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NetNES 1.1 Server

NetNES 1.1 server predicts leucine-rich nuclear export signals (NES) in eukaryotic proteins using a combination of neural networks and hidden Markov models.

Instructions Output format Article abstract

SUBMISSION

Paste a single sequence or several sequences in FASTA format into the field below:

Submit a file in FASTA format directly from your local disk:

Generate graphics   

Restrictions:
At most 2000 sequences and 200,000 amino acids per submission; each sequence not less than 15 and not more than 6,000 amino acids. Different sequence names are required.

Confidentiality:
The sequences are kept confidential and will be deleted after processing.

CITATIONS

For publication of results, please cite:

Analysis and prediction of leucine-rich nuclear export signals
Tanja la Cour, Lars Kiemer, Anne Mølgaard, Ramneek Gupta, Karen Skriver and Søren Brunak
Protein Eng. Des. Sel., 17(6):527-36, 2004.

Download the paper.
Download the supplementary information.

View the abstract.

PORTABLE VERSION

Would you prefer to run NetNES at your own site?
NetNES 1.1 is available as a package on a commercial license. Currently available platforms include MIPS (under IRIX, Silicon Graphics), SPARC (under Solaris, Sun), Alpha (under OSF1) and Pentium family (under Linux and CYGWIN).
Send inquiries by e-mail to software@cbs.dtu.dk.

GETTING HELP

Scientific problems:        Technical problems:       

This file was last modified Friday 9th 2018f February 2018 10:14:20 GMT