LipoP 1.0 Server
Prediction of lipoproteins and signal peptides in Gram negative bacteria
The LipoP 1.0 server produces predictions of lipoproteins and discriminates between lipoprotein signal peptides, other signal peptides and n-terminal membrane helices in Gram-negative bacteria.
Note: Although LipoP 1.0 has been trained on sequences from Gram-negative bacteria only, the following paper reports that it has a good performance on sequences from Gram-positive bacteria also:
Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria
For publication of results, please cite:
Prediction of lipoprotein signal peptides in Gram-negative bacteria.
View the abstract.
Would you prefer to run LipoP at your own site? LipoP 1.0 is available
as a stand-alone software package, with the same functionality as the service
For now only a Linux version exists.
There is a
for academic users; other users are requested to contact CBS Software Package
Manager at email@example.com.
Scientific problems: Technical problems: