NetGene2 Server

The NetGene2 server is a service producing neural network predictions of splice sites in human, C. elegans and A. thaliana DNA.

Instructions

Output format

Abstract

Performance report

SUBMISSION

Submission of a local file with a single sequence:

File in FASTA format

Human C. elegans A. thaliana

Submission by pasting a single sequence:

Sequence name

Human C. elegans A. thaliana

Sequence

NOTE: The submitted sequences are kept confidential and will be erased immediately after processing.

CITATIONS

PAPERS TO REFERENCE WHEN REPORTING RESULTS
S.M. Hebsgaard, P.G. Korning, N. Tolstrup, J. Engelbrecht, P. Rouze, S. Brunak: Splice site prediction in Arabidopsis thaliana DNA by combining local and global sequence information, Nucleic Acids Research, 1996, Vol. 24, No. 17, 3439-3452. Brunak, S., Engelbrecht, J., and Knudsen, S.: Prediction of Human mRNA Donor and Acceptor Sites from the DNA Sequence, Journal of Molecular Biology, 1991, 220, 49-65.

PORTABLE VERSION

Would you prefer to run NetGene2 at your own site? NetGene2 2.42 is available as a stand-alone software package, with the same functionality as the service above. There is a download page for academic users; other users are requested to contact CBS Software Package Manager at software@cbs.dtu.dk.

GETTING HELP