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RevTrans 1.4 Server[NOTICE: New improved version is now open for testing: RevTrans 2.0]RevTrans takes a set of DNA sequences, virtually translates them, aligns the peptide sequences, and uses this as a scaffold for constructing the corresponding DNA multiple alignment. New in RevTrans 1.4: Improvements in the transcription model, restriction on 75 sequences removed, more alignments programs: Dialign 2, Dialign-T and ClustalW, - [Previous version: RevTrans 1.3]
Restrictions: If no peptide alignment is present the RevTrans server will produce one by translating the DNA sequences and running dialign2 with standard settings. RevTrans will accept abitrary large input if you supply your own alignment.
Confidentiality:
CITATIONSFor publication of results, please cite:
Rasmus Wernersson and Anders Gorm Pedersen. View the abstract. PORTABLE VERSIONWould you prefer to run RevTrans at your own site? The command line version of RevTrans 1.3 is free software and can be downloaded from here. The command line version RevTrans is without the integration with Dialign2. The RevTrans web-server is available as a package on a commercial license.
Currently available platforms include
MIPS (under IRIX, Silicon Graphics),
Pentium family (Linux) and most other UNIX based systems.
Send inquiries by e-mail to
software@cbs.dtu.dk.
GETTING HELP
Scientific problems:
Technical problems:
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