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TMHMM Server v. 2.0

Prediction of transmembrane helices in proteins


Instructions

SUBMISSION

Submission of a local file in FASTA format (HTML 3.0 or higher)

OR by pasting sequence(s) in FASTA format:


Output format:
Extensive, with graphics
Extensive, no graphics
One line per protein

Other options:
Use old model (version 1)

Restrictions:
At most 10,000 sequences and 4,000,000 amino acids per submission; each sequence not more than 8,000 amino acids.

Confidentiality:
The sequences are kept confidential and will be deleted after processing.


PORTABLE VERSION

Would you prefer to run TMHMM at your own site? TMHMM 2.0 is available as a stand-alone software package, with the same functionality as the service above. Ready-to-ship packages exist for the most common UNIX platforms. There is a download page for academic users; other users are requested to contact CBS Software Package Manager at software@cbs.dtu.dk.


GETTING HELP

Scientific problems:        Technical problems: