CBS >> CBS Prediction Servers >> NetMHCpan >> Output format
Residue number. HLA Allele Peptide sequence Protein identifier Prediction score (called 1-log50K(aff) for ANN predictions) Affinity as IC50 value in nM (only for ANN predictions) Binding level
# NetMHCpan version 1.1 # Input is in FSA format # Threshold for Strong binding peptides 50.000 # Threshold for Weak binding peptides 500.000 # Peptide length 8 ----------------------------------------------------------------------------------- pos HLA peptide Identity 1-log50k(aff) Affinity(nM) Bind Level ----------------------------------------------------------------------------------- 0 HLA-A*0101 TMDKSELV 143B_BOVIN__P29 0.254 3210.85 1 HLA-A*0101 MDKSELVQ 143B_BOVIN__P29 0.017 41740.22 2 HLA-A*0101 DKSELVQK 143B_BOVIN__P29 0.018 41102.70 3 HLA-A*0101 KSELVQKA 143B_BOVIN__P29 0.084 20250.83 4 HLA-A*0101 SELVQKAK 143B_BOVIN__P29 0.017 41810.68 5 HLA-A*0101 ELVQKAKL 143B_BOVIN__P29 0.037 33651.40 6 HLA-A*0101 LVQKAKLA 143B_BOVIN__P29 0.059 26441.55
