NetMHCpan 1.1 Server
NetMHCpan server predicts binding of peptides to 478 and 791 different HLA A and B alleles using artificial neural networks (ANNs). This is a beta version of the server, and it is in the process of being updated with other features (prediction of user defined MHC molecules, ect)
Predictions can be made for 8-11 mer peptides. Note that all non 9mer predictions are made using approximations. Most HLA molecules have a strong preference for binding 9mers.
The prediction values are given in nM IC50 values.
The project is a collaboration between CBS and IMMI.
View the version history of this server. All the previous versions are available on line, for comparison and reference.
For publication of results, please cite:
Data resources used to develop this server was obtained from
Would you prefer to run NetMHC:locifer at your own site? The NetMHC:locifer package is
in preparation. It will soon be available for the most common UNIX
MIPS (under IRIX, Silicon Graphics),
SPARC (under Solaris, Sun),
Alpha (under OSF1) and
Pentium family (under Linux).
Send inquiries by e-mail to
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