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NetSurfP - Protein Surface Accessibility and Secondary Structure Predictions

NetSurfP server predicts the surface accessibility and secondary structure of amino acids in an amino acid sequence.
The method also simultaneously predicts the reliability for each prediction, in the form of a Z-score.



Instructions Output format Article abstract

Paste in sequence data

or upload sequence data
Valid format examples: Fasta

All sequences must be submitted in amino acid format and have an unique sequence id! Contact bent@cbs.dtu.dk for questions or problems!

Addition to output

Show Secondary Structure Predictions
Instructions: Paste in or upload the input file and make sure to select correct format by checking the radio button, and that all sequences has an unique id.

Please read the CBS access policies for information about limitations on the daily number of submissions.

CITATIONS

For publication of results, please cite:

A generic method for assignment of reliability scores applied to solvent accessibility predictions.
Bent Petersen, Thomas Nordahl Petersen, Pernille Andersen, Morten Nielsen and Claus Lundegaard1.
BMC Structural Biology 2009, 9:51 doi:10.1186/1472-6807-9-51.


View the abstract: abstract

PORTABLE VERSION

Would you prefer to run NetSurfP at your own site?. Send inquiries by e-mail to software@cbs.dtu.dk.

GETTING HELP

Scientific problems:        Technical problems:       

This file was last modified Tuesday 9th of February 2010 08:49:30 GMT