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LipoP 1.0 ServerPrediction of lipoproteins and signal peptides in Gram negative bacteriaThe LipoP 1.0 server produces predictions of lipoproteins and discriminates between lipoprotein signal peptides, other signal peptides and n-terminal membrane helices in Gram-negative bacteria. Note: Although LipoP 1.0 has been trained on sequences from Gram-negative bacteria only, the following paper reports that it has a good performance on sequences from Gram-positive bacteria also: Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria
Restrictions:
Confidentiality:
CITATIONSFor publication of results, please cite:
Prediction of lipoprotein signal peptides in Gram-negative bacteria. View the abstract. PORTABLE VERSIONWould you prefer to run LipoP at your own site? LipoP 1.0 is available
as a stand-alone software package, with the same functionality as the service
above.
For now only a Linux version exists.
There is a
download page
for academic users; other users are requested to contact CBS Software Package
Manager at software@cbs.dtu.dk.
GETTING HELP
Scientific problems:
Technical problems:
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