Article abstract

Prediction of neoepitopes from murine sequencing data

Anne-Mette Bjerregaard*, Thomas Kainamura Pedersen*, Andrea Marion Marquard, Sine R. Hadrup

We recently published the tool MuPeXI, the mutant peptide extractor and informer, enabling neoepitope prediction from tumor sequencing data. MuPeXI is originally designed for variant calls obtained from sequencing data of human origin but increasing interest to determine neo-epitopes in murine models have encouraged us to update and test MuPeXI for mouse compatibility.


Anne-Mette Bjerregaard,