail:
Hanni Willenbrock or David W. Ussery.



Last updated: July 28th, 2006 by Hanni Willenbrock