Web Services at CBS

NUCLEOTIDE SEQUENCES Whole genome visualization and analysis  BLASTatlas Mapping of whole genome homology   - new version 1.0a - GeneWiz Visualization of DNA properties  GenomeAtlas DNA structural atlases for complete microbial Genomes  SIDDbase Calculation of Stress-induced DNA duplex destabilization Gene finding and splice sites  EasyGene Genes in prokaryotes  RNAmmer Ribosomal RNA sub units Miscellaneous  MaxAlign Maximizing alignment area SMALL MOLECULES  hERG Cardiotoxicity of drugs

AMINO ACID SEQUENCES Protein sorting SignalP  Signal peptide and cleavage sites in gram+, gram- and eukaryotic amino acid sequences SignalP4  Signal peptide and cleavage sites in gram+, gram- and eukaryotic amino acid sequences Post-translational modifications of proteins NetGlycate  Glycation of ε amino groups of lysines in mammalian proteins NetNGlyc  N-linked glycosylation sites in human proteins NetOGlyc  O-GalNAc (mucin type) glycosylation sites in mammalian proteins NetPhos  Generic phosphorylation sites in eukaryotic proteins Immunological features NetChop  Proteasomal cleavages (MHC ligands) NetCTL  Integrated class I antigen presentation NetMHCcons  Binding of peptides to any known MHC class I molecule Protein function and structure EPipe  Functional differences of protein variants TMHMM  Transmembrane helices in proteins