Events News Research CBS CBS Publications Bioinformatics
Staff Contact About Internal CBS CBS Other

Version history


Please click on the version number to activate the corresponding server.

2.3 The current server (online since 08 Sept 2010). New in this version:
  • Method retrained on the version 2.2 data excluding data from the Mamu-A1*02601 allele due to data contamination. Also, the method has been updated to include the newest MHC allele releases from the IMGT/HLA and IPD-MHC databases (for non-human primates and pig). These updates include incoportation of the new nomemclature for HLA and Rhesus macaque (Mamu).
2.2 The current server (online since 01 Sept 2009). New in this version:
  • Method retrained on an extented data covering more than 100 MHC alleles and more than 110,000 peptide/MHC interactions.
2.1 The current server (online since 06 April 2009). New in this version:
  • Predicted binding score are shown as percent rank to a pool of 1000.000 random natural 9mer peptides. IC50 values are only shown for a set of white-listed alleles (mostly HLA-A and HLA-B alleles) where the values can be relied on.
2.0 The current server (online since 24 June, 2008). New in this version:
  • Binding predictions for all known MHC molecules including HLA-C, non-classical HLA (HLA-E and HLA-G), non-human primates, pig and mouse.
  • Prediction of performamce accuracy

Main publication:

  • NetMHCpan - MHC class I binding prediction beyond humans
    Ilka Hoof, Bjoern Peters, John Sidney, Lasse Eggers Pedersen, Ole Lund, Soren Buus, and Morten Nielsen
    Submitted.

1.1 Online from March 2007 til 24 of June, 2008). New in this version:
  • Includes prediction of peptides length 8-11 .

1.0 Original version (online version until March 2008, 2006):

Main publication:

  • NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence.
    Nielsen M, et al. (2007) PLoS ONE 2(8): e796. doi:10.1371/journal.pone.0000796 View the abstract, the full text version at PLoSONE: Full text, or Full text including supplementary materials: PDF_fulltext.pdf




GETTING HELP

Scientific problems:        Technical problems: