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NetAcet 1.0 Server

NetAcet 1.0 server predicts substrates of N-acetyltransferase A (NatA). The method was trained on yeast data but, as mentioned in the article describing the method, it obtains similar performance values on mammalian substrates acetylated by NatA orthologs.

Background Instructions Output format Article abstract

SUBMISSION

Paste a single sequence or several sequences in FASTA format into the field below:

Submit a file in FASTA format directly from your local disk:

Show input sequences      Show individual network scores

Restrictions:
At most 2000 sequences and 200,000 amino acids per submission; each sequence not less than 40 and not more than 4,000 amino acids.

Confidentiality:
The sequences are kept confidential and will be deleted after processing.

CITATIONS

For publication of results, please cite:

NetAcet: Prediction of N-terminal acetylation sites.
Lars Kiemer, Jannick Dyrløv Bendtsen and Nikolaj Blom.
Accepted in Bioinformatics, 2004.

View the abstract.

PORTABLE VERSION

Would you prefer to run NetAcet at your own site? NetAcet 1.0 software package is in preparation. The available platforms will include MIPS (under IRIX, Silicon Graphics), SPARC (under Solaris, Sun), Alpha (under OSF1) and Pentium family (under Linux and CYGWIN). Send inquiries by e-mail to software@cbs.dtu.dk.

GETTING HELP

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This file was last modified Monday 22nd of August 2011 11:52:58 GMT