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MatrixPlot 1.2: Fasta format for nucleotides

Introduction Data format User matrix Mutual Nucl Mutual Prot Dist matrix

The letters for nucleotide sequences are A, C, G , U, T and - to indicate gaps. The letters are always to be specified to the Inform program.

The msf format is used as output from a number of multi sequence alignment programs. However, as 'msf' formats can vary for different programs, we feel that it is necessary to state what this program expects from the format.

First any number of lines are skipped, until a line is encountered, where the fields (seperated by whitespaces) match the following:

(
   first is "MSF:",
   third is "Type:",
OR
   second is "MSF:",
   fourth is "Type:",
) AND 
   last  is "..",
   last-2 is "Check:"

Then the sequence length is read from field 2 or 3, depending on whether field 1 or 2 contains the "MSF:" string.

The number of lines are skipped until "//" is encountered in a seperate line. Every time "first field" is "Name:" number of sequences are counted one up. While input remains: Skip 1 line.

An optional number of lines starting with _atleast_ 10
spaces "          " are skipped
The next lines (as many as there are registered sequences) have their sequences concatenated to the result. First field is assumed to be a name, the rest is assumed to be sequences.



 x1.msf  MSF: 429  Type: N  January 01, 1776  12:00  Check: 7189 ..

 Name: Seq0             Len:   429  Check:  1001  Weight:  1.00
 Name: Seq1             Len:   429  Check:   757  Weight:  1.00
 Name: Seq2             Len:   429  Check:  1345  Weight:  1.00
 Name: Seq3             Len:   429  Check:  5767  Weight:  1.00
 Name: Seq4             Len:   429  Check:  3049  Weight:  1.00
 Name: Seq5             Len:   429  Check:  2812  Weight:  1.00
 Name: Seq6             Len:   429  Check:  2812  Weight:  1.00
 Name: Seq7             Len:   429  Check:   155  Weight:  1.00
 Name: Seq8             Len:   429  Check:  9850  Weight:  1.00
 Name: Seq9             Len:   429  Check:  3923  Weight:  1.00
 Name: Seq10            Len:   429  Check:  4635  Weight:  1.00
 Name: Seq11            Len:   429  Check:  4298  Weight:  1.00
 Name: Seq12            Len:   429  Check:  5337  Weight:  1.00
 Name: Seq13            Len:   429  Check:  5223  Weight:  1.00
 Name: Seq14            Len:   429  Check:  4816  Weight:  1.00
 Name: Seq15            Len:   429  Check:  4298  Weight:  1.00
 Name: Seq16            Len:   429  Check:  3951  Weight:  1.00
 Name: Seq17            Len:   429  Check:  2034  Weight:  1.00
 Name: Seq18            Len:   429  Check:  7077  Weight:  1.00
 Name: Seq19            Len:   429  Check:  5186  Weight:  1.00
 Name: Seq20            Len:   429  Check:  6265  Weight:  1.00
 Name: Seq21            Len:   429  Check:  3864  Weight:  1.00
 Name: Seq22            Len:   429  Check:  4367  Weight:  1.00
 Name: Seq23            Len:   429  Check:  4367  Weight:  1.00

