Supplementary Table 1 | |
Listing of all proteins in the 15 top scoring complexes | |
RNAse P | |
Protein description | Accessions |
Ribonuclease P protein subunit p38 (EC 3.1.26.5) (RNaseP protein p38). (Homo sapiens) | NP_006405 Q80UU2 ENSMUSP00000050992 ENSGALP00000014282 ENSRNOP00000022129 ENSDARP00000004897 SINFRUP00000161090 ENSPTRP00000003925) |
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4). (Homo sapiens) | NP_006618 POP4_YEAST ENSMUSP00000032585 Q9XVT1 CG8038-PA ENSP00000221770 ENSGALP00000007088 Q9ZW76 ENSRNOP00000020474 ENSPTRP00000018461 RNP1_SCHPO ENSCBRP00000006754 ENSDARP00000024490 ENSANGP00000014077) |
Processing of 1, ribonuclease P/MRP subunit. (Homo sapiens) | NP_055844 O22903 Q9W4A7 YPD9_CAEEL Q8K205) |
RPP25 protein (RNase P protein subunit p25). (Homo sapiens) | Q9BUL9 Q9NX88 Q91WE3 ENSPTRP00000012475 CG9422-PA ENSRNOP00000025408 ENSGALP00000022814 ENSP00000297613 Q9LNU5 ENSANGP00000016002) |
60S ribosomal subunit | |
Protein description | Accessions |
60S ribosomal protein L9. (Homo sapiens) | NP_000652 ENSGALP00000000205 ENSCBRP00000009203 ENSRNOP00000029899 RL9B_YEAST RL9_CAEEL SINFRUP00000142417 RL9_ARATH ENSMUSP00000067668 RL9A_SCHPO Q8LCC2 RL9A_YEAST CG6141-PA ENSDARP00000027282 ENSANGP00000011018 Q9SZX9 ENSMUSP00000057773 ENSRNOP00000034928 ENSMUSP00000031098 ENSMUSP00000069046 ENSMUSP00000067206) |
40S ribosomal protein S6 (Phosphoprotein NP33). (Homo sapiens) | NP_001001 ENSDARP00000011148 CG10944-PC SINFRUP00000141607 ENSRNOP00000010383 ENSANGP00000011100 RS6A_SCHPO Q8N6Z7 ENSCBRP00000002338 Q96DV6 Q9NEN6 O81777 RS6_YEAST RS6B_SCHPO ENSMUSP00000057420 ENSPTRP00000035586 Q8BT09 ENSMUSP00000050003 RS6_DROME O48549 ENSGALP00000024283 ENSMUSP00000054386 ENSMUSP00000064160 ENSMUSP00000049954) |
60S ribosomal protein L27. (Homo sapiens) | P08526 ENSP00000342266 Q9CSM4 C53H9.1 ENSCBRP00000003728 ENSANGP00000028538 Q9SKX8 ENSDARP00000018737 SINFRUP00000137482 Q9VBN5 RL27_YEAST R27B_SCHPO Q9LIE0 ENSMUSP00000057502 ENSRNOP00000001339 RL27_ARATH R27A_SCHPO ENSMUSP00000052487) |
60S ribosomal protein L13 (Breast basic conserved protein 1) (OK/SW-cl.46). (Homo sapiens) | P26373 R13A_YEAST R13B_YEAST ENSPTRP00000014462 ENSMUSP00000052683 ENSANGP00000018501 ENSRNOP00000020635 Q9FF90 RL13_SCHPO ENSGALP00000009960 CG4651-PA RL13_CAEEL ENSP00000307889 SINFRUP00000141578 ENSCBRP00000011728 RL13_MOUSE RL13_ARATH ENSRNOP00000037074 ENSRNOP00000020701 ENSMUSP00000067088 Q8LFC4) |
60S ribosomal protein L10 (QM protein) (Tumor suppressor QM) (Lamininreceptor homolog). (Homo sapiens) | P27635 Q8TDA5 ENSDARP00000009442 Q93W22 RL10_YEAST RL10_CAEEL ENSCBRP00000000736 Q93VT9 ENSP00000339021 CG17521-PA SINFRUP00000144352 ENSANGP00000014921 ENSMUSP00000008826 RL1A_SCHPO RL1B_SCHPO RL10_MOUSE ENSANGP00000023750 RL10_ARATH ENSPTRP00000010698 ENSMUSP00000063914 ENSMUSP00000065634 ENSMUSP00000002030 ENSMUSP00000061552) |
60S ribosomal protein L12. (Bos taurus) | P30050 SINFRUP00000142732 RL12_SCHPO CG3195-PC ENSMUSP00000054935 RL12_YEAST ENSDARP00000009096 ENSRNOP00000013541 ENSGALP00000014298 ENSANGP00000019214 Q9FF52 JC8.3a ENSCBRP00000005665 ENSRNOP00000029360 ENSMUSP00000059181 ENSRNOP00000021725 Q9LFH5 ENSRNOP00000038140 ENSRNOP00000029763 ENSMUSP00000048975 RL12_ARATH) |
60S ribosomal protein L21. (Homo sapiens) | P46778 C14B9.7 ENSANGP00000014054 ENSRNOP00000001265 ENSDARP00000016158 ENSP00000346003 CG12775-PA RL21_CAEEL SINFRUP00000158461 R21A_SCHPO R21A_YEAST R21B_SCHPO Q9FDZ9 RL21_ARATH R21B_YEAST ENSGALP00000027571 ENSP00000294823 ENSCBRP00000014690 ENSMUSP00000067211 ENSMUSP00000063288 ENSRNOP00000013309 ENSRNOP00000020774 ENSRNOP00000022850 ENSRNOP00000004397 RL21_MOUSE ENSMUSP00000067302 ENSMUSP00000049914 ENSRNOP00000014422 ENSMUSP00000062952 ENSMUSP00000070628 ENSRNOP00000033254 ENSMUSP00000068421 ENSMUSP00000065599 ENSMUSP00000059911 ENSRNOP00000038155) |
60S ribosomal protein L18. (Homo sapiens) | Q07020 SINFRUP00000138747 Y45F10D.12 ENSANGP00000010955 RL18_SCHPO Q8TFH1 ENSMUSP00000000012 RL18_ARATH ENSRNOP00000028555 RL18_YEAST ENSDARP00000021373 RL18_MOUSE ENSP00000084795 ENSCBRP00000004945 CG8615-PA Q940B0 ENSMUSP00000053486) |
60S ribosomal protein L15. (Homo sapiens) | NP_013129 ENSCBRP00000000772 RL15_SCHPO Q9US22 ENSP00000274685 ENSP00000309334 ENSANGP00000026442 ENSGALP00000018397 ENSMUSP00000050606 ENSMUSP00000053791 SINFRUP00000128118) |
40S ribosomal protein S8 (S14) (YS9) (RP19). (Saccharomyces cerevisiae) | NP_009481 ENSMUSP00000069722 ENSGALP00000016447 ENSMUSP00000016864 ENSMUSP00000070384 ENSCBRP00000009061 Q93VG5 ENSP00000271105 ENSANGP00000014951 ENSMUSP00000065315 ENSRNOP00000025796 RS8B_SCHPO ENSDARP00000007999 ENSMUSP00000062904 SINFRUP00000159588 RS8A_SCHPO) |
60S ribosomal protein L30 (YL32) (RP73). (Saccharomyces cerevisiae) | NP_011485 ENSP00000287038 ENSMUSP00000051122 ENSANGP00000018909 ENSMUSP00000063370 ENSMUSP00000055336 ENSDARP00000009443 ENSMUSP00000058672 ENSMUSP00000050611 R30B_SCHPO SINFRUP00000140275 ENSGALP00000013355 ENSMUSP00000061615 ENSCBRP00000004965 RL30_ARATH) |
Ribosome biogenesis (pre-60S) | |
Protein description | Accessions |
DEAD-box protein 54 (EC 3.6.1.-) (ATP-dependent RNA helicase DP97). (Homo sapiens) | ENSP00000304072 ENSPTRP00000009302 CG32344-PA ENSCBRP00000013649 O49289 ENSANGP00000019143 Q95XS9 ENSRNOP00000001859 ENSP00000304072 Q8K4L0 ENSGALP00000012094 ENSDARP00000017797 DBPA_YEAST ENSMUSP00000031598 Q8CD39 SINFRUP00000155902 YA47_SCHPO Q8CD14) |
NNP-1 protein (Novel nuclear protein 1) (Nucleolar protein Nop52)(Nop52) (D21S2056E). (Homo sapiens) | NP_003674 ENSPTRP00000024033 SINFRUP00000145921 NNP1_DROME Q9Y7M6 ENSCBRP00000007197 YXX7_CAEEL ENSMUSP00000058785 ENSDARP00000033465 Q8RY12 ENSP00000291561 NNP1_MOUSE ENSANGP00000010288 RRP1_YEAST ENSRNOP00000001597 ENSPTRP00000024024 ENSGALP00000002213) |
Probable ATP-dependent 61 kDa nucleolar RNA helicase (EC 3.6.1.-)(DEAD-box protein 56) (DEAD-box protein 21). (Homo sapiens) | NP_061955 C24H12.4a DBP9_YEAST ENSANGP00000027746 ENSCBRP00000012426 ENSMUSP00000004507 ENSPTRP00000032712 DX56_MOUSE Q8BK66 Q9SW44 ENSDARP00000017744 Q9VRI0 O60080 SINFRUP00000160753 ENSRNOP00000006642 ENSP00000258772) |
MKI67 (FHA domain) interacting nucleolar phosphoprotein. (Homo sapiens) | NP_115766 Q9BYG3 ENSRNOP00000036523 ENSPTRP00000021260 O74978 Q22135 CG6937-PA ENSCBRP00000003048 ENSMUSP00000027626 Q9LZ65 ENSGALP00000019016 ENSDARP00000005324 YNL0_YEAST SINFRUP00000159266 Q8BVL4) |
Pescadillo homolog 1. (Homo sapiens) | O00541 ENSGALP00000012605 ENSMUSP00000020705 SINFRUP00000173339 Q9VL96 R13A5.12 ENSCBRP00000009204 PESC_SCHPO PESC_YEAST ENSRNOP00000005996 Q9LYK7 ENSPTRP00000024541 ENSDARP00000026992 ENSANGP00000011185) |
Nuclear valosin-containing protein-like (Nuclear VCP-like protein)(NVLp). (Homo sapiens) | O15381 RUVB_ECOLI C48C_ARATH SINFRUP00000130725 Q9NAG4 NVL_MOUSE ENSMUSP00000027797 ENSCBRP00000001325 O14325 Q9U8K0 YL34_YEAST ENSRNOP00000004927 ENSDARP00000032193 ENSPTRP00000003393 ENSGALP00000015159 ENSP00000274008 Q46766 CG8571-PA NP_010157 ENSCBRP00000007001 ENSMUSP00000030164 ENSRNOP00000014504 O76279 ENSP00000344091 ENSGALP00000003089 CG2331-PA Q8CEG4 ENSANGP00000022801 ENSDARP00000014132 ENSPTRP00000035750 TER1_CAEEL TERA_MOUSE SINFRUP00000148416 Q8BSR6 CC48_SCHPO C48E_ARATH NP_014070 ENSPTRP00000031062 Q8WYQ2 PEX6_HUMAN PEX6_SCHPO O16270 ENSMUSP00000002840 Q99LC9 Q9SA70 CG30019-PA SINFRUP00000152384 ENSGALP00000013944 ENSRNOP00000022582 ENSANGP00000018134) |
TGF beta-inducible nuclear protein 1 (Hairy cell leukemia protein 1)(HUSSY-29). (Homo sapiens) | O95478 W09C5.1 CG5277-PA Q9UU79 ENSDARP00000003036 YEV6_YEAST ENSANGP00000023534 ENSGALP00000024059 Q9FNH2 SINFRUP00000155317 TIP1_MOUSE ENSCBRP00000000373 ENSMUSP00000062364 ENSRNOP00000022138) |
CCAAT/enhancer binding protein zeta (CCAAT-box-binding transcriptionfactor) (CCAAT-binding factor) (CBF). (Homo sapiens) | Q03701 ENSCBRP00000010501 SINFRUP00000131304 ENSANGP00000014065 CG7839-PA CBF_MOUSE Q8MSS0 YEK9_SCHPO ENSPTRP00000020326 F23B12.7 ENSGALP00000017234 MK21_YEAST Q9C9E2 ENSP00000234170 ENSDARP00000007958 ENSMUSP00000024885 ENSRNOP00000006824) |
Nucleolar GTP-binding protein 2 (Autoantigen NGP-1). (Homo sapiens) | Q13823 Q9C923 Q9XXN4 ENSCBRP00000009907 ENSPTRP00000000969 P70410 SINFRUP00000136784 ENSDARP00000015900 Q9V844 O14236 ENSRNOP00000012702 ENSGALP00000003063 YN8U_YEAST ENSMUSP00000030684 Q8BIF8 Q99LH1) |
FtsJ homolog 3. (Homo sapiens) | Q8IY81 SINFRUP00000148673 Q9N5N9 ENSMUSP00000021048 CG8939-PA ENSDARP00000002086 SPB1_YEAST PMT2_SCHPO ENSRNOP00000013295 Q9SW10 ENSANGP00000026202 ENSGALP00000000441 ENSPTRP00000016175 Q8WXX1 ENSCBRP00000005108 ENSP00000337518 Q8VZJ4 Q921I7) |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55. (Homo sapiens) | Q8NHQ9 O74764 CG9630-PA ENSDARP00000020323 Q9FLB0 Q810A4 ENSANGP00000009871 ENSRNOP00000001387 YOQ2_CAEEL ENSCBRP00000007452 SPB4_YEAST ENSPTRP00000009525 ENSGALP00000005215 ENSP00000238146 SINFRUP00000136408 Q9C9H4 Q8GXD6) |
AD24 (Chromosome 10 open reading frame 117). (Homo sapiens) | Q8WTT2 Q07896 ENSMUSP00000025963 Q9VI82 ENSANGP00000023490 C37H5.5 ENSRNOP00000019056 SINFRUP00000155643 O64537 YOO3_SCHPO Q8VI84 ENSPTRP00000004844 ENSGALP00000010528 ENSDARP00000004350 ENSCBRP00000000546) |
RNA processing factor 1 (RPF1). (Homo sapiens) | Q8WXZ8 ENSDARP00000026391 ENSANGP00000006009 Q9H9Y2 F44G4.1 Q9VKB4 ENSRNOP00000021705 ENSCBRP00000006829 RPF1_YEAST Q7TND5 O82589 SINFRUP00000148590 YDS4_SCHPO ENSGALP00000014284) |
Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27)(HSPC259) (PP3241). (Homo sapiens) | Q96GQ7 YAJ3_SCHPO CG2173-PA ENSGALP00000011283 ENSMUSP00000018143 ENSCBRP00000004276 Q95XM9 ENSPTRP00000023399 ENSANGP00000003952 Q9ZRZ8 DD27_MOUSE DRS1_YEAST ENSRNOP00000010806 SINFRUP00000138387 ENSDARP00000030723 SRMB_ECOLI DBP1_YEAST) |
Probable rRNA processing protein EBP2 (EBNA1 binding protein 2)(Nucleolar protein p40). (Homo sapiens) | Q99848 EBP2_SCHPO ENSDARP00000018146 EBP2_DROME C18A3.3 EBP2_ARATH ENSRNOP00000009314 ENSPTRP00000001079 ENSGALP00000014708 ENSANGP00000011380 ENSMUSP00000030501 ENSCBRP00000006501 SINFRUP00000143162 EBP2_YEAST ENSP00000236051) |
mRNA turnover protein 4 homolog. (Homo sapiens) | Q9BPV9 Q19302 SINFRUP00000164023 ENSMUSP00000030513 ENSANGP00000021519 Q96SS6 Q94AK8 ENSGALP00000006350 CG1381-PA Q9UKD2 ENSRNOP00000024326 YKA9_YEAST ENSPTRP00000000463 Q9USZ6 ENSDARP00000002982) |
Hypothetical protein FLJ10498. (Homo sapiens) | Q9NVU7 Q9NEU2 Q80UZ2 Q9V536 Q9SAE9 YG58_YEAST Q8CDL7 YBLE_SCHPO ENSPTRP00000027804 ENSCBRP00000000946 ENSANGP00000013143 ENSDARP00000015699 ENSRNOP00000035588 ENSGALP00000018803 SINFRUP00000161010) |
60S ribosome subunit biogenesis protein NIP7 homolog (KD93) (CGI-37)(HSPC031/HSPC180) (OK/SW-cl.76/OK/SW-cl.78). (Homo sapiens) | Q9Y221 ENSANGP00000001317 Q9CXK8 Q9VC28 C43E11.9 O59788 ENSGALP00000000921 ENSRNOP00000027653 SINFRUP00000143271 O23428 NIP7_YEAST ENSCBRP00000013222 Q9D1B4) |
Ribosome biogenesis (mostly pre-40S) | |
Protein description | Accessions |
Guanine nucleotide-binding protein beta subunit 2-like 1 (Receptor ofactivated protein kinase C 1) (RACK1) (Receptor for activated Ckinase) (p205) (12-3). (Mus musculus) | P25388 ENSMUSP00000020640 GBLP_YEAST CG7111-PA K04D7.1 SINFRUP00000164680 ENSP00000274821 ENSPTRP00000030154 GBLP_SCHPO ENSRNOP00000003334 ENSANGP00000012560 ENSDARP00000021134 GBLP_CAEEL ENSCBRP00000007165 Q9LV28 GBLP_ARATH Q9C4Z6) |
Protein C14orf120. (Homo sapiens) | Q8NEJ9 ENSRNOP00000024337 ENSMUSP00000022815 C48E7.3 SINFRUP00000132774 ENSPTRP00000010485 ENSDARP00000020054 YA36_SCHPO Q93ZQ9 LCP5_YEAST CG11030-PA ENSANGP00000026419 ENSCBRP00000014295 Q8IGY8 Q8CIJ2 Q9Y400 ENSMUSP00000064388) |
Putatative 28 kDa protein (RNA-binding protein LOC56902). (Homo sapiens) | Q9NRX1 Q99216 ENSRNOP00000007824 ENSCBRP00000002062 O18216 Q9LTU6 Q9VR89 ENSDARP00000004926 ENSGALP00000014788 ENSMUSP00000020317 ENSANGP00000011294 ENSPTRP00000020608 O14044) |
Probable dimethyladenosine transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N,N-adenosyl(rRNA) dimethyltransferase) (18SrRNA dimethylase) (HUSSY-05). (Homo sapiens) | Q9UNQ2 ENSDARP00000019455 E02H1.1 DIMH_MOUSE O22268 ENSCBRP00000002271 DIM1_SCHPO DIMH_DROME DIM1_YEAST ENSRNOP00000018527 SINFRUP00000151220 ENSANGP00000016944 ENSGALP00000022156 KSGA_ECOLI) |
RNA polymerase II initiation regulation | |
Protein description | Accessions |
Cell division protein kinase 9 (EC 2.7.1.37) (Serine/threonine-proteinkinase PITALRE) (C-2K). (Homo sapiens) | P50750 SINFRUP00000158005 ENSPTRP00000036573 Q99J95 CG5179-PA CDK9_SCHPO ENSGALP00000008078 H25P06.2b ENSDARP00000008592 ENSANGP00000020806 ENSCBRP00000003593) |
Transcription initiation factor IIB (General transcription factorTFIIB) (S300-II). (Homo sapiens) | Q00403 TF2B_SCHPO ENSPTRP00000001610 W03F9.5 ENSANGP00000020059 ENSCBRP00000010943 ENSMUSP00000029938 TF2B_YEAST TF2B_DROME TFB1_ARATH ENSDARP00000009188 TFB2_ARATH TF2B_MOUSE ENSGALP00000010001 SINFRUP00000135590) |
Transcription elongation factor B polypeptide 2 (RNA polymerase IItranscription factor SIII subunit B) (SIII p18) (Elongin B) (EloB)(Elongin 18 kDa subunit). (Homo sapiens) | NP_009039 ENSRNOP00000006892 ENSANGP00000016615 Q9XWU4 CG4204-PA ELOB_MOUSE ENSPTRP00000013091 ENSDARP00000015496 SINFRUP00000162159 ENSP00000262306) |
Ribosome biogenesis (pre-60S) | |
Protein description | Accessions |
Structure-specific recognition protein 1 (SSRP1) (Recombination signalsequence recognition protein) (T160) (Chromatin-specific transcriptionelongation factor 80 kDa subunit) (FACT 80 kDa subunit). (Homo sapiens) | NP_003137 ENSMUSP00000028463 SINFRUP00000166989 Q86NM5 SSRP_MOUSE SSRP_DROME O94529 YMG9_YEAST T20B12.8 ENSPTRP00000006312 ENSGALP00000012145 ENSCBRP00000009869 ENSANGP00000009009 ENSDARP00000014032 ENSRNOP00000012022 SSRP_ARATH Q8CGA6 ENSCBRP00000008886) |
Proliferating-cell nucleolar antigen p120 (Proliferation-associatednucleolar protein p120). (Homo sapiens) | NP_006161 Q8VYM6 Q9TYV5 ENSP00000313272 O94268 CG8545-PA ENSRNOP00000024938 ENSDARP00000032035 ENSPTRP00000007827 Q922K7 NOP2_YEAST SINFRUP00000156109 ENSGALP00000023281 ENSMUSP00000047123 ENSCBRP00000012429 YEBU_ECOLI Q9FG73) |
RNA binding motif protein 28 (Homo sapiens) | NP_060547 ENSPTRP00000033659 ENSDARP00000033858 SINFRUP00000132543 Q9W124 ENSANGP00000021189 Q96CV3 O74400 R05H10.2 ENSRNOP00000007777 ENSMUSP00000007993 NOP4_YEAST Q8CGC6 Q9SJT4 ENSDARP00000034794) |
Probable RNA-binding protein KIAA0117 (HAL845). (Homo sapiens) | P42696 Q8C5L7 F11A10.7 Q9LUK6 CG12288-PA ENSGALP00000023110 ENSPTRP00000003596 ENSRNOP00000034453 Q8LCE5 ENSCBRP00000008250 YDR6_SCHPO Q8MSG1 ENSANGP00000024370 ENSP00000345961 Q08208 SINFRUP00000146475 ENSDARP00000039403 ENSRNOP00000027145) |
Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrininteractor) (CAB) (p27(BBP)) (B(2)GCN homolog) (OK/SW-cl.27). (Homo sapiens) | P56537 ENSMUSP00000029142 SINFRUP00000146339 ENSRNOP00000010911 ENSANGP00000017466 IF6_MOUSE ENSDARP00000015326 Q9M060 IF6_YEAST C47B2.5 CG17611-PA IF6_SCHPO ENSGALP00000002796 ENSCBRP00000004717 Q9R071) |
Periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP9502). (Homo sapiens) | Q13610 PWP1_YEAST ENSGALP00000020588 Q8SY06 ENSDARP00000003237 Q93VS5 SINFRUP00000133614 ENSRNOP00000007549 ENSMUSP00000001836 Q9V5R0 Q9NAQ2 Q9D6T6 Q9P775 ENSANGP00000028823 ENSCBRP00000002874 Q9BV37) |
Ribosome biogenesis protein BOP1 (Block of proliferation 1 protein). (Homo sapiens) | Q14137 SINFRUP00000138968 CG5033-PA Y48B6A.1 YMT9_YEAST P97452 ENSPTRP00000035389 Q91X31 Q9SIY9 ENSANGP00000007563 ENSRNOP00000025133 ENSDARP00000011331 O74399 ENSMUSP00000023217 ENSPTRP00000035390) |
RRP5 protein homolog (Programmed cell death protein 11). (Homo sapiens) | Q14690 ENSDARP00000027151 ENSPTRP00000005127 CG5728-PA C16A3.3 RRP5_YEAST Q9WTU7 ENSCBRP00000008533 SINFRUP00000134892 ENSRNOP00000027512 ENSANGP00000011318 Q9LHM6 ENSMUSP00000006603 ENSP00000278073 ENSGALP00000013431 O74835 ENSMUSP00000066333 Q7TPE2 ENSRNOP00000027521) |
Suppressor of SWI4 1 homolog (Ssf-1) (Peter Pan homolog). (Homo sapiens) | Q9NQ55 PPAN_ARATH Q8BYM4 O44991 SSF1_YEAST SSF1_MOUSE SSF2_YEAST PPAN_DROME SINFRUP00000155722 ENSANGP00000012208 ENSDARP00000038241 ENSRNOP00000027974 ENSP00000340201 ENSPTRP00000017816 ENSCBRP00000007623 YDD3_SCHPO) |
