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Databases


The databases are used for both the cross-hybridization and the low-complexity score calculations. The databases are all based on collections of sequences originating from the indicated organisms. Two types of sequence collections are being used: one type is based on the full genome sequence and possible pladsmids commonly hosted by that organism, alternatively a UniGene database is used.

The following species databases are currently available for OligoWiz 2:

Eukaryote

Species tree

Prokaryote



Eukaryotes

A. gambiae

The African malaria mosquito Anopheles gambiae database is based on the genbank entries NC_002084.1, NC_004818.1, NT_078267.2, NT_078268.1, NT_078266.1 and NT_078265.1 (downloaded 13th july 2004).

A. nidulans

The Aspergillus nidulans database is based on the aspergillus_nidulans_1.fasta.gz file found at Whitehead Institute Center for Genome Research (3th july 2003).

A. thaliana

The Arabidopsis thaliana database is based on the GenBank entries: NC_003070, NC_003071, NC_003074, NC_003075, NC_003076, NC_001284, and NC_000932, representing the five chromosomes, the chloroplast and the mitochondria genomes of the A. thaliana (Columbia cultivar). (The Arabidopsis genome sequencing initiative)

B. taurus (UniGene)

The Bos taurus (Cattle) database is based on the UniGene collection (Bt.seq.uniq, Sept. 2007).

C. briggsae

The Caenorhabditis briggsae database is based on the contigs from chromosomes and the mitochondria genome (as of Feb. 2006)
(Stein et al., PLoS Biol. 2003 1(2):E45. PMID: 14624247)

C. elegans

The Caenorhabditis elegans database is based on the GenBank entries NC_000965, NC_000966, NC_000967, NC_000968, NC_000969, NC_001130 and NC_001328, representing the C. elegans chromosomes and mitochondria genome. (The C. elegans Sequencing Consortium, Science. 1998 Dec 11;282(5396):2012-8)

C. familiaris (UniGene)

The Canis familiaris database is based on the C. familiaris UniGene collection (Cfa.seq.uniq, jan. 2005).

D. melanogaster

The Drosophila melanogaste database is based on the "large" and "small" scaffold collections (Science 287, 2185 (2000))

D. melanogaster (UniGene)

The Drosophila melanogaste UniGene database is based on the Drosophila melanogaste UniGene collection (Dm.seq.uniq, Feb. 2008)

G. gallus (UniGene)

The chicken Gallus gallus database is based on the UniGene collection (Gga.seq.uniq, Juli 2004)

G. max (UniGene)

The Glycine.max (soybean) database is based on the G. max UniGene collection (Gma.seq.uniq, Jan. 2005)

Human (UniGene)

The Homo sapiens database is based on the UniGene collection (Hs.seq.uniq, updated every second month)

H. vulgare (UniGene)

The Hordeum vulgare (barley) database is based on the UniGene collection (Hv.seq.uniq, Aug. 2003)

Mouse (UniGene)

The Mus musculus database is based on the UniGene collection (Mm.seq.uniq, Okt. 2003)

Macaca fascicularis (UniGene)

The Macaca fascicularis database is based on the UniGene collection (Mfa.seq.uniq, Sept. 2007)

Macaca mulatta (UniGene)

The Macaca mulatta database is based on the UniGene collection (Mmu.seq.uniq, Sept. 2007)

Rat (UniGene)

The Rattus norvegicus database is based on the UniGene collection (Rn.seq.uniq, Okt. 2003)

Rice (EST)

The Oryza sativa database is based on 207.504 rice EST sequences from both japonica and indica. The EST used sequences was downloaded from TIGR (updated 9.5.03 Rice.GB.EST.all.seq)

Ovis aries (Sheep, UniGene)

The Ovis aries database is based on the UniGene collection (Oar.seq.uniq, Sept. 2007)

S. cerevisiae

The Saccharomyces cerevisiae database is based on the GenBank entries NC_001133, NC_001134, NC_001135, NC_001136, NC_001137, NC_001138, NC_001139, NC_001140, NC_001141, NC_001142, NC_001143, NC_001144, NC_001145, NC_001146, NC_001147 and NC_001148, representing the S. cerevisiae chromosomes and mitochondria genome. (Goffeau et al. Science 274 (5287), 546 (1996))

S. pombe

The Schizosaccharomyces pombe database is based on the GenBank entries NC_003424,NC_003423 NC_003421 NC_001326.1 representing the S. pombe chromosomes and mitochondria genome.

S. scrofa (UniGene)

The Sus scrofa or pig database is based on the UniGene collection (Ssc.seq.uniq, Okt. 2003)

Takifugu rubripes (UniGene)

The Fugo (Takifugu rubripes) database is based on the UniGene collection (Tru.seq.uniq, Dec. 2004)

T. aestivum (UniGene)

The Triticum aestivum or wheat database is based on the wheat UniGene collection (Ta.seq.uniq, Aug. 2003)

X. laevis (UniGene)

The Xenopus laevis (UniGene) database is based on the X.laevis UniGene collection (Xl.seq.uniq, jan. 2005).


Prokaryotes

Acidobacteria bacterium Ellin345

The database was generated from the following GenBank entries:

  • CP000360: Acidobacteria bacterium Ellin345, complete genome.
[Taxonomy: Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae. ]

Acinetobacter baumannii

The database was generated from the following GenBank entries:

  • CT025832: Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance
  • CT025833: Acinetobacter baumannii str. SDF. Genomics of Multi-Drug Resistance
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Moraxellaceae; Acinetobacter. ]

Acinetobacter sp. ADP1

The database was generated from the following GenBank entries:

  • CR543861: Acinetobacter sp. ADP1 complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Moraxellaceae; Acinetobacter. ]

Aeropyrum pernix K1

The database was generated from the following GenBank entries:

  • BA000002: Aeropyrum pernix K1 DNA, complete genome.
[Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales;Desulfurococcaceae; Aeropyrum. ]

Agrobacterium tumefaciens str. C58

The database was generated from the following GenBank entries:

  • AE007869: Agrobacterium tumefaciens str. C58, complete genome.
  • AE007870: Agrobacterium tumefaciens str. C58 linear chromosome, complete
  • AE008688: Agrobacterium tumefaciens str. C58 circular chromosome, complete
  • AE008689: Agrobacterium tumefaciens str. C58 linear chromosome, complete
  • AE007871: Agrobacterium tumefaciens str. C58 plasmid Ti, complete genome.
  • AE007872: Agrobacterium tumefaciens str. C58 plasmid AT, complete genome.
  • AE008687: Agrobacterium tumefaciens str. C58 AT plasmid complete sequence.
  • AE008690: Agrobacterium tumefaciens str. C58 Ti plasmid, complete sequence.
  • AB016260: Agrobacterium tumefaciens plasmid pTi-SAKURA, complete sequence.
  • AF242881: Agrobacterium tumefaciens octopine-type Ti plasmid, complete
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. ]

Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444)

The database was generated from the following GenBank entries:

  • CP000117: Anabaena variabilis ATCC 29413 chromosome, complete sequence.
  • CP000119: Anabaena variabilis ATCC 29413 plasmid A, complete sequence.
  • CP000120: Anabaena variabilis ATCC 29413 plasmid B, complete sequence.
  • CP000121: Anabaena variabilis ATCC 29413 plasmid C, complete sequence.
[Taxonomy: Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena. ]

Anaeromyxobacter dehalogenans 2CP-C

The database was generated from the following GenBank entries:

  • CP000251: Anaeromyxobacter dehalogenans 2CP-C, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;Cystobacterineae; Myxococcaceae; Anaeromyxobacter. ]

Anaplasma marginale str. St. Maries

The database was generated from the following GenBank entries:

  • CP000030: Anaplasma marginale str. St. Maries, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Anaplasma. ]

Anaplasma phagocytophilum HZ

The database was generated from the following GenBank entries:

  • CP000235: Anaplasma phagocytophilum HZ, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Anaplasma; phagocytophilum group. ]

Aquifex aeolicus VF5

The database was generated from the following GenBank entries:

  • AE000657: Aquifex aeolicus VF5, complete genome.
  • AE000667: Aquifex aeolicus VF5 plasmid ece1, complete sequence.
[Taxonomy: Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex. ]

Archaeoglobus fulgidus DSM 4304

The database was generated from the following GenBank entries:

  • AE000782: Archaeoglobus fulgidus DSM 4304, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales;Archaeoglobaceae; Archaeoglobus. ]

Aster yellows witches'-broom phytoplasma AYWB

The database was generated from the following GenBank entries:

  • CP000061: Aster yellows witches'-broom phytoplasma AYWB, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Acholeplasmatales;Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasmaasteris. ]

Azoarcus sp. EbN1

The database was generated from the following GenBank entries:

  • CR555306: Azoarcus sp. EbN1 complete genome.
  • CR555307: Azoarcus sp. EbN1 plasmid 1.
  • CR555308: Azoarcus sp. EbN1 plasmid 2.
  • CR555307: Azoarcus sp. EbN1 plasmid 1.
  • CR555308: Azoarcus sp. EbN1 plasmid 2.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;Rhodocyclaceae; Azoarcus. ]

Bacillus anthracis str. 'Ames Ancestor'

The database was generated from the following GenBank entries:

  • AE017334: Bacillus anthracis str. 'Ames Ancestor', complete genome.
  • AE017336: Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete
  • AF065404: Bacillus anthracis virulence plasmid PX01, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus anthracis str. Ames

The database was generated from the following GenBank entries:

  • AE016879: Bacillus anthracis str. Ames, complete genome.
  • AF065404: Bacillus anthracis virulence plasmid PX01, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus anthracis str. Sterne

The database was generated from the following GenBank entries:

  • AE017225: Bacillus anthracis str. Sterne, complete genome.
  • AF065404: Bacillus anthracis virulence plasmid PX01, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus cereus ATCC 10987

The database was generated from the following GenBank entries:

  • AE017194: Bacillus cereus ATCC 10987, complete genome.
  • AE017195: Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus cereus ATCC 14579

The database was generated from the following GenBank entries:

  • AE016877: Bacillus cereus ATCC 14579, complete genome.
  • AE016878: Bacillus cereus ATCC 14579 plasmid pBClin15, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus cereus E33L

The database was generated from the following GenBank entries:

  • CP000001: Bacillus cereus E33L, complete genome.
  • CP000040: Bacillus cereus E33L plasmid pE33L466, complete sequence.
  • CP000041: Bacillus cereus E33L plasmid pE33L5, complete sequence.
  • CP000042: Bacillus cereus E33L plasmid pE33L54, complete sequence.
  • CP000043: Bacillus cereus E33L plasmid pE33L8, complete sequence.
  • CP000044: Bacillus cereus E33L plasmid pE33L9, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacillus clausii KSM-K16

The database was generated from the following GenBank entries:

  • AP006627: Bacillus clausii KSM-K16 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. ]

Bacillus halodurans C-125

The database was generated from the following GenBank entries:

  • BA000004: Bacillus halodurans C-125 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. ]

Bacillus licheniformis ATCC 14580 (DSM 13)

The database was generated from the following GenBank entries:

  • CP000002: Bacillus licheniformis ATCC 14580, complete genome.
  • AE017333: Bacillus licheniformis DSM 13, complete genome.
  • AE017333: Bacillus licheniformis DSM 13, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. ]

Bacillus subtilis subsp. subtilis str. 168

The database was generated from the following GenBank entries:

  • AL009126: Bacillus subtilis complete genome.
  • BSU32379: Bacillus subtilis plasmid pTA1015, complete sequence.
  • BSU32380: Bacillus subtilis plasmid pTA1060, complete sequence.
  • BSU32378: Bacillus subtilis plasmid pTA1040, complete sequence.
  • AF091592: Bacillus subtilis plasmid p1414, complete plasmid sequence.
  • BSU32379: Bacillus subtilis plasmid pTA1015, complete sequence.
  • BSU32378: Bacillus subtilis plasmid pTA1040, complete sequence.
  • AF091592: Bacillus subtilis plasmid p1414, complete plasmid sequence.
  • BSU32380: Bacillus subtilis plasmid pTA1060, complete sequence.
  • BSU32378: Bacillus subtilis plasmid pTA1040, complete sequence.
  • BSU32379: Bacillus subtilis plasmid pTA1015, complete sequence.
  • BSU32380: Bacillus subtilis plasmid pTA1060, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. ]

Bacillus thuringiensis serovar konkukian str. 97-27

The database was generated from the following GenBank entries:

  • AE017355: Bacillus thuringiensis serovar konkukian str. 97-27, complete
  • CP000047: Bacillus thuringiensis serovar konkukian str. 97-27 plasmid
  • AF202532: Bacillus thuringiensis plasmid pBMB9741, complete plasmid sequence.
  • AY138808: Bacillus thuringiensis strain 4Q2 plasmid pTX14-2, complete
  • BTMOB143: B.thuringiensis plasmid pTX14-3 DNA.
  • AY138808: Bacillus thuringiensis strain 4Q2 plasmid pTX14-2, complete
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacilluscereus group. ]

Bacteroides fragilis NCTC 9343

The database was generated from the following GenBank entries:

  • CR626927: Bacteroides fragilis NCTC 9343, complete genome.
  • CR626928: Bacteroides fragilis NCTC 9343 pBF9343 plasmid.
[Taxonomy: Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;Bacteroidaceae; Bacteroides. ]

Bacteroides fragilis YCH46

The database was generated from the following GenBank entries:

  • AP006841: Bacteroides fragilis YCH46 DNA, complete genome.
  • AP006842: Bacteroides fragilis YCH46 plasmid pBFY46 DNA, complete sequence.
[Taxonomy: Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;Bacteroidaceae; Bacteroides. ]

Bacteroides thetaiotaomicron VPI-5482

The database was generated from the following GenBank entries:

  • AE015928: Bacteroides thetaiotaomicron VPI-5482, complete genome.
  • AY171301: Bacteroides thetaiotaomicron VPI-5482 plasmid p5482, complete
[Taxonomy: Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;Bacteroidaceae; Bacteroides. ]

Bartonella henselae str. Houston-1

The database was generated from the following GenBank entries:

  • BX897699: Bartonella henselae strain Houston-1, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bartonellaceae; Bartonella. ]

Bartonella quintana str. Toulouse

The database was generated from the following GenBank entries:

  • BX897700: Bartonella quintana str. Toulouse, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bartonellaceae; Bartonella. ]

Baumannia cicadellinicola str. Hc (Homalodisca coagulata)

The database was generated from the following GenBank entries:

  • CP000238: Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Baumannia. ]

Bdellovibrio bacteriovorus HD100

The database was generated from the following GenBank entries:

  • BX842601: Bdellovibrio bacteriovorus complete genome, strain HD100.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales;Bdellovibrionaceae; Bdellovibrio. ]

Bifidobacterium longum NCC2705

The database was generated from the following GenBank entries:

  • AE014295: Bifidobacterium longum NCC2705, complete genome.
  • BLU76614: Bifdiobacterium longum plasmid pKJ50, complete sequence.
  • AF538868: Bifidobacterium longum plasmid pDOJH10L, complete sequence.
  • AF139129: Bifidobacterium longum plasmid pKJ36, complete sequence.
  • AF538868: Bifidobacterium longum plasmid pDOJH10L, complete sequence.
  • AF538869: Bifidobacterium longum plasmid pDOJH10S, complete sequence.
  • AY066026: Bifidobacterium longum plasmid pB44, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales;Bifidobacteriaceae; Bifidobacterium. ]

Bordetella bronchiseptica RB50

The database was generated from the following GenBank entries:

  • BX470250: Bordetella bronchiseptica strain RB50, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Alcaligenaceae; Bordetella. ]

Bordetella parapertussis 12822

The database was generated from the following GenBank entries:

  • BX470249: Bordetella parapertussis strain 12822, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Alcaligenaceae; Bordetella. ]

Bordetella pertussis Tohama I

The database was generated from the following GenBank entries:

  • BX470248: Bordetella pertussis strain Tohama I, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Alcaligenaceae; Bordetella. ]

Borrelia afzelii PKo

The database was generated from the following GenBank entries:

  • CP000395: Borrelia afzelii PKo, complete genome.
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia;Borrelia burgdorferi group. ]

Borrelia burgdorferi B31

The database was generated from the following GenBank entries:

  • AE000783: Borrelia burgdorferi B31, complete genome.
  • AE000791: Borrelia burgdorferi B31 plasmid cp9, complete sequence.
  • AE000792: Borrelia burgdorferi B31 plasmid cp26, complete sequence.
  • AE001575: Borrelia burgdorferi B31 plasmid cp32-1, complete sequence.
  • AE001576: Borrelia burgdorferi B31 plasmid cp32-3, complete sequence.
  • AE001577: Borrelia burgdorferi B31 plasmid cp32-4, complete sequence.
  • AE001578: Borrelia burgdorferi B31 plasmid cp32-6, complete sequence.
  • AE001579: Borrelia burgdorferi B31 plasmid cp32-7, complete sequence.
  • AE001580: Borrelia burgdorferi B31 plasmid cp32-8, complete sequence.
  • AE001581: Borrelia burgdorferi B31 plasmid cp32-9, complete sequence.
  • AE001583: Borrelia burgdorferi B31 plasmid lp5, complete sequence.
  • AE000793: Borrelia burgdorferi B31 plasmid lp17, complete sequence.
  • AE001582: Borrelia burgdorferi B31 plasmid lp21, complete sequence.
  • AE000785: Borrelia burgdorferi B31 plasmid lp25, complete sequence.
  • AE000794: Borrelia burgdorferi B31 plasmid lp28-1, complete sequence.
  • AE000786: Borrelia burgdorferi B31 plasmid lp28-2, complete sequence.
  • AE000784: Borrelia burgdorferi B31 plasmid lp28-3, complete sequence.
  • AE000789: Borrelia burgdorferi B31 plasmid lp28-4, complete sequence.
  • AE000788: Borrelia burgdorferi B31 plasmid lp36, complete sequence.
  • AE000787: Borrelia burgdorferi B31 plasmid lp38, complete sequence.
  • AE000790: Borrelia burgdorferi B31 plasmid lp54, complete sequence.
  • AE001584: Borrelia burgdorferi B31 plasmid lp56, complete sequence.
  • AE001584: Borrelia burgdorferi plasmid lp56, complete plasmid sequence.
  • BBU43414: Borrelia burgdorferi linear plasmid lp16 DNA, complete sequence.
  • AF169008: Borrelia burgdorferi circular plasmid cp18-2, complete sequence.
  • BBU03641: Borrelia burgdorferi Ip21 circular plasmid, complete sequence.
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia;Borrelia burgdorferi group. ]

Borrelia garinii PBi

The database was generated from the following GenBank entries:

  • CP000013: Borrelia garinii PBi, complete genome.
  • CP000014: Borrelia garinii PBi plasmid cp26, complete sequence.
  • CP000015: Borrelia garinii PBi plasmid lp54, complete sequence.
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia;Borrelia burgdorferi group. ]

Bradyrhizobium japonicum USDA 110

The database was generated from the following GenBank entries:

  • BA000040: Bradyrhizobium japonicum USDA 110 DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Bradyrhizobium. ]

Brucella abortus biovar 1 str. 9-941

The database was generated from the following GenBank entries:

  • AE017223: Brucella abortus biovar 1 str. 9-941 chromosome I, complete
  • AE017224: Brucella abortus biovar 1 str. 9-941 chromosome II, complete
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Brucellaceae; Brucella. ]

Brucella melitensis 16M

The database was generated from the following GenBank entries:

  • AE008918: Brucella melitensis 16M chromosome II, complete sequence.
  • AE008917: Brucella melitensis 16M chromosome I, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Brucellaceae; Brucella. ]

Brucella melitensis biovar Abortus (Brucella abortus)

The database was generated from the following GenBank entries:

  • AM040264: Brucella melitensis biovar Abortus chromosome I, complete sequence,
  • AM040265: Brucella melitensis biovar Abortus chromosome II, complete
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Brucellaceae; Brucella. ]

Brucella suis 1330

The database was generated from the following GenBank entries:

  • AE014292: Brucella suis 1330 chromosome II, complete sequence.
  • AE014291: Brucella suis 1330 chromosome I, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Brucellaceae; Brucella. ]

Buchnera aphidicola str. APS (Acyrthosiphon pisum)

The database was generated from the following GenBank entries:

  • BA000003: Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA,
  • AP001070: Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pTrp
  • AP001071: Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu
  • AP001070: Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pTrp
  • AP001070: Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pTrp
  • AP001071: Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Buchnera. ]

Buchnera aphidicola str. Bp (Baizongia pistaciae)

The database was generated from the following GenBank entries:

  • AE016826: Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome.
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Buchnera. ]

Buchnera aphidicola str. Sg (Schizaphis graminum)

The database was generated from the following GenBank entries:

  • AE013218: Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
  • AF041837: Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Buchnera. ]

Burkholderia cenocepacia AU 1054

The database was generated from the following GenBank entries:

  • CP000378: Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
  • CP000379: Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence.
  • CP000380: Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. ]

Burkholderia mallei ATCC 23344

The database was generated from the following GenBank entries:

  • CP000010: Burkholderia mallei ATCC 23344 chromosome 1, complete sequence.
  • CP000011: Burkholderia mallei ATCC 23344 chromosome 2, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia. ]

Burkholderia pseudomallei 1710b

The database was generated from the following GenBank entries:

  • CP000124: Burkholderia pseudomallei 1710b chromosome I, complete sequence.
  • CP000125: Burkholderia pseudomallei 1710b chromosome II, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia; pseudomallei group. ]

Burkholderia pseudomallei K96243

The database was generated from the following GenBank entries:

  • BX571966: Burkholderia pseudomallei strain K96243, chromosome 2, complete
  • BX571965: Burkholderia pseudomallei strain K96243, chromosome 1, complete
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia; pseudomallei group. ]

Burkholderia sp. 383

The database was generated from the following GenBank entries:

  • CP000151: Burkholderia sp. 383 chromosome 1, complete sequence.
  • CP000152: Burkholderia sp. 383 chromosome 2, complete sequence.
  • CP000150: Burkholderia sp. 383 chromosome 3, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. ]

Burkholderia thailandensis E264

The database was generated from the following GenBank entries:

  • CP000086: Burkholderia thailandensis E264 chromosome I, complete sequence.
  • CP000085: Burkholderia thailandensis E264 chromosome II, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia; pseudomallei group. ]

Burkholderia xenovorans LB400

The database was generated from the following GenBank entries:

  • CP000270: Burkholderia xenovorans LB400 chromosome 1, complete sequence.
  • CP000271: Burkholderia xenovorans LB400 chromosome 2, complete sequence.
  • CP000272: Burkholderia xenovorans LB400 chromosome 3, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Burkholderia. ]

Campylobacter jejuni RM1221

The database was generated from the following GenBank entries:

  • CP000025: Campylobacter jejuni RM1221, complete genome.
  • AF301164: Campylobacter jejuni plasmid pCJ01, complete sequence.
  • AY701528: Campylobacter jejuni plasmid pCG8245, partial sequence.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Campylobacteraceae; Campylobacter. ]

Campylobacter jejuni subsp. jejuni NCTC 11168

The database was generated from the following GenBank entries:

  • AL111168: Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.
  • AF301164: Campylobacter jejuni plasmid pCJ01, complete sequence.
  • AY701528: Campylobacter jejuni plasmid pCG8245, partial sequence.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Campylobacteraceae; Campylobacter. ]

Candidatus Blochmannia floridanus

The database was generated from the following GenBank entries:

  • BX248583: Blochmannia floridanus complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; ant endosymbionts; Candidatus Blochmannia. ]

Candidatus Blochmannia pennsylvanicus str. BPEN

The database was generated from the following GenBank entries:

  • CP000016: Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; ant endosymbionts; Candidatus Blochmannia. ]

Candidatus Carsonella ruddii PV

The database was generated from the following GenBank entries:

  • AP009180: Candidatus Carsonella ruddii PV DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; CandidatusCarsonella. ]

Candidatus Pelagibacter ubique HTCC1062

The database was generated from the following GenBank entries:

  • CP000084: Candidatus Pelagibacter ubique HTCC1062, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; SAR11cluster; Candidatus Pelagibacter. ]

Carboxydothermus hydrogenoformans Z-2901

The database was generated from the following GenBank entries:

  • CP000141: Carboxydothermus hydrogenoformans Z-2901, complete genome.
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;Carboxydothermus. ]

Caulobacter crescentus CB15

The database was generated from the following GenBank entries:

  • AE005673: Caulobacter crescentus CB15 complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;Caulobacteraceae; Caulobacter. ]

Chlamydia muridarum Nigg

The database was generated from the following GenBank entries:

  • AE002160: Chlamydia muridarum Nigg, complete genome.
  • AE002162: Chlamydia muridarum Nigg plasmid pMoPn, complete sequence.
  • AE002162: Chlamydia muridarum Nigg plasmid pMoPn, complete sequence.
  • AE002162: Chlamydia muridarum Nigg plasmid pMoPn, complete sequence.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia. ]

Chlamydia trachomatis A/HAR-13

The database was generated from the following GenBank entries:

  • CP000051: Chlamydia trachomatis A/HAR-13, complete genome.
  • CP000052: Chlamydia trachomatis A/HAR-13 plasmid pCTA, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia. ]

Chlamydia trachomatis D/UW-3/CX

The database was generated from the following GenBank entries:

  • AE001273: Chlamydia trachomatis D/UW-3/CX, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia. ]

Chlamydophila abortus S26/3

The database was generated from the following GenBank entries:

  • CR848038: Chlamydophila abortus strain S26/3, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila caviae GPIC

The database was generated from the following GenBank entries:

  • AE015925: Chlamydophila caviae GPIC, complete genome.
  • AE015926: Chlamydophila caviae GPIC plasmid pCpGP1, complete sequence.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila felis Fe/C-56

The database was generated from the following GenBank entries:

  • AP006861: Chlamydophila felis Fe/C-56 DNA, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila pneumoniae AR39 (Chlamydia pneumoniae AR39)

The database was generated from the following GenBank entries:

  • AE002161: Chlamydophila pneumoniae AR39, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila pneumoniae CWL029

The database was generated from the following GenBank entries:

  • AE001363: Chlamydophila pneumoniae CWL029, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila pneumoniae J138

The database was generated from the following GenBank entries:

  • BA000008: Chlamydophila pneumoniae J138 genomic DNA, complete sequence.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlamydophila pneumoniae TW-183

The database was generated from the following GenBank entries:

  • AE009440: Chlamydophila pneumoniae TW-183, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. ]

Chlorobium chlorochromatii CaD3

The database was generated from the following GenBank entries:

  • CP000108: Chlorobium chlorochromatii CaD3, complete genome.
[Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;Chlorobium/Pelodictyon group; Chlorobium. ]

Chlorobium tepidum TLS

The database was generated from the following GenBank entries:

  • AE006470: Chlorobium tepidum TLS, complete genome.
[Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;Chlorobaculum. ]

Chromobacterium violaceum ATCC 12472

The database was generated from the following GenBank entries:

  • AE016825: Chromobacterium violaceum ATCC 12472, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales;Neisseriaceae; Chromobacterium. ]

Chromohalobacter salexigens DSM 3043

The database was generated from the following GenBank entries:

  • CP000285: Chromohalobacter salexigens DSM 3043, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;Halomonadaceae; Chromohalobacter. ]

Clostridium acetobutylicum ATCC 824

The database was generated from the following GenBank entries:

  • AE001437: Clostridium acetobutylicum ATCC 824, complete genome.
  • AE001438: Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
  • AE001438: Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;Clostridium. ]

Clostridium difficile QCD-32g58

The database was generated from the following GenBank entries:

  • CM000287: Clostridium difficile QCD-32g58 chromosome, whole genome shotgun
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;Clostridium. ]

Clostridium perfringens str. 13

The database was generated from the following GenBank entries:

  • BA000016: Clostridium perfringens str. 13 DNA, complete genome.
  • AP003515: Clostridium perfringens str. 13 plasmid pCP13 DNA, complete
  • AP003515: Clostridium perfringens str. 13 plasmid pCP13 DNA, complete
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;Clostridium. ]

Clostridium tetani E88

The database was generated from the following GenBank entries:

  • AE015927: Clostridium tetani E88, complete genome.
  • AF528097: Clostridium tetani E88 plasmid pE88, complete sequence.
  • AF528097: Clostridium tetani E88 plasmid pE88, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;Clostridium. ]

Colwellia psychrerythraea 34H

The database was generated from the following GenBank entries:

  • CP000083: Colwellia psychrerythraea 34H, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Colwelliaceae; Colwellia. ]

Corynebacterium diphtheriae NCTC 13129

The database was generated from the following GenBank entries:

  • BX248353: Corynebacterium diphtheriae NCTC 13129, complete genome.
  • AY061891: Corynebacterium diphtheriae plasmid pNGA2, complete sequence.
  • AF492560: Corynebacterium diphtheriae plasmid pNG2, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Corynebacteriaceae; Corynebacterium. ]

Corynebacterium efficiens YS-314

The database was generated from the following GenBank entries:

  • BA000035: Corynebacterium efficiens YS-314 DNA, complete genome.
  • AP005225: Corynebacterium efficiens plasmid pCE2 DNA, complete sequence.
  • AP005226: Corynebacterium efficiens plasmid pCE3 DNA, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Corynebacteriaceae; Corynebacterium. ]

Corynebacterium glutamicum ATCC 13032

The database was generated from the following GenBank entries:

  • BA000036: Corynebacterium glutamicum ATCC 13032 DNA, complete genome.
  • BX927147: Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
  • COGAM330: Corynebacterium glutamicum plasmid pAM330 DNA, complete sequence.
  • AF092037: Corynebacterium glutamicum plasmid pBl1, complete sequence.
  • CGL420072: Corynebacterium glutamicum plasmid pTET3.
  • CGU85507: Corynebacterium glutamicum plasmid pXZ10145.1 putative replicase
  • AF479770: Corynebacterium glutamicum 227 plasmid pXZ608, complete sequence.
  • CGPSR1CG: C.glutamicum plasmid pSR1 complete genome.
  • AY172687: Corynebacterium glutamicum plasmid pGA2, complete sequence.
  • AF164956: Corynebacterium glutamicum strain ATCC31830 R-plasmid pCG4,
  • COGAM330: Corynebacterium glutamicum plasmid pAM330 DNA, complete sequence.
  • BLPLASM1: Brevibacterium lactofermentum ATCC 13869 native 4.45 kb plasmid.
  • AF121000: Corynebacterium glutamicum strain 22243 R-plasmid pAG1, complete
  • CGU85507: Corynebacterium glutamicum plasmid pXZ10145.1 putative replicase
  • CGPXZ: C.glutamicum plasmid (pXZ10142) DNA.
  • AY172684: Corynebacterium glutamicum plasmid pAG3, complete sequence.
  • AY172685: Corynebacterium glutamicum plasmid pCG2, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Corynebacteriaceae; Corynebacterium. ]

Corynebacterium jeikeium K411

The database was generated from the following GenBank entries:

  • CR931997: Corynebacterium jeikeium K411 complete genome.
  • AF401314: Corynebacterium jeikeium K411 plasmid pKW4, complete sequence.
  • AF401314: Corynebacterium jeikeium K411 plasmid pKW4, complete sequence.
  • AY048596: Corynebacterium jeikeium plasmid pCJ84, complete sequence.
  • AF364477: Corynebacterium jeikeium plasmid pK43, complete sequence.
  • AY079086: Corynebacterium jeikeium plasmid pK64, complete sequence.
  • AF486522: Corynebacterium jeikeium plasmid pB85766, complete sequence.
  • AY079086: Corynebacterium jeikeium plasmid pK64, complete sequence.
  • AF486522: Corynebacterium jeikeium plasmid pB85766, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Corynebacteriaceae; Corynebacterium. ]

Coxiella burnetii RSA 493

The database was generated from the following GenBank entries:

  • AE016828: Coxiella burnetii RSA 493, complete genome.
  • AE016829: Coxiella burnetii strain RSA 493 plasmid pQpH1, complete sequence.
  • AF131076: Coxiella burnetii strain R1140 plasmid QpDV, complete sequence.
  • CBQPH1: C.burnetii QpH1 plasmid, complete genomic sequence.
  • AF131076: Coxiella burnetii strain R1140 plasmid QpDV, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales;Coxiellaceae; Coxiella. ]

Dechloromonas aromatica RCB

The database was generated from the following GenBank entries:

  • CP000089: Dechloromonas aromatica RCB, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;Rhodocyclaceae; Dechloromonas. ]

Dehalococcoides ethenogenes 195

The database was generated from the following GenBank entries:

  • CP000027: Dehalococcoides ethenogenes 195, complete genome.
[Taxonomy: Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides. ]

Dehalococcoides sp. CBDB1

The database was generated from the following GenBank entries:

  • AJ965256: Dehalococcoides sp. CBDB1 complete genome.
[Taxonomy: Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides. ]

Deinococcus geothermalis DSM 11300

The database was generated from the following GenBank entries:

  • CP000359: Deinococcus geothermalis DSM 11300, complete genome.
  • CP000358: Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence.
[Taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales;Deinococcaceae; Deinococcus. ]

Deinococcus radiodurans R1

The database was generated from the following GenBank entries:

  • AE001825: Deinococcus radiodurans R1 chromosome 2, complete sequence.
  • AE000513: Deinococcus radiodurans R1 chromosome 1, complete sequence.
  • AE001826: Deinococcus radiodurans R1 plasmid MP1, complete sequence.
  • AE001827: Deinococcus radiodurans R1 plasmid CP1, complete sequence.
  • AE001827: Deinococcus radiodurans R1 plasmid CP1, complete sequence.
  • AE001826: Deinococcus radiodurans R1 plasmid MP1, complete sequence.
[Taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales;Deinococcaceae; Deinococcus. ]

Desulfitobacterium hafniense Y51

The database was generated from the following GenBank entries:

  • AP008230: Desulfitobacterium hafniense Y51 genomic DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;Desulfitobacterium. ]

Desulfotalea psychrophila LSv54

The database was generated from the following GenBank entries:

  • CR522870: Desulfotalea psychrophila LSv54 chromosome.
  • CR522871: Desulfotalea psychrophila LSv54, large plasmid.
  • CR522872: Desulfotalea psychrophila, small plasmid.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;Desulfobulbaceae; Desulfotalea. ]

Desulfovibrio desulfuricans G20

The database was generated from the following GenBank entries:

  • CP000112: Desulfovibrio desulfuricans G20, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;Desulfovibrionaceae; Desulfovibrio. ]

Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

The database was generated from the following GenBank entries:

  • AE017285: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
  • AE017286: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;Desulfovibrionaceae; Desulfovibrio. ]

Ehrlichia canis str. Jake

The database was generated from the following GenBank entries:

  • CP000107: Ehrlichia canis str. Jake, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Ehrlichia. ]

Ehrlichia chaffeensis str. Arkansas

The database was generated from the following GenBank entries:

  • CP000236: Ehrlichia chaffeensis str. Arkansas, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Ehrlichia. ]

Ehrlichia ruminantium str. Gardel

The database was generated from the following GenBank entries:

  • CR925677: Ehrlichia ruminantium str. Gardel, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Ehrlichia. ]

Ehrlichia ruminantium str. Welgevonden

The database was generated from the following GenBank entries:

  • CR767821: Ehrlichia ruminantium strain Welgevonden, complete genome.
  • CR925678: Ehrlichia ruminantium str. Welgevonden, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Ehrlichia. ]

Enterococcus faecalis V583

The database was generated from the following GenBank entries:

  • AE016830: Enterococcus faecalis V583, complete genome.
  • AE016833: Enterococcus faecalis V583 plasmid pTEF1, complete sequence.
  • AE016831: Enterococcus faecalis V583 plasmid pTEF2, complete sequence.
  • AE016832: Enterococcus faecalis V583 plasmid pTEF3, complete sequence.
  • AF164559: Enterococcus faecalis plasmid pEF1071, complete sequence.
  • AF503772: Enterococcus faecalis plasmid pAMalpha1, complete sequence.
  • AE002565: Enterococcus faecalis plasmid pAM373, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Enterococcaceae;Enterococcus. ]

Erwinia carotovora subsp. atroseptica SCRI1043

The database was generated from the following GenBank entries:

  • BX950851: Erwinia carotovora subsp. atroseptica SCRI1043, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Pectobacterium. ]

Erythrobacter litoralis HTCC2594

The database was generated from the following GenBank entries:

  • CP000157: Erythrobacter litoralis HTCC2594, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;Erythrobacteraceae; Erythrobacter. ]

Escherichia coli.

The database was generated from the following GenBank entries:

  • NARA01: Escherichia coli K-12 W3110 complete genome.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli 536

The database was generated from the following GenBank entries:

  • CP000247: Escherichia coli 536, complete genome.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli CFT073

The database was generated from the following GenBank entries:

  • AE014075: Escherichia coli CFT073, complete genome.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli K12

The database was generated from the following GenBank entries:

  • U00096: Escherichia coli K12 MG1655, complete genome.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli O157:H7 EDL933

The database was generated from the following GenBank entries:

  • AE005174: Escherichia coli O157:H7 EDL933, complete genome.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli O157:H7 str. Sakai

The database was generated from the following GenBank entries:

  • BA000007: Escherichia coli O157:H7 str. Sakai DNA, complete genome.
  • AB011549: Escherichia coli O157:H7 str. Sakai plasmid pO157 DNA, complete
  • AB011549: Escherichia coli O157:H7 str. Sakai plasmid pO157 DNA, complete
  • AB011548: Escherichia coli O157:H7 str. Sakai plasmid pOSAK1 DNA, complete
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Escherichia coli UTI89

The database was generated from the following GenBank entries:

  • CP000243: Escherichia coli UTI89, complete genome.
  • CP000244: Escherichia coli UTI89 plasmid pUTI89, complete sequence.
  • AF197335: Escherichia coli pCol-let plasmid, complete plasmid sequence.
  • AF251289: Escherichia coli plasmid pLG13, complete sequence.
  • ECO277653: Escherichia coli plasmid pGBG1.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • AY167049: Escherichia coli invasion plasmid pIS2, complete sequence.
  • ECPCLO13: Bacteriocinogenic plasmid CloDF13 complete nucleotide sequence.
  • AP002527: Escherichia coli plasmid R721 genomic DNA, comlete sequence.
  • ECO438270: Escherichia coli pCA4 plasmid microsatellite.
  • AB040037: Escherichia coli plasmid p9705 DNA, complete sequence.
  • ECPECO29: Escherichia coli plasmid pECO29 DNA, complete sequence.
  • AB024946: Escherichia coli plasmid pB171 DNA, complete sequence.
  • ECU81610: Escherichia coli plasmid pKL1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Escherichia. ]

Francisella tularensis subsp. holarctica

The database was generated from the following GenBank entries:

  • AM233362: Francisella tularensis subsp. holarctica strain LVS complete
  • AF055345: Francisella tularensi plasmid pOM1, complete sequence.
  • AF055345: Francisella tularensi plasmid pOM1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;Francisellaceae; Francisella. ]

Francisella tularensis subsp. tularensis SCHU S4

The database was generated from the following GenBank entries:

  • AJ749949: Francisella tularensis subsp. tularensis SCHU S4 complete genome.
  • AF055345: Francisella tularensi plasmid pOM1, complete sequence.
  • AF055345: Francisella tularensi plasmid pOM1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;Francisellaceae; Francisella. ]

Frankia sp. CcI3

The database was generated from the following GenBank entries:

  • CP000249: Frankia sp. CcI3, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Frankineae; Frankiaceae; Frankia. ]

Fusobacterium nucleatum subsp. nucleatum ATCC 25586

The database was generated from the following GenBank entries:

  • AE009951: Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete
  • AF295336: Fusobacterium nucleatum plasmid pKH9, complete sequence.
  • AF022647: Fusobacterium nucleatum plasmid pPA52, complete sequence.
  • AF295336: Fusobacterium nucleatum plasmid pKH9, complete sequence.
  • AF159249: Fusobacterium nucleatum plasmid pFN1, complete sequence.
  • AF022647: Fusobacterium nucleatum plasmid pPA52, complete sequence.
[Taxonomy: Bacteria; Fusobacteria; Fusobacterales; Fusobacteriaceae;Fusobacterium. ]

Geobacillus kaustophilus HTA426

The database was generated from the following GenBank entries:

  • BA000043: Geobacillus kaustophilus HTA426 DNA, complete genome.
  • AP006520: Geobacillus kaustophilus HTA426 plasmid pHTA426 DNA, complete
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Geobacillus. ]

Geobacter metallireducens GS-15

The database was generated from the following GenBank entries:

  • CP000148: Geobacter metallireducens GS-15, complete genome.
  • CP000149: Geobacter metallireducens GS-15 plasmid, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;Geobacteraceae; Geobacter. ]

Geobacter sulfurreducens PCA

The database was generated from the following GenBank entries:

  • AE017180: Geobacter sulfurreducens PCA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;Geobacteraceae; Geobacter. ]

Gloeobacter violaceus PCC 7421

The database was generated from the following GenBank entries:

  • BA000045: Gloeobacter violaceus PCC 7421 DNA, complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales;Gloeobacter. ]

Gluconobacter oxydans 621H

The database was generated from the following GenBank entries:

  • CP000009: Gluconobacter oxydans 621H, complete genome.
  • GOX428837: Gluconobacter oxydans DSM 3504 plasmid pGO128, complete sequence.
  • AB086443: Gluconobacter oxydans plasmid pAG5 DNA, complete sequence.
  • GOX428837: Gluconobacter oxydans DSM 3504 plasmid pGO128, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;Acetobacteraceae; Gluconobacter. ]

Haemophilus ducreyi 35000HP

The database was generated from the following GenBank entries:

  • AE017143: Haemophilus ducreyi strain 35000HP complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;Pasteurellaceae; Haemophilus. ]

Haemophilus influenzae 86-028NP

The database was generated from the following GenBank entries:

  • CP000057: Haemophilus influenzae strain 86-028NP, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;Pasteurellaceae; Haemophilus. ]

Haemophilus influenzae Rd KW20

The database was generated from the following GenBank entries:

  • L42023: Haemophilus influenzae Rd KW20, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;Pasteurellaceae; Haemophilus. ]

Hahella chejuensis KCTC 2396

The database was generated from the following GenBank entries:

  • CP000155: Hahella chejuensis KCTC 2396, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;Hahellaceae; Hahella. ]

Haloarcula marismortui ATCC 43049

The database was generated from the following GenBank entries:

  • AY596297: Haloarcula marismortui ATCC 43049 chromosome I, complete sequence.
  • AY596298: Haloarcula marismortui ATCC 43049 chromosome II, complete sequence.
  • AY596290: Haloarcula marismortui ATCC 43049 plasmid pNG100, complete
  • AY596291: Haloarcula marismortui ATCC 43049 plasmid pNG200, complete
  • AY596292: Haloarcula marismortui ATCC 43049 plasmid pNG300, complete
  • AY596293: Haloarcula marismortui ATCC 43049 plasmid pNG400, complete
  • AY596294: Haloarcula marismortui ATCC 43049 plasmid pNG500, complete
  • AY596295: Haloarcula marismortui ATCC 43049 plasmid pNG600, complete
  • AY596296: Haloarcula marismortui ATCC 43049 plasmid pNG700, complete
[Taxonomy: Archaea; Euryarchaeota; Halobacteria; Halobacteriales;Halobacteriaceae; Haloarcula. ]

Halobacterium sp. NRC-1

The database was generated from the following GenBank entries:

  • AE004437: Halobacterium sp. NRC-1 complete genome.
  • AE004438: Halobacterium sp. NRC-1 plasmid pNRC200 complete genome.
  • AF016485: Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence.
  • AF016485: Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence.
  • AE004438: Halobacterium sp. NRC-1 plasmid pNRC200 complete genome.
[Taxonomy: Archaea; Euryarchaeota; Halobacteria; Halobacteriales;Halobacteriaceae; Halobacterium. ]

Helicobacter hepaticus ATCC 51449

The database was generated from the following GenBank entries:

  • AE017125: Helicobacter hepaticus ATCC 51449, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae; Helicobacter. ]

Helicobacter pylori 26695

The database was generated from the following GenBank entries:

  • AE000511: Helicobacter pylori 26695, complete genome.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF275307: Helicobacter pylori plasmid pHPM8, complete sequence.
  • AF469112: Helicobacter pylori plasmid pHel4 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • AF469113: Helicobacter pylori plasmid pHel5 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • U12689: Helicobacter pylori plasmid pHPM180, complete sequence.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF056496: Helicobacter pylori plasmid pHPO100, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae; Helicobacter. ]

Helicobacter pylori HPAG1

The database was generated from the following GenBank entries:

  • CP000241: Helicobacter pylori HPAG1, complete genome.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF275307: Helicobacter pylori plasmid pHPM8, complete sequence.
  • AF469112: Helicobacter pylori plasmid pHel4 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • AF469113: Helicobacter pylori plasmid pHel5 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • U12689: Helicobacter pylori plasmid pHPM180, complete sequence.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF056496: Helicobacter pylori plasmid pHPO100, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae; Helicobacter. ]

Helicobacter pylori J99

The database was generated from the following GenBank entries:

  • AE001439: Helicobacter pylori J99, complete genome.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF275307: Helicobacter pylori plasmid pHPM8, complete sequence.
  • AF469112: Helicobacter pylori plasmid pHel4 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • AF469113: Helicobacter pylori plasmid pHel5 complete sequence.
  • AF077006: Helicobacter pylori plasmid pHPM186, complete sequence.
  • U12689: Helicobacter pylori plasmid pHPM180, complete sequence.
  • AF027303: Helicobacter pylori plasmid pHP489, complete plasmid sequence.
  • AF056496: Helicobacter pylori plasmid pHPO100, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae; Helicobacter. ]

Idiomarina loihiensis L2TR

The database was generated from the following GenBank entries:

  • AE017340: Idiomarina loihiensis L2TR, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Idiomarinaceae; Idiomarina. ]

Jannaschia sp. CCS1

The database was generated from the following GenBank entries:

  • CP000264: Jannaschia sp. CCS1, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;Rhodobacteraceae; Jannaschia. ]

Lactobacillus acidophilus NCFM

The database was generated from the following GenBank entries:

  • CP000033: Lactobacillus acidophilus NCFM, complete genome.
  • AB081463: Lactobacillus acidophilus plasmid pLA103 DNA, complete sequence.
  • D88438: Lactobacillus acidophilus plasmid pLA106 DNA, complete sequence.
  • AB081463: Lactobacillus acidophilus plasmid pLA103 DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842

The database was generated from the following GenBank entries:

  • CR954253: Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 complete
  • LDLPWS58: L.delbrueckii sp. lactis plasmid pWS58 DNA, complete genome.
  • LDLPWS58: L.delbrueckii sp. lactis plasmid pWS58 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactobacillus johnsonii NCC 533

The database was generated from the following GenBank entries:

  • AE017198: Lactobacillus johnsonii NCC 533, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactobacillus plantarum WCFS1

The database was generated from the following GenBank entries:

  • AL935263: Lactobacillus plantarum strain WCFS1, complete genome.
  • AF440277: Lactobacillus plantarum plasmid pMD5057, complete sequence.
  • AY096005: Lactobacillus plantarum plasmid pLP9000, complete sequence.
  • AY096004: Lactobacillus plantarum plasmid pLP2000, complete sequence.
  • AB024514: Lactobacillus plantarum plasmid pLTK2, complete sequence.
  • AB024514: Lactobacillus plantarum plasmid pLTK2, complete sequence.
  • AY096004: Lactobacillus plantarum plasmid pLP2000, complete sequence.
  • AY096005: Lactobacillus plantarum plasmid pLP9000, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactobacillus sakei subsp. sakei 23K

The database was generated from the following GenBank entries:

  • CR936503: Lactobacillus sakei strain 23K complete genome.
  • CR936503: Lactobacillus sakei strain 23K complete genome.
  • AF438419: Lactobacillus sakei plasmid pRV500, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactobacillus salivarius subsp. salivarius UCC118

The database was generated from the following GenBank entries:

  • CP000233: Lactobacillus salivarius subsp. salivarius UCC118, complete genome.
  • AF488831: Lactobacillus salivarius subsp. salivarius UCC118 plasmid
  • AF488832: Lactobacillus salivarius subsp. salivarius plasmid pSF118-44,
  • CP000234: Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;Lactobacillus. ]

Lactococcus lactis subsp. cremoris

The database was generated from the following GenBank entries:

  • LLREPBGNA: L.lactis repB gene.
  • AF247159: Lactococcus lactis subsp. cremoris plasmid pHP003, complete
  • AF036485: Lactococcus lactis subsp. cremoris plasmid pNZ4000, complete
  • AY026767: Lactococcus lactis subsp. cremoris strain P8-2-47 plasmid pBM02,
  • AF036485: Lactococcus lactis subsp. cremoris plasmid pNZ4000, complete
  • AF380336: Lactococcus lactis plasmid pCRL291.1, complete sequence.
  • AF380336: Lactococcus lactis plasmid pCRL291.1, complete sequence.
  • AF207855: Lactococcus lactis plasmid pAH33, complete sequence.
  • AF153414: Lactococcus lactis plasmid pCIS3, complete sequence.
  • AF116286: Lactococcus lactis plasmid pIL105, complete sequence.
  • U16027: Lactococcus lactis plasmid pSRQ700, complete sequence.
  • U35629: Lactococcus lactis plasmid pSRQ800, complete sequence.
  • AF409136: Lactococcus lactis citrate permease plasmid pCRL1127, complete
  • AF001314: Lactococcus lactis plasmid pSRQ900, complete sequence.
  • LLLPK214: Lactococcus lactis sp. lactis plasmid pK214 complete genome.
  • AE001272: Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid
  • LLREPA: L.lactis plasmid pWV01 RepA gene for replication protein A, and
  • U44843: Lactococcus lactis plasmid pND324, complete sequence.
  • AF116286: Lactococcus lactis plasmid pIL105, complete sequence.
  • AE001272: Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid
  • AF207855: Lactococcus lactis plasmid pAH33, complete sequence.
  • AF409136: Lactococcus lactis citrate permease plasmid pCRL1127, complete
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Lactococcus. ]

Lactococcus lactis subsp. lactis Il1403

The database was generated from the following GenBank entries:

  • AE005176: Lactococcus lactis subsp. lactis IL1403, complete genome.
  • AF380336: Lactococcus lactis plasmid pCRL291.1, complete sequence.
  • AF380336: Lactococcus lactis plasmid pCRL291.1, complete sequence.
  • AF207855: Lactococcus lactis plasmid pAH33, complete sequence.
  • AF153414: Lactococcus lactis plasmid pCIS3, complete sequence.
  • AF116286: Lactococcus lactis plasmid pIL105, complete sequence.
  • U16027: Lactococcus lactis plasmid pSRQ700, complete sequence.
  • U35629: Lactococcus lactis plasmid pSRQ800, complete sequence.
  • AF409136: Lactococcus lactis citrate permease plasmid pCRL1127, complete
  • AF001314: Lactococcus lactis plasmid pSRQ900, complete sequence.
  • LLLPK214: Lactococcus lactis sp. lactis plasmid pK214 complete genome.
  • AE001272: Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid
  • LLREPA: L.lactis plasmid pWV01 RepA gene for replication protein A, and
  • U44843: Lactococcus lactis plasmid pND324, complete sequence.
  • AF116286: Lactococcus lactis plasmid pIL105, complete sequence.
  • AE001272: Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid
  • AF207855: Lactococcus lactis plasmid pAH33, complete sequence.
  • AF409136: Lactococcus lactis citrate permease plasmid pCRL1127, complete
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Lactococcus. ]

Lawsonia intracellularis PHE/MN1-00

The database was generated from the following GenBank entries:

  • AM180252: Lawsonia intracellularis PHE/MN1-00.
  • AM180253: Lawsonia intracellularis PHE/MN1-00 plasmid 1.
  • AM180254: Lawsonia intracellularis PHE/MN1-00 plasmid 2.
  • AM180255: Lawsonia intracellularis PHE/MN1-00 plasmid 3.
  • AM180253: Lawsonia intracellularis PHE/MN1-00 plasmid 1.
  • AM180254: Lawsonia intracellularis PHE/MN1-00 plasmid 2.
  • AM180255: Lawsonia intracellularis PHE/MN1-00 plasmid 3.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;Desulfovibrionaceae; Lawsonia. ]

Legionella pneumophila str. Lens

The database was generated from the following GenBank entries:

  • CR628337: Legionella pneumophila str. Lens complete genome.
  • CR628339: Legionella pneumophila str. Lens plasmid pLPL, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales;Legionellaceae; Legionella. ]

Legionella pneumophila str. Paris

The database was generated from the following GenBank entries:

  • CR628336: Legionella pneumophila str. Paris complete genome.
  • CR628338: Legionella pneumophila str. Paris plasmid pLPP, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales;Legionellaceae; Legionella. ]

Legionella pneumophila subsp. pneumophila str. Philadelphia 1

The database was generated from the following GenBank entries:

  • AE017354: Legionella pneumophila subsp. pneumophila str. Philadelphia 1,
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales;Legionellaceae; Legionella. ]

Leifsonia xyli subsp. xyli str. CTCB07

The database was generated from the following GenBank entries:

  • AE016822: Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Micrococcineae; Microbacteriaceae; Leifsonia. ]

Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

The database was generated from the following GenBank entries:

  • AE016823: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
  • AE016824: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Leptospiraceae; Leptospira. ]

Leptospira interrogans serovar Lai str. 56601

The database was generated from the following GenBank entries:

  • AE010300: Leptospira interrogans serovar lai str. 56601 chromosome I,
  • AE010301: Leptospira interrogans serovar Lai str. 56601 chromosome II,
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Leptospiraceae; Leptospira. ]

Listeria innocua Clip11262

The database was generated from the following GenBank entries:

  • AL592022: Listeria innocua Clip11262 complete genome.
  • LISINP100: Listeria innocua plasmid pLI100, complete sequence.
  • LISINP100: Listeria innocua plasmid pLI100, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria. ]

Listeria monocytogenes EGD-e

The database was generated from the following GenBank entries:

  • AL591824: Listeria monocytogenes strain EGD, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria. ]

Listeria monocytogenes str. 4b F2365

The database was generated from the following GenBank entries:

  • AE017262: Listeria monocytogenes str. 4b F2365, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria. ]

Magnetospirillum magneticum AMB-1

The database was generated from the following GenBank entries:

  • AP007255: Magnetospirillum magneticum AMB-1 DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;Rhodospirillaceae; Magnetospirillum. ]

Mannheimia succiniciproducens MBEL55E

The database was generated from the following GenBank entries:

  • AE016827: Mannheimia succiniciproducens MBEL55E, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;Pasteurellaceae; Mannheimia. ]

Mesoplasma florum L1

The database was generated from the following GenBank entries:

  • AE017263: Mesoplasma florum L1 complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Entomoplasmatales;Entomoplasmataceae; Mesoplasma. ]

Mesorhizobium loti MAFF303099

The database was generated from the following GenBank entries:

  • BA000013: Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome.
  • BA000012: Mesorhizobium loti MAFF303099 DNA, complete genome.
  • AP003017: Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome.
  • AP003017: Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Phyllobacteriaceae; Mesorhizobium. ]

Methanocaldococcus jannaschii DSM 2661

The database was generated from the following GenBank entries:

  • MII1CG: Methanocaldococcus jannaschii DSM 2661 small extra-chromosomal
  • MII2CG: Methanocaldococcus jannaschii DSM 2661 large extra-chromosomal
  • MII2CG: Methanocaldococcus jannaschii DSM 2661 large extra-chromosomal
  • MII1CG: Methanocaldococcus jannaschii DSM 2661 small extra-chromosomal
  • L77117: Methanocaldococcus jannaschii DSM 2661, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanococci; Methanococcales;Methanocaldococcaceae; Methanocaldococcus. ]

Methanococcoides burtonii DSM 6242

The database was generated from the following GenBank entries:

  • CP000300: Methanococcoides burtonii DSM 6242, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;Methanosarcinaceae; Methanococcoides. ]

Methanococcus maripaludis S2

The database was generated from the following GenBank entries:

  • BX950229: Methanococcus maripaludis strain S2, complete sequence.
  • MMU47023: Methanococcus maripaludis plasmid pURB500, complete genome.
  • MMU47023: Methanococcus maripaludis plasmid pURB500, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanococci; Methanococcales;Methanococcaceae; Methanococcus. ]

Methanopyrus kandleri AV19

The database was generated from the following GenBank entries:

  • AE009439: Methanopyrus kandleri AV19, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanopyri; Methanopyrales;Methanopyraceae; Methanopyrus. ]

Methanosarcina acetivorans C2A

The database was generated from the following GenBank entries:

  • AE010299: Methanosarcina acetivorans str. C2A, complete genome.
  • MAU78295: Methanosarcina acetivorans plasmid pC2A, complete sequence.
  • MAU78295: Methanosarcina acetivorans plasmid pC2A, complete sequence.
[Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;Methanosarcinaceae; Methanosarcina. ]

Methanosarcina barkeri str. fusaro

The database was generated from the following GenBank entries:

  • CP000099: Methanosarcina barkeri str. fusaro chromosome 1, complete sequence.
  • CP000098: Methanosarcina barkeri str. fusaro plasmid 1, complete sequence.
[Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;Methanosarcinaceae; Methanosarcina. ]

Methanosarcina mazei Go1

The database was generated from the following GenBank entries:

  • AE008384: Methanosarcina mazei strain Goe1, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;Methanosarcinaceae; Methanosarcina. ]

Methanosphaera stadtmanae DSM 3091

The database was generated from the following GenBank entries:

  • CP000102: Methanosphaera stadtmanae DSM 3091, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;Methanobacteriaceae; Methanosphaera. ]

Methanospirillum hungatei JF-1

The database was generated from the following GenBank entries:

  • CP000254: Methanospirillum hungatei JF-1, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;Methanospirillaceae; Methanospirillum. ]

Methanothermobacter thermautotrophicus str. Delta H

The database was generated from the following GenBank entries:

  • AE000666: Methanothermobacter thermautotrophicus str. Delta H, complete
  • MTPFZ1A: M.thermoformicicum complete plasmid pFZ1 DNA.
  • MTPFV1A: M.thermoformicicum complete plasmid pFV1 DNA.
  • PPPMEC: Methanobacterium thermoautotrophicum plasmid pME2001 DNA.
  • AF145236: Methanobacterium thermoautotrophicum strain ZH3 plasmid pME2200,
  • MTPFZ1A: M.thermoformicicum complete plasmid pFZ1 DNA.
  • MTPFV1A: M.thermoformicicum complete plasmid pFV1 DNA.
  • AF145236: Methanobacterium thermoautotrophicum strain ZH3 plasmid pME2200,
  • MTPFV1A: M.thermoformicicum complete plasmid pFV1 DNA.
  • PPPMEC: Methanobacterium thermoautotrophicum plasmid pME2001 DNA.
[Taxonomy: Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;Methanobacteriaceae; Methanothermobacter. ]

Methylobacillus flagellatus KT

The database was generated from the following GenBank entries:

  • CP000284: Methylobacillus flagellatus KT, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales;Methylophilaceae; Methylobacillus. ]

Methylococcus capsulatus str. Bath

The database was generated from the following GenBank entries:

  • AE017282: Methylococcus capsulatus str. Bath, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;Methylococcaceae; Methylococcus. ]

Moorella thermoacetica ATCC 39073

The database was generated from the following GenBank entries:

  • CP000232: Moorella thermoacetica ATCC 39073, complete genome.
[Taxonomy: Bacteria; Firmicutes; Clostridia; Thermoanaerobacteriales;Thermoanaerobacteriaceae; Moorella group; Moorella. ]

Mycobacterium avium subsp. paratuberculosis K-10

The database was generated from the following GenBank entries:

  • AE016958: Mycobacterium avium subsp. paratuberculosis str. k10, complete
  • AY056023: Mycobacterium avium plasmid pVT2, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacteriumavium complex (MAC). ]

Mycobacterium bovis AF2122/97

The database was generated from the following GenBank entries:

  • BX248333: Mycobacterium bovis subsp. bovis AF2122/97 complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacteriumtuberculosis complex. ]

Mycobacterium leprae TN

The database was generated from the following GenBank entries:

  • AL450380: Mycobacterium leprae TN, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium. ]

Mycobacterium sp. MCS

The database was generated from the following GenBank entries:

  • CP000384: Mycobacterium sp. MCS, complete genome.
  • CP000385: Mycobacterium sp. MCS Plasmid1, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium. ]

Mycobacterium tuberculosis CDC1551

The database was generated from the following GenBank entries:

  • AE000516: Mycobacterium tuberculosis CDC1551, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacteriumtuberculosis complex. ]

Mycobacterium tuberculosis H37Rv

The database was generated from the following GenBank entries:

  • AL123456: Mycobacterium tuberculosis H37Rv complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacteriumtuberculosis complex. ]

Mycoplasma capricolum subsp. capricolum ATCC 27343

The database was generated from the following GenBank entries:

  • CP000123: Mycoplasma capricolum subsp. capricolum ATCC 27343, complete
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma gallisepticum R

The database was generated from the following GenBank entries:

  • AE015450: Mycoplasma gallisepticum strain R complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma genitalium G37

The database was generated from the following GenBank entries:

  • L43967: Mycoplasma genitalium G37, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma hyopneumoniae 232

The database was generated from the following GenBank entries:

  • AE017332: Mycoplasma hyopneumoniae 232, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma hyopneumoniae 7448

The database was generated from the following GenBank entries:

  • AE017244: Mycoplasma hyopneumoniae 7448, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma hyopneumoniae J

The database was generated from the following GenBank entries:

  • AE017243: Mycoplasma hyopneumoniae J, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma mobile 163K

The database was generated from the following GenBank entries:

  • AE017308: Mycoplasma mobile 163K complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma mycoides subsp. mycoides SC str. PG1

The database was generated from the following GenBank entries:

  • BX293980: Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma penetrans HF-2

The database was generated from the following GenBank entries:

  • BA000026: Mycoplasma penetrans HF-2 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma pneumoniae M129

The database was generated from the following GenBank entries:

  • U00089: Mycoplasma pneumoniae M129, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma pulmonis UAB CTIP

The database was generated from the following GenBank entries:

  • AL445566: Mycoplasma pulmonis UAB CTIP, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Mycoplasma synoviae 53

The database was generated from the following GenBank entries:

  • AE017245: Mycoplasma synoviae 53, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma. ]

Myxococcus xanthus DK 1622

The database was generated from the following GenBank entries:

  • CP000113: Myxococcus xanthus DK 1622, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;Cystobacterineae; Myxococcaceae; Myxococcus. ]

Nanoarchaeum equitans Kin4-M

The database was generated from the following GenBank entries:

  • AE017199: Nanoarchaeum equitans Kin4-M, complete genome.
[Taxonomy: Archaea; Nanoarchaeota; Nanoarchaeum. ]

Natronomonas pharaonis DSM 2160

The database was generated from the following GenBank entries:

  • CR936257: Natronomonas pharaonis DSM 2160 complete genome.
  • CR936258: Natronomonas pharaonis DSM 2160 plasmid PL131 complete genome.
  • CR936259: Natronomonas pharaonis DSM 2160 plasmid PL23 complete genome.
[Taxonomy: Archaea; Euryarchaeota; Halobacteria; Halobacteriales;Halobacteriaceae; Natronomonas. ]

Neisseria gonorrhoeae FA 1090

The database was generated from the following GenBank entries:

  • AE004969: Neisseria gonorrhoeae FA 1090, complete genome.
  • NGU20374: Neisseria gonorrhoeae plasmid pJD4, complete sequence.
  • NGU20374: Neisseria gonorrhoeae plasmid pJD4, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales;Neisseriaceae; Neisseria. ]

Neisseria meningitidis MC58

The database was generated from the following GenBank entries:

  • AE002098: Neisseria meningitidis MC58, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales;Neisseriaceae; Neisseria. ]

Neisseria meningitidis Z2491

The database was generated from the following GenBank entries:

  • AL157959: Neisseria meningitidis serogroup A strain Z2491 complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales;Neisseriaceae; Neisseria. ]

Neorickettsia sennetsu str. Miyayama

The database was generated from the following GenBank entries:

  • CP000237: Neorickettsia sennetsu strain Miyayama, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Anaplasmataceae; Neorickettsia. ]

Nitrobacter hamburgensis X14

The database was generated from the following GenBank entries:

  • CP000319: Nitrobacter hamburgensis X14, complete genome.
  • CP000320: Nitrobacter hamburgensis X14 plasmid 1, complete sequence.
  • CP000321: Nitrobacter hamburgensis X14 plasmid 2, complete sequence.
  • CP000322: Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Nitrobacter. ]

Nitrobacter winogradskyi Nb-255

The database was generated from the following GenBank entries:

  • CP000115: Nitrobacter winogradskyi Nb-255, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Nitrobacter. ]

Nitrosococcus oceani ATCC 19707

The database was generated from the following GenBank entries:

  • CP000127: Nitrosococcus oceani ATCC 19707, complete genome.
  • CP000126: Nitrosococcus oceani ATCC 19707 plasmid A, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;Chromatiaceae; Nitrosococcus. ]

Nitrosomonas europaea ATCC 19718

The database was generated from the following GenBank entries:

  • AL954747: Nitrosomonas europaea ATCC 19718, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;Nitrosomonadaceae; Nitrosomonas. ]

Nitrosospira multiformis ATCC 25196

The database was generated from the following GenBank entries:

  • CP000103: Nitrosospira multiformis ATCC 25196, complete genome.
  • CP000104: Nitrosospira multiformis ATCC 25196 plasmid 1, complete sequence.
  • CP000105: Nitrosospira multiformis ATCC 25196 plasmid 2, complete sequence.
  • CP000106: Nitrosospira multiformis ATCC 25196 plasmid 3, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;Nitrosomonadaceae; Nitrosospira. ]

Nocardia farcinica IFM 10152

The database was generated from the following GenBank entries:

  • AP006618: Nocardia farcinica IFM 10152 DNA, complete genome.
  • AP006619: Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Corynebacterineae; Nocardiaceae; Nocardia. ]

Nostoc sp. PCC 7120 (Anabaena sp. PCC 7120)

The database was generated from the following GenBank entries:

  • BA000019: Nostoc sp. PCC 7120 DNA, complete genome.
  • BA000020: Nostoc sp. PCC 7120 plasmid pCC7120alpha DNA, complete genome.
  • AP003602: Nostoc sp. PCC 7120 plasmid pCC7120beta DNA, complete sequence.
  • AP003606: Nostoc sp. PCC 7120 plasmid pCC7120zeta DNA, complete sequence.
  • AP003603: Nostoc sp. PCC 7120 plasmid pCC7120gamma DNA, complete sequence.
  • AP003604: Nostoc sp. PCC 7120 plasmid pCC7120delta DNA, complete sequence.
  • AP003606: Nostoc sp. PCC 7120 plasmid pCC7120zeta DNA, complete sequence.
  • AP003605: Nostoc sp. PCC 7120 plasmid pCC7120epsilon DNA, complete sequence.
  • AP003604: Nostoc sp. PCC 7120 plasmid pCC7120delta DNA, complete sequence.
  • AP003603: Nostoc sp. PCC 7120 plasmid pCC7120gamma DNA, complete sequence.
  • AP003602: Nostoc sp. PCC 7120 plasmid pCC7120beta DNA, complete sequence.
  • AP003605: Nostoc sp. PCC 7120 plasmid pCC7120epsilon DNA, complete sequence.
[Taxonomy: Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc. ]

Novosphingobium aromaticivorans DSM 12444

The database was generated from the following GenBank entries:

  • CP000248: Novosphingobium aromaticivorans DSM 12444, complete genome.
  • AF079317: Sphingomonas aromaticivorans plasmid pNL1, complete plasmid
  • AF079317: Sphingomonas aromaticivorans plasmid pNL1, complete plasmid
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;Sphingomonadaceae; Novosphingobium. ]

Oceanobacillus iheyensis HTE831

The database was generated from the following GenBank entries:

  • BA000028: Oceanobacillus iheyensis HTE831 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Bacillaceae; Oceanobacillus. ]

Onion yellows phytoplasma OY-M

The database was generated from the following GenBank entries:

  • AP006628: Onion yellows phytoplasma OY-M DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Acholeplasmatales;Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasmaasteris. ]

Parachlamydia sp. UWE25

The database was generated from the following GenBank entries:

  • BX908798: Parachlamydia-related symbiont UWE25, complete genome.
[Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae;Parachlamydia. ]

Pasteurella multocida subsp. multocida str. Pm70

The database was generated from the following GenBank entries:

  • AE004439: Pasteurella multocida subsp. multocida str. Pm70, complete genome.
  • PMU57647: Pasteurella multocida plasmid pIG1, complete sequence.
  • PMU57647: Pasteurella multocida plasmid pIG1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;Pasteurellaceae; Pasteurella. ]

Pelobacter carbinolicus DSM 2380

The database was generated from the following GenBank entries:

  • CP000142: Pelobacter carbinolicus DSM 2380, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;Pelobacteraceae; Pelobacter. ]