//

  Seq0  ATGGTGCTGT CTGCCGCCGA CAAGTCCAAT GTCAAGGCCG CCTGGGGCAA
  Seq1  ATGGTGCTGT CTGCCGCCGA CAAGTCCAAT GTCAAGGCCG CCTGGGACAA
  Seq2  ATGGTGCTGT CTGCCGCCGA CAAGTCCAAT GTCAAGGCCG CCTGGGGCAA
  Seq3  ATGGTGCTGT CTCCTGCCGA CAAGAGCAAC GTCAAGGCCG CCTGGGGTAA
  Seq4  ATGGTGCTGT CTCCTGCCGA CAAGACCAAC GTCAAGGCCG CCTGGGGTAA
  Seq5  ATGGTGCTGT CTCCTGCCGA CAAGACCAAC GTCAAGGCCG CCTGGGGTAA
  Seq6  ATGGTGCTGT CTCCTGCCGA CAAGACCAAC GTCAAGGCCG CCTGGGGTAA
  Seq7  ATGGTGCTCT CTGGGGAAGA CAAAAGCAAC ATCAAGGCTG CCTGGGGGAA
  Seq8  ATGGTGCTCT CTGAAGAAGA CAAAAACAAC ATCAAGAAAG CCTGGGTGAA
  Seq9  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAAAGCCC TATGGGCTAA
 Seq10  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAAAGCCC TATGGGCTAA
 Seq11  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAAAGCCC TATGGGCTAA
 Seq12  ATGAGTCTCT CTGATAAGGA CAAGTCTGCT GTGAAGGGCT TATGGGCTAA
 Seq13  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAACACGC TATGGGCTAA
 Seq14  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAAAGCCC TATGGGCTAA
 Seq15  ATGAGTCTCT CTGATAAGGA CAAGGCTGCT GTGAAAGCCC TATGGGCTAA
 Seq16  ATGGCACTGA CCCAAGCTGA GAAGGCTGCC GTGACCACCA TCTGGGCAAA
 Seq17  ATGGTGCTGT CCGCTGCTGA CAAGAACAAC GTCAAGGGCA TCTTCACCAA
 Seq18  ATG---CTGA CTGCCGAGGA CAAGAAGCTC ATCCAGCAGG CCTGGGAGAA
 Seq19  ATGACTCTGA CTGATAGTGA GAAGGCTGCA GTCGTTGCTC TGTGGAGCAA
 Seq20  ATGCATCTTA CAGCTGATGA CAAGAAACAC ATCAAGGCCA TTTGGCCTTC
 Seq21  ATGAGTCTGA CAGCAAAGGA CAAATCTGTG GTCAAGGCCT TCTGGGGCAA
 Seq22  ATGAGTCTGA CAGCAAGGGA CAAATCTGTG GTCAATGCCT TCTGGGGCAA
 Seq23  ATGAGTCTGA CAGCAAGGGA CAAATCTGTG GTCAATGCCT TCTGGGGCAA

  Seq0  GGTTGGCGGC AACGCTGGAG CTTATGGCGC AGAGGCTCTG GAGAGGATGT
  Seq1  GGTTGGCGGC AACGCTGGAG CTTATGGCGC AGAGGCTCTG GAGAGGATGT
  Seq2  GGTTGGCGGC AACGCTGGAG CTTATGGCGC AGAGGCTCTG GAGAGGATGT
  Seq3  GGTCGGCGGG CACGCTGGCG AGTATGGTGC GGAGGCCCTG GAGAGGATGT
  Seq4  GGTCGGCGCG CACGCTGGCG AGTATGGTGC GGAGGCCCTG GAGAGGATGT
  Seq5  GGTCGGCGCG CACGCTGGCG AGTATGGTGC GGAGGCCCTG GAGAGGATGT
  Seq6  GGTCGGCGCG CACGCTGGCG AGTATGGTGC GGAGGCCCTG GAGAGGATGT
  Seq7  GATTGGTGGC CATGGTGCTG AATATGGAGC TGAAGCCCTG GAAAGGATGT
  Seq8  GATTGGTAAC CATGCTGCTG AAATTGGCGC AGAGACCATA GGGAGGTTGT
  Seq9  GATCAGCTCC AAAGCCGATG ATATCGGCGC TGAAGCTCTC GGCAGAATGC
 Seq10  GATCAGCCCC AAAGCCGATG ATATCGGCGC TGAAGCCCTC GGCAGAATGC
 Seq11  GATCAGCCCC AAAGCCGATG ATATCGGCGC TGAAGCTCTC GGCAGAATGC
 Seq12  GATTAGCCCC AAGGCCGATG AAATCGGCGC TGAAGCCTTC GGCAGAATGC
 Seq13  GATCAGCCCT AAACGCGATG ATATCGGCGC TGAAGCCCTC GGCAGAATGC
 Seq14  GATCAGCCCT AAAGCCGATG ATATCGGCGC TGAAGCCCTC GGCAGAATGC
 Seq15  GATCAGCCCC AAAGCCGATG ATATCGGCGC TGAAGCTCTC GGCAGAATGC
 Seq16  GGTGGCTACC CAGATTGAGT CCATTGGGCT GGAATCACTG GAGAGGCTTT
 Seq17  AATCGCCGGC CATGCTGAGG AGTATGGCGC CGAGACCCTG GAAAGGATGT
 Seq18  GGCCGCTTCC CACCAGGAGG AGTTTGGAGC TGAGGCTCTG ACTAGGATGT
 Seq19  AATTGCACCC CAAGCTAGTG CAATTGGAGC TGAGGCTTTG GAGAGGCTTT
 Seq20  TGTAGCTGCT CATGGTGACA AATATGGCGG AGAAGCTTTG CACAGGATGT
 Seq21  GATTAGTGGA AAGGCAGATG TCGTCGGCGC TGAGGCTTTG GGAAGGTTGC
 Seq22  GATTAAAGGA AAGGCAGATG TCGTCGGCGC TGAGGCTTTG GGAAGGATGC
 Seq23  GATTAAAGGA AAGGCAGATG TCGTCGGCGC TGAGGCTTTG GGAAGGATGC

  Seq0  TCCTGAGCTT CCCCACCACC AAGACCTACT TCCCCCACTT C---GACCTG
  Seq1  TCCTGAGCTT CCCCACCACC AAGACCTACT TCCCCCACTT C---GACCTG
  Seq2  TCCTGAGCTT CCCCACCACC AAGACCTACT TCCCCCACTT C---GACCTG
  Seq3  TCCTGTCCTT CCCCACCACC AAGACCTACT TCCCCCACTT C---GACCTG
  Seq4  TCCTGTCCTT CCCCACCACC AAGACCTACT TCCCGCACTT C---GACCTG
  Seq5  TCCTGTCCTT CCCCACCACC AAGACCTACT TCCCGCACTT C---GACCTG
  Seq6  TCCTGTCCTT CCCCACCACC AAGACCTACT TCCCGCACTT C---GACCTG
  Seq7  TTGCTAGCTT CCCCACCACC AAGACCTACT TTCCTCACTT T---GATGTA
  Seq8  TCATTGTCTT CCCCTCCTCC AAGACCTACT TCCCTCACTT T---AATACA
  Seq9  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGCTGACCTG
 Seq10  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGCTGACCTG
 Seq11  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGATGACCTG
 Seq12  TGACCGTCTA CCCTCAGACC AAGACCTACT TCTCTCACTG GGCCGACCTG
 Seq13  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGCTGACCTG
 Seq14  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGCTGACCTG
 Seq15  TGACCGTCTA CCCTCAGACC AAGACCTACT TCGCTCACTG GGATGACCTG
 Seq16  TTGCCAGCTA TCCTCAGACG AAAACCTACT TCCCTCACTT T---GATGTC
 Seq17  TCACCACCTA CCCCCCAACC AAGACCTACT TCCCCCACTT C---GATCTG
 Seq18  TCACCACCTA TCCCCAGACC AAGACCTACT TCCCCCACTT C---GACCTT
 Seq19  TCCTGTCCTA TCCCCAGACC AAGACTTACT TCAGCCACTT T---GATGTG
 Seq20  TCATGTGTGC TCCCAAGACC AAAACCTACT TTCCTGATTT T---GACTTC
 Seq21  TGACCGCCTA CCCCCAGACT AAGACCTACT TCTCCCACTG GGCTGACCTG
 Seq22  TGACTGCTTA CCCCCAGACT AAGACCTACT TCTCCCACTG GGCTGACCTG
 Seq23  TGACTGCTTA CCCCCAGACT AAGACCTACT TCTCCCACTG GGCTGACCTG

  Seq0  AGCCACGGCT CGGCCCAGGT CAAGGGCCAC GGCGAGAAGG TGGCCGCCGC
  Seq1  AGCCACGGCT CGGCCCAGGT CAAGGGCCAC GGCGAGAAGG TGGCCGCCGC
  Seq2  AGCCACGGCT CGGCCCAGGT CAAGGGCCAC GGCGAGAAGG TGGCCGCCGC
  Seq3  AGCCACGGCT CTGCCCAGGT TAAGGGCCAC GGCAAGAAGG TGGCCGACGC
  Seq4  AGCCACGGCT CTGCCCAAGT TAAGGGCCAC GGCAAGAAGG TGGCCGACGC
  Seq5  AGCCACGGCT CTGCCCAGGT TAAGGGCCAC GGCAAGAAGG TGGCCGACGC
  Seq6  AGCCACGGCT CTGCCCAGGT TAAGGGCCAC GGCAAGAAGG TGGCCGACGC
  Seq7  AGCCACGGCT CTGCCCAGGT CAAGGGTCAC GGCAAGAAGG TCGCCGATGC
  Seq8  AGTGAGGGCT CCGACCAGGT CAAGGCTCAC GGCAAGAAGG TTGCTGATGC
  Seq9  AGCCTGGGTC CAGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGCTGC
 Seq10  AGCCCTGGGT CCGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGGTGC
 Seq11  AGCCCTGGGT CCGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGGTGC
 Seq12  AGCCCTGGGG GTGCTCAAGT GAAGAAGCAT GGCAAGGTTA TCATGGCTGC
 Seq13  AGCCCTGGGT CCGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGGTGC
 Seq14  AGCCCTGGGT CCGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGGTGC
 Seq15  AGCCCTGGGT CCGGTCCTGT GAAGAAGCAT GGCAAGGTTA TCATGGGTGC
 Seq16  AGCCAAGGCT CAGTTCAGCT TCGTGGTCAC GGCTCCAAGG TCCTGAATGC
 Seq17  TCACACGGCT CCGCTCAGAT CAAGGGGCAC GGCAAGAAGG TAGTGGCTGC
 Seq18  TCGCCTGGCT CTGACCAGGT CCGTGGCCAT GGCAAGAAGG TGTTGGGTGC
 Seq19  TCTCATGGCT CTGCTGATCT TCAAAACCAC GGAGGCAAGG TTGTGAATGC
 Seq20  AGCGAACATT CAAAACACAT CTTGGCTCAT GGCAAGAAAG TTTCGGATGC
 Seq21  AGCCCCGGCT CTGCCCCAGT CAAGAAACAT GGAAGCACCA TCATGGGTGC
 Seq22  AGCCCCGGCT CTGCCCCAGT CAAGAAGCAT GGAGCCGTCA TCATGGGTGC
 Seq23  AGCCCCGGCT CTGCCCCAGT CAAGAAGCAT GGAGCCGTCA TCATGGGTGC