Hypothetical protein FLJ10613. (Homo sapiens) | Q9NVN8 ENSDARP00000005405 Q8MT06 ENSMUSP00000026297 ENSP00000296301 ENSCBRP00000003206 ENSRNOP00000003397 YEJ6_YEAST SINFRUP00000164824 CG3983-PB O74791 K01C8.9 ENSPTRP00000037699 Q96SV6 ENSANGP00000012225 ENSPTRP00000025929 ENSMUSP00000047119 ENSGALP00000002453 ENSRNOP00000035860) |
ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD-box protein 18)(Myc-regulated DEAD-box protein) (MrDb). (Homo sapiens) | Q9NVP1 YAK2_SCHPO CG6375-PB SINFRUP00000136232 ENSMUSP00000001724 HAS1_YEAST ENSGALP00000019814 Q9LIH9 O61815 ENSRNOP00000038728 Q8BVZ2 Q9D2E0 ENSANGP00000013137 ENSCBRP00000013194 ENSPTRP00000021219 O49530) |
Chromatin-specific transcription elongation factor FACT 140 kDasubunit. (Homo sapiens) | Q9Y5B9 SINFRUP00000160699 CG1828-PA ENSANGP00000013171 ENSRNOP00000016288 Q86SB9 Q920B9 Q9N5R9 O94267 ENSCBRP00000013259 CC68_YEAST O82491 ENSMUSP00000042283 Q7YTY1 ENSPTRP00000010390) |
Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone binding protein)(p55). (Homo sapiens) | NP_009887 ENSCBRP00000003515 SINFRUP00000138309 PDA4_MOUSE ENSANGP00000026077 ENSRNOP00000008728 PDI2_CAEEL ENSDARP00000023877 PDI2_ARATH Q8BMT8 ENSGALP00000020268 PDI1_SCHPO ENSMUSP00000026935 ENSPTRP00000016636 ENSP00000344468 PDI_DROME ENSP00000327801) |
DNA repair | |
Protein description | Accessions |
DNA-repair protein XRCC1. (Homo sapiens) | P18887 ENSP00000262887 ENSDARP00000023168 ENSANGP00000010579 ENSPTRP00000019037 ENSGALP00000028134 XRC1_MOUSE Q9FT82 SINFRUP00000147372 Q7TNQ5 ENSRNOP00000027057) |
Bifunctional polynucleotide phosphatase/kinase (Polynucleotide kinase-3-phosphatase) (DNA 5-kinase/3-phosphatase) [Includes:Polynucleotide 3-phosphatase (EC 3.1.3.32) (2(3)-polynucleotidase) | Q9P1V2 PNK1_SCHPO F21D5.5 ENSDARP00000010492 Q9UNF8 ENSMUSP00000003044 CG9601-PA ENSPTRP00000019441 Q9JLV6 SINFRUP00000162379 ENSRNOP00000027531 Q9UKU8 Q8MZ20 ENSANGP00000009138 ENSCBRP00000011506) |
DNA polymerase beta (EC 2.7.7.7) (EC 4.2.99.-). (Homo sapiens) | NP_002681 DPOL_HUMAN ENSGALP00000005963 SINFRUP00000154971 Q9FNY4 ENSMUSP00000033938 ENSDARP00000017489 DPO4_YEAST ENSRNOP00000026039) |
DNA ligase III (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]). (Homo sapiens) | NP_039269 Q8MZC0 ENSDARP00000026523 DNL3_MOUSE CG17227-PA ENSRNOP00000030478 ENSGALP00000003593 ENSMUSP00000021039 ENSPTRP00000015364) |
Spliceosome | |
Protein description | Accessions |
LUC7-like 2 (Homo sapiens) | NP_057103 YP68_CAEEL ENSGALP00000019318 ENSRNOP00000008557 ENSANGP00000018276 ENSPTRP00000033841 Q9NQ29 ENSP00000293872 ENSCBRP00000012928 Q9VVI1 Q9USM4 ENSDARP00000014640 ENSMUSP00000050619 Q07508 Q9CWM1 Q940U9) |