Pelodictyon luteolum DSM 273

The database was generated from the following GenBank entries:

  • CP000096: Pelodictyon luteolum DSM 273, complete genome.
[Taxonomy: Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;Chlorobium/Pelodictyon group; Pelodictyon. ]

Photobacterium profundum SS9

The database was generated from the following GenBank entries:

  • CR354531: Photobacterium profundum SS9.
  • CR354532: Photobacterium profundum SS9 chromosome 2.
  • CR377818: Photobacterium profundum SS9 plasmid 1.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Photobacterium. ]

Photorhabdus luminescens subsp. laumondii TTO1

The database was generated from the following GenBank entries:

  • BX470251: Photorhabdus luminescens subsp. laumondii TTO1 complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Photorhabdus. ]

Picrophilus torridus DSM 9790

The database was generated from the following GenBank entries:

  • AE017261: Picrophilus torridus DSM 9790, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales;Picrophilaceae; Picrophilus. ]

Polaromonas sp. JS666

The database was generated from the following GenBank entries:

  • CP000316: Polaromonas sp. JS666, complete genome.
  • CP000317: Polaromonas sp. JS666 plasmid 1, complete sequence.
  • CP000318: Polaromonas sp. JS666 plasmid 2, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Comamonadaceae; Polaromonas. ]

Porphyromonas gingivalis W83

The database was generated from the following GenBank entries:

  • AE015924: Porphyromonas gingivalis W83, complete genome.
[Taxonomy: Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;Porphyromonadaceae; Porphyromonas. ]

Prochlorococcus marinus str. MIT 9312

The database was generated from the following GenBank entries:

  • CP000111: Prochlorococcus marinus str. MIT 9312, complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;Prochlorococcus. ]

Prochlorococcus marinus str. MIT 9313

The database was generated from the following GenBank entries:

  • BX548175: Prochlorococcus marinus MIT9313 complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;Prochlorococcus. ]

Prochlorococcus marinus str. NATL2A

The database was generated from the following GenBank entries:

  • CP000095: Prochlorococcus marinus str. NATL2A, complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;Prochlorococcus. ]

Prochlorococcus marinus subsp. marinus str. CCMP1375

The database was generated from the following GenBank entries:

  • AE017126: Prochlorococcus marinus subsp. marinus str. CCMP1375 complete
[Taxonomy: Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;Prochlorococcus. ]

Prochlorococcus marinus subsp. pastoris str. CCMP1986

The database was generated from the following GenBank entries:

  • BX548174: Prochlorococcus marinus MED4 complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;Prochlorococcus. ]

Propionibacterium acnes KPA171202

The database was generated from the following GenBank entries:

  • AE017283: Propionibacterium acnes KPA171202, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Propionibacterineae; Propionibacteriaceae; Propionibacterium. ]

Pseudoalteromonas haloplanktis TAC125

The database was generated from the following GenBank entries:

  • CR954246: Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
  • CR954247: Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Pseudoalteromonadaceae; Pseudoalteromonas. ]

Pseudomonas aeruginosa PAO1

The database was generated from the following GenBank entries:

  • AE004091: Pseudomonas aeruginosa PAO1, complete genome.
  • AY257538: Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence.
  • AY257539: Pseudomonas aeruginosa strain C plasmid pKLC102 transposon TNCP23,
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas entomophila L48

The database was generated from the following GenBank entries:

  • CT573326: Pseudomonas entomophila str. L48 chromosome,complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas fluorescens Pf-5

The database was generated from the following GenBank entries:

  • CP000076: Pseudomonas fluorescens Pf-5, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas fluorescens PfO-1

The database was generated from the following GenBank entries:

  • CP000094: Pseudomonas fluorescens PfO-1, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas putida

The database was generated from the following GenBank entries:

  • PPAC002061: Pseudomonas putida Plasmid php11, complete sequence.
  • PPU344068: Pseudomonas putida plasmid pWW0 complete genome.
  • PPU289784: Pseudomonas putida plasmid pPP81 repA gene, ORFB, ORFC and ORFD.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas putida KT2440

The database was generated from the following GenBank entries:

  • AE015451: Pseudomonas putida KT2440 complete genome.
  • PPU344068: Pseudomonas putida plasmid pWW0 complete genome.
  • PPU289784: Pseudomonas putida plasmid pPP81 repA gene, ORFB, ORFC and ORFD.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas syringae pv. phaseolicola 1448A

The database was generated from the following GenBank entries:

  • CP000058: Pseudomonas syringae pv. phaseolicola 1448A, complete genome.
  • CP000059: Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete
  • CP000060: Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas syringae pv. syringae B728a

The database was generated from the following GenBank entries:

  • CP000075: Pseudomonas syringae pv. syringae B728a, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Pseudomonas syringae pv. tomato str. DC3000

The database was generated from the following GenBank entries:

  • AE016853: Pseudomonas syringae pv. tomato str. DC3000 complete genome.
  • AE016854: Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,
  • AE016855: Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A,
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Pseudomonadaceae; Pseudomonas. ]

Psychrobacter arcticus 273-4

The database was generated from the following GenBank entries:

  • CP000082: Psychrobacter arcticus 273-4, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Moraxellaceae; Psychrobacter. ]

Psychrobacter cryohalolentis K5

The database was generated from the following GenBank entries:

  • CP000323: Psychrobacter cryohalolentis K5, complete genome.
  • CP000324: Psychrobacter cryohalolentis K5 plasmid 1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;Moraxellaceae; Psychrobacter. ]

Pyrobaculum aerophilum str. IM2

The database was generated from the following GenBank entries:

  • AE009441: Pyrobaculum aerophilum strain IM2 complete genome.
[Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Thermoproteales;Thermoproteaceae; Pyrobaculum. ]

Pyrococcus abyssi GE5

The database was generated from the following GenBank entries:

  • AL096836: Pyrococcus abyssi complete genome.
  • U49503: Pyrococcus abyssi GE5 plasmid pGT5, complete sequence.
[Taxonomy: Archaea; Euryarchaeota; Thermococci; Thermococcales;Thermococcaceae; Pyrococcus. ]

Pyrococcus furiosus DSM 3638

The database was generated from the following GenBank entries:

  • AE009950: Pyrococcus furiosus DSM 3638, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermococci; Thermococcales;Thermococcaceae; Pyrococcus. ]

Pyrococcus horikoshii OT3

The database was generated from the following GenBank entries:

  • BA000001: Pyrococcus horikoshii OT3 DNA, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermococci; Thermococcales;Thermococcaceae; Pyrococcus. ]

Ralstonia eutropha JMP134

The database was generated from the following GenBank entries:

  • CP000090: Ralstonia eutropha JMP134 chromosome 1, complete sequence.
  • CP000091: Ralstonia eutropha JMP134 chromosome 2, complete sequence.
  • CP000092: Ralstonia eutropha JMP134 megaplasmid, complete sequence.
  • CP000093: Ralstonia eutropha JMP134 plasmid 1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Cupriavidus. ]

Ralstonia metallidurans CH34

The database was generated from the following GenBank entries:

  • CP000352: Ralstonia metallidurans CH34, complete genome.
  • CP000353: Ralstonia metallidurans CH34 megaplasmid, complete sequence.
  • CP000354: Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence.
  • CP000355: Ralstonia metallidurans CH34 plasmid pMOL28, complete sequence.
  • AECZCOP5R: Ralstonia metallidurans CH34 plasmid pMOL30.
  • AEPARREPG: Ralstonia metallidurans CH34 plasmid pMOL28.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Cupriavidus. ]

Ralstonia solanacearum

The database was generated from the following GenBank entries:

  • AL646052: Ralstonia solanacearum GMI1000 chromosome complete sequence.
  • AL646053: Ralstonia solanacearum GMI1000 megaplasmid complete sequence.
  • AB015669: Ralstonia solanacearum plasmid pJTPS1 DNA, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Burkholderiaceae; Ralstonia. ]

Rhizobium etli CFN 42

The database was generated from the following GenBank entries:

  • CP000133: Rhizobium etli CFN 42, complete genome.
  • CP000134: Rhizobium etli CFN 42 plasmid p42a, complete sequence.
  • CP000135: Rhizobium etli CFN 42 plasmid p42b, complete sequence.
  • CP000136: Rhizobium etli CFN 42 plasmid p42c, complete sequence.
  • CP000137: Rhizobium etli CFN 42 plasmid p42e, complete sequence.
  • CP000138: Rhizobium etli CFN 42 plasmid p42f, complete sequence.
  • REU80928: Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. ]

Rhodobacter sphaeroides 2.4.1

The database was generated from the following GenBank entries:

  • CP000143: Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome.
  • CP000144: Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome.
  • CP000143: Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome.
  • CP000144: Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome.
  • CP000145: Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence.
  • CP000146: Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence.
  • CP000147: Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence.
  • CP000145: Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence.
  • CP000146: Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence.
  • CP000147: Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;Rhodobacteraceae; Rhodobacter. ]

Rhodoferax ferrireducens T118

The database was generated from the following GenBank entries:

  • CP000267: Rhodoferax ferrireducens DSM 15236, complete genome.
  • CP000268: Rhodoferax ferrireducens DSM 15236 plasmid1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;Comamonadaceae; Rhodoferax. ]

Rhodopirellula baltica SH 1

The database was generated from the following GenBank entries:

  • BX119912: Pirellula sp. strain 1 complete genome.
[Taxonomy: Bacteria; Planctomycetes; Planctomycetacia; Planctomycetales;Planctomycetaceae; Rhodopirellula. ]

Rhodopseudomonas palustris BisB18

The database was generated from the following GenBank entries:

  • CP000301: Rhodopseudomonas palustris BisB18, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Rhodopseudomonas. ]

Rhodopseudomonas palustris BisB5

The database was generated from the following GenBank entries:

  • CP000283: Rhodopseudomonas palustris BisB5, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Rhodopseudomonas. ]

Rhodopseudomonas palustris CGA009

The database was generated from the following GenBank entries:

  • BX571963: Rhodopseudomonas palustris CGA009 complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Rhodopseudomonas. ]

Rhodopseudomonas palustris HaA2

The database was generated from the following GenBank entries:

  • CP000250: Rhodopseudomonas palustris HaA2, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Bradyrhizobiaceae; Rhodopseudomonas. ]

Rhodospirillum rubrum ATCC 11170

The database was generated from the following GenBank entries:

  • CP000230: Rhodospirillum rubrum ATCC 11170, complete genome.
  • CP000231: Rhodospirillum rubrum ATCC 11170 plasmid, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;Rhodospirillaceae; Rhodospirillum. ]

Rickettsia bellii RML369-C

The database was generated from the following GenBank entries:

  • CP000087: Rickettsia bellii RML369-C, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Rickettsieae; Rickettsia. ]

Rickettsia conorii str. Malish 7

The database was generated from the following GenBank entries:

  • AE006914: Rickettsia conorii str. Malish 7, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. ]

Rickettsia felis URRWXCal2

The database was generated from the following GenBank entries:

  • CP000053: Rickettsia felis URRWXCal2, complete genome.
  • CP000054: Rickettsia felis URRWXCal2 plasmid pRF, complete sequence.
  • CP000055: Rickettsia felis URRWXCal2 plasmid pRFdelta, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. ]

Rickettsia prowazekii str. Madrid E

The database was generated from the following GenBank entries:

  • AJ235269: Rickettsia prowazekii str. Madrid E, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. ]

Rickettsia typhi str. Wilmington

The database was generated from the following GenBank entries:

  • AE017197: Rickettsia typhi str. Wilmington complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. ]

Rubrobacter xylanophilus DSM 9941

The database was generated from the following GenBank entries:

  • CP000386: Rubrobacter xylanophilus DSM 9941, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Rubrobacteridae; Rubrobacterales;Rubrobacterineae; Rubrobacteraceae; Rubrobacter. ]

Saccharophagus degradans 2-40

The database was generated from the following GenBank entries:

  • CP000282: Saccharophagus degradans 2-40, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Alteromonadaceae; Saccharophagus. ]

Salinibacter ruber DSM 13855

The database was generated from the following GenBank entries:

  • CP000159: Salinibacter ruber DSM 13855, complete genome.
  • CP000160: Salinibacter ruber DSM 13855 plasmid pSR35, complete genome.
[Taxonomy: Bacteria; Bacteroidetes; Sphingobacteria; Sphingobacteriales;Crenotrichaceae; Salinibacter. ]

Salmonella enterica subsp. enterica serovar Choleraesuis

The database was generated from the following GenBank entries:

  • AB076707: Salmonella enterica subsp. enterica serovar Choleraesuis cryptic
  • AB040415: Salmonella enterica serovar Choleraesuis 50k virulence plasmid DNA,
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Salmonella. ]

Salmonella enterica subsp. enterica serovar Typhi Ty2

The database was generated from the following GenBank entries:

  • AE014613: Salmonella enterica subsp. enterica serovar Typhi Ty2, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Salmonella. ]

Salmonella enterica subsp. enterica serovar Typhi str. CT18

The database was generated from the following GenBank entries:

  • AL513382: Salmonella enterica subsp. enterica serovar Typhi str. CT18,
  • STYPPHCM1: Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid
  • STYPPHCM2: Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid
  • STYPPHCM1: Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid
  • STYPPHCM2: Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Salmonella; Salmonella enterica subsp. entericaserovar Typhi. ]

Salmonella typhimurium LT2

The database was generated from the following GenBank entries:

  • AE006468: Salmonella typhimurium LT2, complete genome.
  • AE006471: Salmonella typhimurium LT2 strain SGSC1412 plasmid pSLT complete
  • AE006471: Salmonella typhimurium LT2 strain SGSC1412 plasmid pSLT complete
  • AE006471: Salmonella typhimurium LT2 strain SGSC1412 plasmid pSLT complete
  • STPSC101: Salmonella low copy number plasmid pSC101.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Salmonella. ]

Shewanella denitrificans OS217

The database was generated from the following GenBank entries:

  • CP000302: Shewanella denitrificans OS217, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Shewanellaceae; Shewanella. ]

