The NetGene2 server is a service producing neural network predictions of splice sites in human, C. elegans and A. thaliana DNA.
Submission of a local file with a single sequence:
Submission by pasting a single sequence:
NOTE: The submitted sequences are kept confidential and will be erased immediately after processing.
At most 1 sequence not less than 200 and not more than 100,000 nucleotides.
The sequence identifier can only contain alphanumeric characters.
The sequences are kept confidential and will be deleted after processing.
PAPERS TO REFERENCE WHEN REPORTING RESULTS
S.M. Hebsgaard, P.G. Korning, N. Tolstrup, J. Engelbrecht, P. Rouze, S. Brunak: Splice site prediction in Arabidopsis thaliana DNA by combining local and global sequence information, Nucleic Acids Research, 1996, Vol. 24, No. 17, 3439-3452. Brunak, S., Engelbrecht, J., and Knudsen, S.: Prediction of Human mRNA Donor and Acceptor Sites from the DNA Sequence, Journal of Molecular Biology, 1991, 220, 49-65.
Would you prefer to run NetGene2 at your own site? NetGene2 2.42 is available
as a stand-alone software package, with the same functionality as the service
for academic users; other users are requested to contact CBS Software Package
Manager at firstname.lastname@example.org.