Please note that this is an old version of NetOGlyc. The current version can be found at: http://www.cbs.dtu.dk/services/NetOGlyc/

NetOGlyc 2.0 Server The NetOglyc server produces neural network predictions of mucin type GalNAc O-glycosylation sites in mammalian proteins. The current version of NetOGlyc is available at: http://www.cbs.dtu.dk/services/NetOGlyc/

Instructions

Output format

O-GlycBase

Abstract

Mail server

CITATIONS

For publication of results, please cite: Prediction of O-glycosylation of mammalian proteins: Specificity patterns of UDP-GalNAc:-polypeptide N-acetylgalactosaminyltransferase. J.E. Hansen, O. Lund, J. Engelbrecht, H. Bohr, J.O. Nielsen, J-E.S. Hansen, and S. Brunak. Biochemical Journal: 308, 801-813, 1995. O-glycbase version 2.0 - A revised database of O-glycosylated proteins. J.E. Hansen, O. Lund, K. Rapacki and S. Brunak. Nucleic Acids Research, 25: 278-282, 1997. NetOglyc: Prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility. J.E. Hansen, O. Lund, N. Tolstrup, A.A. Gooley, K.L. Williams and S. Brunak. Glycoconjugate Journal, 15: 115-130, 1998.

PORTABLE VERSION

Would you prefer to run NetOGlyc at your own site? NetOGlyc 2.0 is available as a package on a commercial license. Currently available platforms include MIPS (under IRIX, Silicon Graphics), SPARC (under Solaris, Sun), Alpha (under OSF1) and Pentium family (under Linux). Send inquiries by e-mail to software@cbs.dtu.dk.

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