  Seq0  GCTGACCAAA GCGGTGGGCC ACCTGGACGA CCTGCCCGGT ACCCTGTCTG
  Seq1  GCTGACCAAA GCGGTGGGCC ACCTGGACGA CCTGCCCGGT ACCCTGTCTG
  Seq2  GCTGACCAAA GCGGTGGGCC ACCTGGACGA CCTGCCCGGT ACCCTGTCTG
  Seq3  GCTGACCCTC GCCGTGGGGC ACGTGGACGA CATGCCCCAC GCGCTGTCCG
  Seq4  GCTGACCAAC GCCGTGGCGC ACGTGGACGA CATGCCCAAC GCGCTGTCCG
  Seq5  GCTGACCAAC GCCGTGGCGC ACGTGGACGA CATGCCCAAC GCGCTGTCCG
  Seq6  GCTGACCAAC GCCGTGGCGC ACGTGGACGA CATGCCCAAC GCGCTGTCCG
  Seq7  GCTGGCCAGT GCTGCAGGCC ACCTCGATGA CCTGCCCGGT GCCTTGTCTG
  Seq8  CCTGACCAAT GCTGCAAGCC ACCTCGATGA CCTGCCTGGT GCCCTGTCCA
  Seq9  AGTCGGCGAT GGCCTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCCT
 Seq10  AGTCGGCGAT GCCGTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCTG
 Seq11  AGTGGCCGAT GCCGTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCCT
 Seq12  AGTCGGCGAT GCTGTCTCAA AAATAGACGA CCTTGTGGGA GGTCTGATGG
 Seq13  AGTCGGCGAT GCCGTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCTG
 Seq14  AGTCGGCGAT GCCGTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCTG
 Seq15  AGTGGCCGAT GCCGTTTCAA AAATAGACGA CCTTGTGGGA GGTCTGGCCT
 Seq16  CATTGGGGAA GCTGTGAAGA ACATCGATGA CATTAGAGGT GCTTTGGCCA
 Seq17  CTTGATCGAG GCTGCCAACC ACATTGATGA CATCGCCGGC ACCCTCTCCA
 Seq18  CCTGGGCAAC GCCGTGAAGA ACGTGGACAA CCTCAGCCAG GCCATGGCTG
 Seq19  TCTTGGAGAA GCTGCCAAAC ACCTGAATGA CCTGGATGCT GCTCTGTCCA
 Seq20  TCTGAATGAG GCTTGCAACC ATCTGGACAA CATTGCCGGA TGCCTGTCCA
 Seq21  AATTGGTAAT GCTGTCGGAC TGATCGACGA CCTCGTCGGA GGACTGAGTG
 Seq22  AATTGGTAAT GCTGTCGGAC TGATGGACAA CCTCGTGGGT GGACTGAGTG
 Seq23  AATTGGTAAT GCTGTCGGAC TGATGGACAA CCTCGTGGGT GGACTGAGTG

  Seq0  ATCTGAGTGA CCTGCACGCC CACAAGCTGC GTGTGGACCC GGTCAACTTC
  Seq1  ATCTGAGTGA CCTGCACGCC CACAAGCTGC GTGTGGACCC GGTCAACTTC
  Seq2  ATCTGAGTGA CCTGCACGCC CACAAGCTGC GTGTGGACCC GGTCAACTTC
  Seq3  CGCTGAGCGA CCTGCACGCG CACAAGCTTC GGGTGGACCC GGTCAACTTC
  Seq4  CCCTGAGCGA CCTGCACGCG CACAAGCTTC GGGTGGACCC GGTCAACTTC
  Seq5  CCCTGAGCGA CCTGCACGCG CACAAGCTTC GGGTGGACCC GGTCAACTTC
  Seq6  CCCTGAGCGA CCTGCACGCG CACAAGCTTC GGGTGGACCC GGTCAACTTC
  Seq7  CTCTGAGCGA CCTGCATGCC CACAAGCTGC GTGTGGATCC CGTCAACTTC
  Seq8  CTCTGAGCGA CCTGCATGCC CACAAACTGC GTGTGGATCC TGTCAACTTC
  Seq9  CCCTGAGCGA ACTTCATGCT TCCAAGCTCC GTGTTGACCC GGCCAACTTC
 Seq10  CCCTGAGCGA ACTTCATGCT TTCAAGCTGC GTGTTGACCC GGCCAACTTC
 Seq11  CCCTGAGCGA ACTTCATGCT TCCAAGCTGC GTGTTGACCC GGCCAACTTC
 Seq12  CCCTGAGCGA ACTTCATGCT TTCAAGCTCC GTGTTGACCC GGCCAACTTC
 Seq13  CCCTGAGCGA ACTTCATGCT TTCAAGCTGC GTGTTGACCC GGGCAACTTC
 Seq14  CCCTGAGCGA ACTTCATGCT TTCAAGCTGC GTGTTGACCC GGCCAACTTC
 Seq15  CCCTGAGCGA ACTTCATGCT TCCAAGCTGC GTGTTGACCC GGCCAACTTC
 Seq16  AACTCAGCGA GCTGCATGCT TACATCCTCA GGGTGGACCC AGTGAACTTC
 Seq17  AGCTCAGCGA CCTCCATGCC CACAAGCTCC GCGTGGACCC TGTCAACTTC
 Seq18  AGCTGAGCAA CCTGCATGCC TACAACCTGC GTGTTGACCC CGTCAATTTC
 Seq19  CACTCAGTGA CCTGCATGCC TACAACCTGA GAGTGGATCC TGGAAACTTT
 Seq20  AGCTGAGTGA CCTCCATGCC TATGACCTGA GAGTGGATCC AGGCAACTTC
 Seq21  CTCTCAGCGA TTTGCACGCC TTCAAGCTCC GCGTTGACCC TGGAAACTTC
 Seq22  CTCTCAGCGA TCTGCACGCC TTCAAGCTGC GCGTTGACCC TGGAAACTTC
 Seq23  CTCTCAGCGA TCTGCACGCC TTCAAGCTGC GCGTTGACCC TGGAAACTTC

  Seq0  AAGCTTCTGA GCCACACCCT GCTGGTGACC CTGGCCTGCC ACCACCCCAA
  Seq1  AAGCTTCTGA GCCACACCCT GCTGGTGACC CTGGCCTGCC ACCTCCCCAA
  Seq2  AAGCTTCTGA GCCACACCCT GCTGGTGACC CTGGCCTGCC ACCTCCCCAA
  Seq3  AAGCTCCTGA GCCACTGCCT GCTGGTGACT CTGGCCGCTC ACCTCCCCGC
  Seq4  AAGCTCCTAA GCCACTGCCT GCTGGTGACC CTGGCCGCCC ACCTCCCCGC
  Seq5  AAGCTCCTAA GCCACTGCCT GCTGGTGACC CTGGCCGCCC ACCTCCCCGC
  Seq6  AAGCTCCTAA GCCACTGCCT GCTGGTGACC CTGGCCGCCC ACCTCCCCGC
  Seq7  AAGCTCCTGA GCCACTGCCT GCTGGTGACC TTGGCTAGCC ACCACCCTGC
  Seq8  AAGTTCCTGA GCCACTGCCT GCTGGTGACC TTGGCTAGCC ACCACCCTGG
  Seq9  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTTCCCTGG
 Seq10  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTACCCTGG
 Seq11  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTTCCCTGG
 Seq12  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTTCCCTGG
 Seq13  AAGATTCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTACCCTGG
 Seq14  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTTCCCTGG
 Seq15  AAGATCCTCG CACACAATGT CATCGTGGTC ATCGGCATGC TCTTCCCTGG
 Seq16  AAGCTGCTTT CCCACTGTAT CCTGTGCTCT GTGGCTGCCC GCTATCCCAG
 Seq17  AAACTCCTGG GCCAATGCTT CCTGGTGGTG GTGGCCATCC ACCACCCTGC
 Seq18  AAGCTGTTGT CGCAGTGCAT CCAGGTGGTG CTGGCTGTAC ACATGGGCAA
 Seq19  AAGTTGCTGT CTCACACCAT CCAGGTGACT CTGGCTGTCC ACTTCCAAAA
 Seq20  CCATTGCTGG CCCATCAAAT TCTGGTGGTT GTTGCTATCC ATTTCCCTAA
 Seq21  AAGGTTCTGT CCCACAACAT CCTTGTGACC CTGGCTATTC ACTTCCCTGC
 Seq22  AAGATTCTGT CCCACAACAT CCTTGTGACC CTGGCTATTC ACTTCCCTGC
 Seq23  AAGATTCTGT CCCACAACAT CCTTGTGACC CTGGCTATTC ACTTCCCTGC