Shewanella oneidensis MR-1

The database was generated from the following GenBank entries:

  • AE014299: Shewanella oneidensis MR-1, complete genome.
  • AE014300: Shewanella oneidensis MR-1 megaplasmid, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;Shewanellaceae; Shewanella. ]

Shigella boydii Sb227

The database was generated from the following GenBank entries:

  • CP000036: Shigella boydii Sb227, complete genome.
  • CP000037: Shigella boydii Sb227 plasmid pSB4_227, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Shigella. ]

Shigella dysenteriae Sd197

The database was generated from the following GenBank entries:

  • CP000034: Shigella dysenteriae Sd197, complete genome.
  • CP000035: Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Shigella. ]

Shigella flexneri 2a str. 2457T

The database was generated from the following GenBank entries:

  • AE014073: Shigella flexneri 2a str. 2457T, complete genome.
  • AF348706: Shigella flexneri large virulence plasmid pWR501, complete plasmid
  • AF348706: Shigella flexneri large virulence plasmid pWR501, complete plasmid
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Shigella. ]

Shigella flexneri 2a str. 301

The database was generated from the following GenBank entries:

  • AE005674: Shigella flexneri 2a str. 301, complete genome.
  • AF386526: Shigella flexneri 2a str. 301 virulence plasmid pCP301, complete
  • AF348706: Shigella flexneri large virulence plasmid pWR501, complete plasmid
  • AF348706: Shigella flexneri large virulence plasmid pWR501, complete plasmid
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Shigella. ]

Shigella sonnei Ss046

The database was generated from the following GenBank entries:

  • CP000038: Shigella sonnei Ss046, complete genome.
  • CP000039: Shigella sonnei Ss046 plasmid pSS_046, complete sequence.
  • AF497970: Shigella sonnei plasmid pKKTET7, complete sequence.
  • AF282884: Shigella sonnei plasmid ColJs, complete sequence.
  • AF282884: Shigella sonnei plasmid ColJs, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Shigella. ]

Silicibacter pomeroyi DSS-3

The database was generated from the following GenBank entries:

  • CP000031: Silicibacter pomeroyi DSS-3, complete genome.
  • CP000032: Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;Rhodobacteraceae; Silicibacter. ]

Silicibacter sp. TM1040

The database was generated from the following GenBank entries:

  • CP000377: Silicibacter sp. TM1040, complete genome.
  • CP000376: Silicibacter sp. TM1040 mega plasmid, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;Rhodobacteraceae; Silicibacter. ]

Sinorhizobium meliloti 1021

The database was generated from the following GenBank entries:

  • AL591688: Sinorhizobium meliloti 1021 complete chromosome.
  • RME591985: Sinorhizobium meliloti 1021 complete pSymB.
  • RME591985: Sinorhizobium meliloti 1021 complete pSymB.
  • AE006469: Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. ]

Sodalis glossinidius str. 'morsitans'

The database was generated from the following GenBank entries:

  • AP008232: Sodalis glossinidius str. 'morsitans' DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Sodalis. ]

Sphingopyxis alaskensis RB2256

The database was generated from the following GenBank entries:

  • CP000356: Sphingopyxis alaskensis RB2256, complete genome.
  • CP000357: Sphingopyxis alaskensis RB2256 F plasmid, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;Sphingomonadaceae; Sphingopyxis. ]

Staphylococcus aureus RF122

The database was generated from the following GenBank entries:

  • AJ938182: Staphylococcus aureus RF122 complete genome.
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus COL

The database was generated from the following GenBank entries:

  • CP000046: Staphylococcus aureus subsp. aureus COL, complete genome.
  • CP000045: Staphylococcus aureus subsp. aureus COL plasmid pT181, complete
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus MRSA252

The database was generated from the following GenBank entries:

  • BX571856: Staphylococcus aureus subsp. aureus strain MRSA252, complete
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus MSSA476

The database was generated from the following GenBank entries:

  • BX571857: Staphylococcus aureus strain MSSA476, complete genome.
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus MW2

The database was generated from the following GenBank entries:

  • BA000033: Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus Mu50

The database was generated from the following GenBank entries:

  • BA000017: Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome.
  • AP003367: Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp DNA,
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus N315

The database was generated from the following GenBank entries:

  • BA000018: Staphylococcus aureus subsp. aureus N315 genomic DNA, complete
  • AP003139: Staphylococcus aureus subsp. aureus N315 plasmid pN315B DNA,
  • AP003139: Staphylococcus aureus subsp. aureus N315 plasmid pN315B DNA,
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus NCTC 8325

The database was generated from the following GenBank entries:

  • CP000253: Staphylococcus aureus subsp. aureus NCTC 8325, complete genome.
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus aureus subsp. aureus USA300

The database was generated from the following GenBank entries:

  • CP000255: Staphylococcus aureus subsp. aureus USA300, complete genome.
  • CP000256: Staphylococcus aureus subsp. aureus USA300 plasmid pUSA01, complete
  • CP000257: Staphylococcus aureus subsp. aureus USA300 plasmid pUSA02, complete
  • CP000258: Staphylococcus aureus subsp. aureus USA300 plasmid pUSA03, complete
  • SAU38429: Staphylococcus aureus chloramphenicol resistance plasmid pKH7,
  • SAU38428: Staphylococcus aureus tetracycline resistance plasmid pKH6,
  • SAPC221: Staphylococcus aureus plasmid pC221 complete DNA sequence.
  • AF051917: Staphylococcus aureus plasmid pSK41, complete sequence.
  • SAU36910: Staphylococcus aureus plasmid J3358, partial sequence.
  • SAU96609: Staphylococcus aureus plasmid pSK3, complete genome.
  • SAU96610: Staphylococcus aureus plasmid pSK6, complete genome.
  • SAC194: Staphylococcus aureus plasmid pC194. Includes gene for
  • SAU36911: Staphylococcus aureus plasmid J3356::POX7;1, complete sequence.
  • SAU36912: Staphylococcus aureus plasmid J3356::POX7;3, complete sequence.
  • SAU512814: Staphylococcus aureus pNVH01 plasmid.
  • AF151117: Staphylococcus aureus plasmid pKH3, complete sequence.
  • AP003088: Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus epidermidis ATCC 12228

The database was generated from the following GenBank entries:

  • AE015929: Staphylococcus epidermidis ATCC 12228, complete genome.
  • AY092027: Staphylococcus epidermidis CH plasmid pSepCH, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus epidermidis RP62A

The database was generated from the following GenBank entries:

  • CP000029: Staphylococcus epidermidis RP62A, complete genome.
  • CP000028: Staphylococcus epidermidis RP62A plasmid pSERP, complete sequence.
  • AY092027: Staphylococcus epidermidis CH plasmid pSepCH, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus haemolyticus

The database was generated from the following GenBank entries:

  • SHA400722: Staphylococcus haemolyticus blaZ gene, blaR gene, blaI gene, binR
  • SHA400722: Staphylococcus haemolyticus blaZ gene, blaR gene, blaI gene, binR
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus haemolyticus JCSC1435

The database was generated from the following GenBank entries:

  • AP006716: Staphylococcus haemolyticus JCSC1435 DNA, complete genome.
  • AP006717: Staphylococcus haemolyticus JCSC1435 plasmid pSHaeA DNA, complete
  • AP006718: Staphylococcus haemolyticus JCSC1435 plasmid pSHaeB DNA, complete
  • AP006719: Staphylococcus haemolyticus JCSC1435 plasmid pSHaeC DNA, complete
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

The database was generated from the following GenBank entries:

  • AP008934: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
  • AP008935: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
  • AP008936: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
[Taxonomy: Bacteria; Firmicutes; Bacillales; Staphylococcus. ]

Streptococcus agalactiae 2603V/R

The database was generated from the following GenBank entries:

  • AE009948: Streptococcus agalactiae 2603V/R complete genome.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
  • SAU83488: Streptococcus agalactiae plasmid pGB354, complete plasmid sequence.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus agalactiae A909

The database was generated from the following GenBank entries:

  • CP000114: Streptococcus agalactiae A909, complete genome.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
  • SAU83488: Streptococcus agalactiae plasmid pGB354, complete plasmid sequence.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus agalactiae NEM316

The database was generated from the following GenBank entries:

  • AL732656: Streptococcus agalactiae NEM316 complete genome.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
  • SAU83488: Streptococcus agalactiae plasmid pGB354, complete plasmid sequence.
  • AACOP: S.agalactiae plasmid pIP501 copR, repR amd ML5-R genes.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus mutans UA159

The database was generated from the following GenBank entries:

  • AE014133: Streptococcus mutans UA159, complete genome.
  • AF068250: Streptococcus mutans strain UA140 plasmid pUA140, complete
  • AF050494: Streptococcus mutans strain LM7 plasmid pLM7, complete plasmid
  • AF068250: Streptococcus mutans strain UA140 plasmid pUA140, complete
  • AF050494: Streptococcus mutans strain LM7 plasmid pLM7, complete plasmid
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pneumoniae R6

The database was generated from the following GenBank entries:

  • AE007317: Streptococcus pneumoniae R6, complete genome.
  • AF047385: Streptococcus pneumoniae plasmid pSMB1, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pneumoniae TIGR4

The database was generated from the following GenBank entries:

  • AE005672: Streptococcus pneumoniae TIGR4, complete genome.
  • AF047385: Streptococcus pneumoniae plasmid pSMB1, complete sequence.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes M1 GAS

The database was generated from the following GenBank entries:

  • AE004092: Streptococcus pyogenes M1 GAS, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS10270

The database was generated from the following GenBank entries:

  • CP000260: Streptococcus pyogenes MGAS10270, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS10394

The database was generated from the following GenBank entries:

  • CP000003: Streptococcus pyogenes MGAS10394, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS10750

The database was generated from the following GenBank entries:

  • CP000262: Streptococcus pyogenes MGAS10750, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS2096

The database was generated from the following GenBank entries:

  • CP000261: Streptococcus pyogenes MGAS2096, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS315

The database was generated from the following GenBank entries:

  • AE014074: Streptococcus pyogenes MGAS315, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS5005

The database was generated from the following GenBank entries:

  • CP000017: Streptococcus pyogenes MGAS5005, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS6180

The database was generated from the following GenBank entries:

  • CP000056: Streptococcus pyogenes MGAS6180, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS8232

The database was generated from the following GenBank entries:

  • AE009949: Streptococcus pyogenes strain MGAS8232, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes MGAS9429

The database was generated from the following GenBank entries:

  • CP000259: Streptococcus pyogenes MGAS9429, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus pyogenes SSI-1

The database was generated from the following GenBank entries:

  • BA000034: Streptococcus pyogenes SSI-1 DNA, complete genome.
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus thermophilus CNRZ1066

The database was generated from the following GenBank entries:

  • CP000024: Streptococcus thermophilus CNRZ1066, complete genome.
  • AY033392: Streptococcus thermophilus plasmid pER13, complete sequence.
  • AF177167: Streptococcus thermophilus plasmid pER35, complete plasmid
  • AF177167: Streptococcus thermophilus plasmid pER35, complete plasmid
  • AF177168: Streptococcus thermophilus plasmid pER36, complete plasmid
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptococcus thermophilus LMG 18311

The database was generated from the following GenBank entries:

  • CP000023: Streptococcus thermophilus LMG 18311, complete genome.
  • AY033392: Streptococcus thermophilus plasmid pER13, complete sequence.
  • AF177167: Streptococcus thermophilus plasmid pER35, complete plasmid
  • AF177167: Streptococcus thermophilus plasmid pER35, complete plasmid
  • AF177168: Streptococcus thermophilus plasmid pER36, complete plasmid
[Taxonomy: Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;Streptococcus. ]

Streptomyces avermitilis MA-4680

The database was generated from the following GenBank entries:

  • BA000030: Streptomyces avermitilis MA-4680 genomic DNA, complete genome.
  • AP005645: Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Streptomycineae; Streptomycetaceae; Streptomyces. ]

Streptomyces coelicolor A3(2)

The database was generated from the following GenBank entries:

  • AL645882: Streptomyces coelicolor A3(2) complete genome.
  • AL589148: Streptomyces coelicolor plasmid SCP1.
  • SCSCP2: Streptomyces coelicolor A3(2) plasmid SCP2.
  • SCO414671: Streptomyces coelicolor plasmid 2 (SCP2*).
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Streptomycineae; Streptomycetaceae; Streptomyces. ]

Sulfolobus acidocaldarius DSM 639

The database was generated from the following GenBank entries:

  • CP000077: Sulfolobus acidocaldarius DSM 639, complete genome.
[Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;Sulfolobus. ]

Sulfolobus solfataricus P2

The database was generated from the following GenBank entries:

  • AE006641: Sulfolobus solfataricus P2, complete genome.
[Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;Sulfolobus. ]

Sulfolobus tokodaii str. 7

The database was generated from the following GenBank entries:

  • BA000023: Sulfolobus tokodaii str. 7 DNA, complete genome.
[Taxonomy: Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;Sulfolobus. ]

Symbiobacterium thermophilum IAM 14863

The database was generated from the following GenBank entries:

  • AP006840: Symbiobacterium thermophilum IAM 14863 DNA, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Symbiobacterium. ]

Synechococcus elongatus PCC 6301 (Synechococcus leopoliensis SAG

The database was generated from the following GenBank entries:

  • AP008231: Synechococcus elongatus PCC 6301 DNA, complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus elongatus PCC 7942

The database was generated from the following GenBank entries:

  • CP000100: Synechococcus elongatus PCC 7942, complete genome.
  • AF441790: Synechococcus sp. PCC 7942 plasmid pANL, complete sequence.
  • CP000101: Synechococcus elongatus PCC 7942 plasmid 1, complete sequence.
  • AF441790: Synechococcus sp. PCC 7942 plasmid pANL, complete sequence.
  • S89470: pmaA...repA [Synechococcus sp., PCC 7942, plasmid pUH24, Plasmid,
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus sp. CC9605

The database was generated from the following GenBank entries:

  • CP000110: Synechococcus sp. CC9605, complete genome.
  • AB018669: Synechococcus sp. (strain:MA4) plasmid pMA4 DNA, complete genome
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus sp. CC9902

The database was generated from the following GenBank entries:

  • CP000097: Synechococcus sp. CC9902, complete genome.
  • AB018669: Synechococcus sp. (strain:MA4) plasmid pMA4 DNA, complete genome
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus sp. JA-2-3B'a(2-13)

The database was generated from the following GenBank entries:

  • CP000240: Synechococcus sp. JA-2-3B'a(2-13), complete genome.
  • AB018669: Synechococcus sp. (strain:MA4) plasmid pMA4 DNA, complete genome
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus sp. JA-3-3Ab

The database was generated from the following GenBank entries:

  • CP000239: Synechococcus sp. JA-3-3Ab, complete genome.
  • AB018669: Synechococcus sp. (strain:MA4) plasmid pMA4 DNA, complete genome
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechococcus sp. WH 8102

The database was generated from the following GenBank entries:

  • BX548020: Synechococcus sp. WH8102 complete genome.
  • AB018669: Synechococcus sp. (strain:MA4) plasmid pMA4 DNA, complete genome
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechococcus. ]

Synechocystis sp. PCC 6803

The database was generated from the following GenBank entries:

  • BA000022: Synechocystis sp. PCC 6803 DNA, complete genome.
  • CB4PLASAAA: Synechocystis PCC6803 plasmid pCB2.4, complete sequence.
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Synechocystis. ]

Syntrophus aciditrophicus SB

The database was generated from the following GenBank entries:

  • CP000252: Syntrophus aciditrophicus SB, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales;Syntrophaceae; Syntrophus. ]

Thermoanaerobacter tengcongensis MB4

The database was generated from the following GenBank entries:

  • AE008691: Thermoanaerobacter tengcongensis strain MB4, complete genome.
[Taxonomy: Bacteria; Firmicutes; Clostridia; Thermoanaerobacteriales;Thermoanaerobacteriaceae; Thermoanaerobacter. ]

Thermobifida fusca YX

The database was generated from the following GenBank entries:

  • CP000088: Thermobifida fusca YX, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Streptosporangineae; Nocardiopsaceae; Thermobifida. ]

Thermococcus kodakarensis KOD1

The database was generated from the following GenBank entries:

  • AP006878: Thermococcus kodakarensis KOD1 DNA, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermococci; Thermococcales;Thermococcaceae; Thermococcus. ]

Thermoplasma acidophilum DSM 1728

The database was generated from the following GenBank entries:

  • AL139299: Thermoplasma acidophilum DSM 1728 complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales;Thermoplasmataceae; Thermoplasma. ]

Thermoplasma volcanium GSS1

The database was generated from the following GenBank entries:

  • BA000011: Thermoplasma volcanium GSS1 DNA, complete genome.
[Taxonomy: Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales;Thermoplasmataceae; Thermoplasma. ]

Thermosynechococcus elongatus BP-1

The database was generated from the following GenBank entries:

  • BA000039: Thermosynechococcus elongatus BP-1 DNA, complete genome.
[Taxonomy: Bacteria; Cyanobacteria; Chroococcales; Thermosynechococcus. ]

Thermotoga maritima MSB8

The database was generated from the following GenBank entries:

  • AE000512: Thermotoga maritima MSB8, complete genome.
[Taxonomy: Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga. ]

Thermus thermophilus HB27

The database was generated from the following GenBank entries:

  • AE017221: Thermus thermophilus HB27, complete genome.
  • AE017222: Thermus thermophilus HB27 plasmid pTT27, complete sequence.
[Taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae;Thermus. ]

Thermus thermophilus HB8

The database was generated from the following GenBank entries:

  • AP008226: Thermus thermophilus HB8 genomic DNA, complete genome.
  • AP008227: Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence.
  • AP008228: Thermus thermophilus HB8 plasmid pTT8 DNA, complete sequence.
[Taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae;Thermus. ]

Thiobacillus denitrificans ATCC 25259

The database was generated from the following GenBank entries:

  • CP000116: Thiobacillus denitrificans ATCC 25259, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales;Hydrogenophilaceae; Thiobacillus. ]

Thiomicrospira crunogena XCL-2

The database was generated from the following GenBank entries:

  • CP000109: Thiomicrospira crunogena XCL-2, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;Piscirickettsiaceae; Thiomicrospira. ]

Thiomicrospira denitrificans ATCC 33889

The database was generated from the following GenBank entries:

  • CP000153: Thiomicrospira denitrificans ATCC 33889, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae. ]

Treponema denticola ATCC 35405

The database was generated from the following GenBank entries:

  • AE017226: Treponema denticola ATCC 35405, complete genome.
  • AF112856: Treponema denticola plasmid pTS1, complete sequence.
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema. ]

Treponema pallidum subsp. pallidum str. Nichols

The database was generated from the following GenBank entries:

  • AE000520: Treponema pallidum subsp. pallidum str. Nichols complete genome.
[Taxonomy: Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema. ]

Tropheryma whipplei TW08/27

The database was generated from the following GenBank entries:

  • BX072543: Tropheryma whipplei TW08/27, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Micrococcineae; Cellulomonadaceae; Tropheryma. ]

Tropheryma whipplei str. Twist

The database was generated from the following GenBank entries:

  • AE014184: Tropheryma whipplei str. Twist, complete genome.
[Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;Micrococcineae; Cellulomonadaceae; Tropheryma. ]

Ureaplasma parvum serovar 3 str. ATCC 700970

The database was generated from the following GenBank entries:

  • AF222894: Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
[Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Ureaplasma. ]

Vibrio cholerae O1 biovar eltor str. N16961

The database was generated from the following GenBank entries:

  • AE003853: Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete
  • AE003852: Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete
  • AF052650: Vibrio cholerae strain O395P plasmid pTLC, complete sequence.
  • AY876057: Vibrio cholerae strain SIO plasmid pSIO1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Vibrio. ]

Vibrio fischeri ES114

The database was generated from the following GenBank entries:

  • CP000020: Vibrio fischeri ES114 chromosome I, complete sequence.
  • CP000021: Vibrio fischeri ES114 chromosome II, complete sequence.
  • CP000022: Vibrio fischeri ES114 plasmid pES100, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Vibrio. ]

Vibrio parahaemolyticus RIMD 2210633

The database was generated from the following GenBank entries:

  • BA000031: Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete
  • BA000032: Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete
  • VIBPSA19: Vibrio parahaemolyticus plasmid pSA19 DNA, complete sequence.
  • AP000581: Vibrio parahaemolyticus plasmid pO3K6 DNA, complete sequence.
  • VIBPSA19: Vibrio parahaemolyticus plasmid pSA19 DNA, complete sequence.
  • AP000581: Vibrio parahaemolyticus plasmid pO3K6 DNA, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Vibrio. ]

Vibrio vulnificus CMCP6

The database was generated from the following GenBank entries:

  • AE016795: Vibrio vulnificus CMCP6 chromosome I complete sequence.
  • AE016796: Vibrio vulnificus CMCP6 chromosome II, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Vibrio. ]

Vibrio vulnificus YJ016

The database was generated from the following GenBank entries:

  • BA000037: Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence.
  • BA000038: Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence.
  • AP005352: Vibrio vulnificus YJ016 plasmid pYJ016 DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;Vibrionaceae; Vibrio. ]

Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

The database was generated from the following GenBank entries:

  • AB063523: Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
  • BA000021: Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
  • AB063523: Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Wigglesworthia. ]

Wolbachia endosymbiont of Drosophila melanogaster

The database was generated from the following GenBank entries:

  • AE017196: Wolbachia endosymbiont of Drosophila melanogaster, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Wolbachieae; Wolbachia. ]

Wolbachia endosymbiont strain TRS of Brugia malayi

The database was generated from the following GenBank entries:

  • AE017321: Wolbachia endosymbiont strain TRS of Brugia malayi, complete
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;Rickettsiaceae; Wolbachieae; Wolbachia. ]

Wolinella succinogenes DSM 1740

The database was generated from the following GenBank entries:

  • BX571656: Wolinella succinogenes DSM 1740, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;Helicobacteraceae; Wolinella. ]

Xanthomonas axonopodis pv. citri str. 306

The database was generated from the following GenBank entries:

  • AE008923: Xanthomonas axonopodis pv. citri str. 306, complete genome.
  • AE008924: Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC33, complete
  • AE008925: Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC64, complete
  • AE008924: Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC33, complete
  • AE008925: Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC64, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xanthomonas campestris pv. campestris str. 8004

The database was generated from the following GenBank entries:

  • CP000050: Xanthomonas campestris pv. campestris str. 8004, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xanthomonas campestris pv. campestris str. ATCC 33913

The database was generated from the following GenBank entries:

  • AE008922: Xanthomonas campestris pv. campestris str. ATCC 33913, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xanthomonas campestris pv. vesicatoria str. 85-10

The database was generated from the following GenBank entries:

  • AM039952: Xanthomonas campestris pv. vesicatoria complete genome.
  • AM039948: Xanthomonas campestris pv. vesicatoria plasmid pXCV2.
  • AM039949: Xanthomonas campestris pv. vesicatoria plasmid pXCV19, complete
  • AM039950: Xanthomonas campestris pv. vesicatoria plasmid pXCV38, complete
  • AM039951: Xanthomonas campestris pv. vesicatoria plasmid pXCV183, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xanthomonas oryzae pv. oryzae KACC10331

The database was generated from the following GenBank entries:

  • AE013598: Xanthomonas oryzae pv. oryzae KACC10331, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xanthomonas oryzae pv. oryzae MAFF 311018

The database was generated from the following GenBank entries:

  • AP008229: Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xanthomonas. ]

Xylella fastidiosa 9a5c

The database was generated from the following GenBank entries:

  • AE003849: Xylella fastidiosa 9a5c, complete genome.
  • AE003850: Xylella fastidiosa 9a5c plasmid pXF1.3, complete sequence.
  • AE003851: Xylella fastidiosa 9a5c plasmid pXF51, complete sequence.
  • AE003851: Xylella fastidiosa 9a5c plasmid pXF51, complete sequence.
  • AE003850: Xylella fastidiosa 9a5c plasmid pXF1.3, complete sequence.
  • XFU71220: Xylella fastidiosa plasmid pXF868, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xylella. ]

Xylella fastidiosa Temecula1

The database was generated from the following GenBank entries:

  • AE009442: Xylella fastidiosa Temecula1, complete genome.
  • AE009443: Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.
  • XFU71220: Xylella fastidiosa plasmid pXF868, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;Xanthomonadaceae; Xylella. ]

Yersinia pestis Antiqua

The database was generated from the following GenBank entries:

  • CP000308: Yersinia pestis Antiqua, complete genome.
  • CP000309: Yersinia pestis Antiqua plasmid pMT, complete sequence.
  • CP000310: Yersinia pestis Antiqua plasmid pPCP, complete sequence.
  • CP000311: Yersinia pestis Antiqua plasmid pCD, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Yersinia pestis CO92

The database was generated from the following GenBank entries:

  • AL590842: Yersinia pestis strain CO92 complete genome.
  • YPPMT1: Yersinia pestis CO92 plasmid pMT1.
  • YPCD1: Yersinia pestis CO92 plasmid pCD1.
  • YPPCP1: Yersinia pestis CO92 plasmid pPCP1.
  • YPPMT1: Yersinia pestis CO92 plasmid pMT1.
  • YPPCP1: Yersinia pestis CO92 plasmid pPCP1.
  • YPCD1: Yersinia pestis CO92 plasmid pCD1.
  • YPPMT1: Yersinia pestis CO92 plasmid pMT1.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Yersinia pestis KIM

The database was generated from the following GenBank entries:

  • AE009952: Yersinia pestis KIM, complete genome.
  • AF053945: Yersinia pestis KIM plasmid pPCP1, complete sequence.
  • AF074611: Yersinia pestis KIM plasmid pMT-1, complete sequence.
  • AF053946: Yersinia pestis KIM plasmid pCD1, complete sequence.
  • AF053947: Yersinia pestis KIM plasmid pMT1, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Yersinia pestis Nepal516

The database was generated from the following GenBank entries:

  • CP000305: Yersinia pestis Nepal516, complete genome.
  • CP000306: Yersinia pestis Nepal516 plasmid pMT, complete sequence.
  • CP000307: Yersinia pestis Nepal516 plasmid pPCP, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Yersinia pestis biovar Medievalis str. 91001

The database was generated from the following GenBank entries:

  • AE017042: Yersinia pestis biovar Medievalis str. 91001 complete genome.
  • AE017043: Yersinia pestis biovar Mediaevails str. 91001 plasmid pCD1,
  • AE017044: Yersinia pestis biovar Mediaevails str. 91001 plasmid pCRY,
  • AE017045: Yersinia pestis biovar Mediaevails str. 91001 plasmid pMT1,
  • AE017046: Yersinia pestis biovar Mediaevails str. 91001 plasmid pPCP1,
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
  • AF152923: Yersinia pestis CH971662 cryptic plasmid pYC, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Yersinia pseudotuberculosis IP 32953

The database was generated from the following GenBank entries:

  • BX936398: Yersinia pseudotuberculosis IP32953 genome, complete sequence.
  • BX936399: Yersinia pseudotuberculosis IP32953 pYV plasmid, complete sequence.
  • BX936400: Yersinia pseudotuberculosis IP32953 cryptic plasmid, complete
[Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;Enterobacteriaceae; Yersinia. ]

Zymomonas mobilis subsp. mobilis ZM4

The database was generated from the following GenBank entries:

  • AE008692: Zymomonas mobilis subsp. mobilis ZM4, complete genome.
  • AY057845: Zymomonas mobilis strain ZM4 plasmid 1, complete sequence.
  • AF030624: Zymomonas mobilis plasmid pZMO1, complete plasmid sequence.
  • ZMO009976: Zymomonas mobilis ATCC 10988 cryptic plasmid pZMO2 encoding
  • AY057845: Zymomonas mobilis strain ZM4 plasmid 1, complete sequence.
[Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;Sphingomonadaceae; Zymomonas. ]




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