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SecretomeP 1.0f Server

Prediction of non-classical protein secretion

The SecretomeP 1.0f server produces ab initio predictions of non-classical i.e. not signal peptide triggered protein secretion in eukaryotes. The method queries a large number of other feature prediction servers to obtain information on various post-translational and localizational aspects of the protein, which are integrated into the final secretion prediction.

View the version history of this server.

Instructions Output format Article abstract Data sets

SUBMISSION

Paste a single sequence or several sequences in FASTA format into the field below:

Submit a file in FASTA format directly from your local disk:

Sort the output by prediction score    Report the progress of the prediction process

Restrictions:
At most 500 sequences and 200,000 amino acids per submission; each sequence not less than 15 and not more than 4,000 amino acids.

Confidentiality:
The sequences are kept confidential and will be deleted after processing.


CITATIONS

For publication of results, please cite:

Feature based prediction of non-classical and leaderless protein secretion.
J. Dyrløv Bendtsen, L. Juhl Jensen, N. Blom, G. von Heijne and S. Brunak.
Protein Eng. Des. Sel., 17(4):349-356, 2004

View the abstract.


PORTABLE VERSION

Would you prefer to run SecretomeP at your own site? SecretomeP 1.0 is available as a package on a commercial license. Currently available platforms include MIPS (under IRIX, Silicon Graphics) and Pentium family (under Linux and CYGWIN). Send inquiries by e-mail to software@cbs.dtu.dk.


GETTING HELP

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