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Usage instructions

1. Specify the input sequences

The sequences intended for processing can be input in the following two ways:

  • Paste a single sequence (just the nucleotides) or a number of sequences in FASTA format into the upper window of the main server page.

  • Select a FASTA file on your local disk, either by typing the file name into the lower window or by browsing the disk.

Both ways can be employed at the same time: all the specified sequence will be processed.

The allowed input alphabet is A, C, G, T and X (unknown); all the other symbols will be converted to X before processing.

2. Select the output format

Click on the "Full output" button if you want the input sequences to be included in the server output. The default output format shows the predictions only.

3. Submit the job

Click on the "Submit" button. The status of your job (either 'queued' or 'running') will be displayed and constantly updated until it terminates and the server output appears in your browser window.

NOTE: At any time during the wait you may enter your e-mail address and simply leave the window. Your job will continue; you will be notified by e-mail when it has terminated. The e-mail message will contain the URL under which the results are stored; they will remain on the server for 24 hours for you to collect them.


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