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Version history
Please click on the version number to activate the corresponding server.
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3.1
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The current server. New in this version:
- Improved quality of prediction through novel sequence encoding and network training strategy
Main publication:
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The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage.
Nielsen M, Lundegaard C, Lund O, and Kesmir C.
Immunogenetics, 57:33-41, 2005.
View the abstract.
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2.0
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New in this version:
- NetChop 2.0 C-term: Proteasome clevage predictor trained on C terminal of known CTL epitopes
- NetChop 2.0 20S: Proteasome clevage predictor trained on in vitro digest data produced by the constitutive proteasome
Main publication:
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Prediction of proteasome cleavage motifs by neural networks.
Kesmir C, Nussbaum AK, Schild H, Detours V, Brunak S
Protein Eng15(4):287-96, 2002
View the abstract.
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