![]() |
|
||||
![]() |
|||||
|
TargetP 1.1 ServerTargetP 1.1 predicts the subcellular location of eukaryotic proteins. The location assignment is based on the predicted presence of any of the N-terminal presequences: chloroplast transit peptide (cTP), mitochondrial targeting peptide (mTP) or secretory pathway signal peptide (SP). For the sequences predicted to contain an N-terminal presequence a potential cleavage site can also be predicted. NOTE 1: TargetP uses ChloroP and SignalP to predict cleavage sites for cTP and SP, respectively. NOTE 2: The method has been tested on A. thaliana and H. sapiens sets; see the results.
New: the paper about using TargetP and other protein subcellular localization prediction methods:
Locating proteins in the cell using TargetP,
SignalP, and related tools Olof Emanuelsson, S??ren Brunak, Gunnar von Heijne, Henrik Nielsen Nature Protocols 2, 953-971 (2007). is now again available for download - please click here.
CITATIONSFor publication of results, please cite:
Predicting subcellular localization of proteins based on their N-terminal
amino acid sequence. View the abstract. If you have used the predictions of the signal peptide cleavage sites please also cite:
Identification of prokaryotic and eukaryotic signal peptides
and prediction of their cleavage sites. View the abstract.
PORTABLE VERSIONWould you prefer to run TargetP at your own site? TargetP 1.1 is available
as a stand-alone software package, with the same functionality as the service
above. Ready-to-ship packages exist for the most common UNIX platforms. There
is a
download page
for academic users; other users are requested to contact CBS Software Package
Manager at software@cbs.dtu.dk.
GETTING HELP
Scientific problems:
Technical problems:
|