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Output format
DESCRIPTION
Coming soon ...
EXAMPLE OUTPUT
For the input molecule CCOC(=O)C1=CC=C(C=C1)N (benzocaine) and the
indication ADHD [PA128407015] the following output is obtained:
PGx pipeline 1.0 running on genome
Converting SMI to SDF ................................ done
Generating structural fingerprints ................... done
Running whole genome rank:
Reading drug fingerprints .......................... 1 read
Reading drug indications ........................... 1 read
Reading hugo gene nomenclature ................. 18069 read
Reading drug-disease relations ................... 401 read
Reading drug-fingerprint relations .............. 1257 read
Reading gene-drug interactions .................. 1555 read
Reading node_id => ensembl id translations ..... 22998 read
Reading Inweb interactome ......... 12454 pulldowns created
compound1 data generated (75 sec.)
| Gene |
Symbol |
Score |
-log(P) |
|
|
| ENSG00000170743 |
SYT9 |
2.08 |
4.40 |
|
details |
| ENSG00000143553 |
SNAPAP |
2.04 |
3.92 |
|
details |
| ENSG00000124333 |
SYBL1 |
1.96 |
3.17 |
|
details |
In this example the number of output genes has been limited to 3 deliberately.
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