  Seq0  TGATTTCACC CCCGCGGTCC ACGCCTCCCT GGACAAGTTC TTGGCCAACG
  Seq1  TGATTTCACC CCCGCGGTCC ACGCCTCCCT GGACAAGTTC TTGGCCAACG
  Seq2  TGATTTCACC CCCGCGGTCC ACGCCTCCCT GGACAAGTTC TTGGCCAACG
  Seq3  CGAGTTCACC CCTGCGGTGC ACGCCTCCCT GGACAAGTTC CTGGCTTCTG
  Seq4  CGAGTTCACC CCTGCGGTGC ACGCTTCCCT GGACAAGTTC CTGGCTTCTG
  Seq5  CGAGTTCACC CCTGCGGTGC ACGCCTCCCT GGACAAGTTC CTGGCTTCTG
  Seq6  CGAGTTCACC CCTGCGGTGC ACGCCTCCCT GGACAAGTTC CTGGCTTCTG
  Seq7  CGATTTCACC CCCGCGGTAC ATGCCTCTCT GGACAAATTC CTTGCCTCTG
  Seq8  GGATTTCACA CCCGCCATGC ACGCCTCTCT GGACAAATTC TTTGCCTCTG
  Seq9  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq10  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq11  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq12  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq13  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq14  AGACTTCTCC CCAGAGGTTC ACATGTCAGT TGACAACTTT TTCCAGAACT
 Seq15  AGACTTCCCC CCAGAGGTTC ACATGTCAGT TGACAAGTTT TTCCAGAACT
 Seq16  TGATTTCACC CCAGAAGTTC ATGCTGCGTG GGACAAGTTC CTGTCCAGCA
 Seq17  TGCCCTGACC CCGGAGGTCC ATGCTTCCCT GGACAAGTTC TTGTGCGCCG
 Seq18  AGACTACACC CCTGAAGTGC ATGCTGCCTT CGACAAGTTC CTGTCTGCCG
 Seq19  GGAATTTGAT GCTGCCACAC AGGCCGCTTG GGACAAATTC CTCTCTGAGG
 Seq20  GCAGTTTGAC CCTGCAACCC ATAAGGCCCT GGACAAGTTC CTGGTTTCCG
 Seq21  GGATTTCACT CCCGAAGTGC ACATTGCTGT GGATAAATTC CTTGCAGCCT
 Seq22  GGATTTCACT CCCGAAGTGC ACATTGCTGT GGATAAATTC CTTGCAGCCT
 Seq23  GGATTTCACT CCCGAAGTGC ACATTGCTGT GGATAAATTC CTTGCAGCCT

  Seq0  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq1  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq2  TGAGCACCGT GCTGACTTCC AAATACCGT
  Seq3  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq4  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq5  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq6  TGAGCACCGT GCTGACCTCC AAATACCGT
  Seq7  TGAGCACCGT GCTGACCTCC AAGTACCGT
  Seq8  TGAGCACTGT GTTGACTTCC AAGTACCGT
  Seq9  TGGCTCTGGC TCTCTCTGAG AAGTACCGC
 Seq10  TGGCTCTGGC TCTCTCTGAG AAGTACCGC
 Seq11  TGGCTCTGGC TCTCTCTGAG AAGTACCGC
 Seq12  TGGCCCTGGC TCTCGCTGAG AAGTACCGC
 Seq13  TGGCTCTGGC TCTCTCTGAG AGGTACCGC
 Seq14  TGGCTCTGGC TCTCTCTGAG AAGTACCGC
 Seq15  TGGCTCTGGC TCTCTCTGAG AAGTACCGC
 Seq16  TTTCCTCTGT TCTGACTGAG AAATACAGA
 Seq17  TGGGCACTGT GCTGACCGCC AAGTACCGT
 Seq18  TGTCTGCTGT GCTGGCTGAG AAGTACAGA
 Seq19  TTGCCACTGT CCTCACCTCC AAATACAGA
 Seq20  TATCTAATGT TCTGACATCC AAATATCGT
 Seq21  TGTCCGCTGC CCTGGCTGAC AAATACAGA
 Seq22  TGTCCGCTGC CCTGGCTGAC AAATACAGA
 Seq23  TGTCCGCTGC CCTGGCTGAC AAATACAGA




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