PRP8 protein. (Homo sapiens) | O14547 C50C3.6 PRP8_YEAST Q9V664 ENSRNOP00000005016 ENSMUSP00000018449 SINFRUP00000144274 ENSPTRP00000014557 ENSDARP00000004036 ENSP00000304350 ENSGALP00000004642 O14187 ENSCBRP00000014703 Q9SSD2 ENSANGP00000005722 Q99PV0) |
U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDaprotein) (WD splicing factor Prp4) (hPrp4). (Homo sapiens) | O43172 Q93339 ENSCBRP00000013106 PRP4_YEAST Q7Y1Z3 ENSPTRP00000036339 Q9VVI0 ENSMUSP00000000472 ENSDARP00000003393 ENSANGP00000019389 ENSGALP00000014372 SINFRUP00000153743 PRP4_ARATH ENSRNOP00000019910 Q9UTC7 Q9DAW6 Q8BTJ0) |
U4/U6 small nuclear ribonucleoprotein Prp3 (Pre-mRNA splicing factor3) (U4/U6 snRNP 90 kDa protein) (hPrp3). (Homo sapiens) | O43395 Q21486 ENSDARP00000025313 Q8H0S1 ENSMUSP00000015892 PRP3_YEAST Q9C7E7 ENSANGP00000014537 Q9VW52 ENSRNOP00000037116 ENSGALP00000000633 ENSCBRP00000001720 SINFRUP00000139891 YAF2_SCHPO) |
Pleiotropic regulator 1. (Homo sapiens) | O43660 O55039 Q922V4 Q18295 ENSP00000303191 Q8LF96 CG1796-PA ENSPTRP00000028384 PR46_YEAST ENSANGP00000021697 SINFRUP00000138246 ENSRNOP00000009112 ENSGALP00000015050 ENSDARP00000030914 Q84WM8 PRL1_ARATH ENSCBRP00000005693 PRP5_SCHPO ENSDARP00000029654) |
Splicing factor 3B subunit 1 (Spliceosome associated protein 155) (SAP155) (SF3b155) (Pre-mRNA splicing factor SF3b 155 kDa subunit). (Homo sapiens) | O75533 CG2807-PA ENSDARP00000024961 ENSPTRP00000021823 T08A11.2 S3B1_MOUSE Q9FMF9 S3B1_YEAST ENSMUSP00000027127 SINFRUP00000130715 ENSP00000335321 S3B1_SCHPO ENSGALP00000013028 ENSANGP00000019328 ENSCBRP00000000863) |
U2 small nuclear ribonucleoprotein B". (Homo sapiens) | P08579 YIS9_YEAST ENSMUSP00000008477 Q21323 ENSGALP00000014190 ENSCBRP00000013609 O74968 ENSDARP00000035847 RU1A_HUMAN Q8RXP9 Q9LMJ0 ENSANGP00000019197 ENSPTRP00000022762 RU1A_DROME ENSRNOP00000006900 Q9CXX7 O13649 ENSCBRP00000013610 ENSMUSP00000064958) |
U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70)(U1-70K). (Homo sapiens) | P08621 O13829 ENSPTRP00000019340 ENSRNOP00000028176 ENSDARP00000019824 ENSCBRP00000014545 RU17_DROME Q09584 ENSMUSP00000003977 ENSANGP00000020311 RU17_ARATH RU17_YEAST SINFRUP00000131970 RU17_MOUSE ENSGALP00000005248 SINFRUP00000128038 ENSPTRP00000019342) |
U2 small nuclear ribonucleoprotein A (U2 snRNP-A). (Homo sapiens) | P09661 ENSMUSP00000032723 H20J04.8 RU2A_DROME SINFRUP00000144981 ENSANGP00000021562 ENSGALP00000011598 ENSDARP00000029347 ENSCBRP00000008744 RU2A_SCHPO Q08963 ENSRNOP00000016758 RU2A_ARATH ENSRNOP00000029202) |
Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1)(Sm-D autoantigen). (Homo sapiens) | P13641 ENSP00000300413 ENSANGP00000009562 SINFRUP00000163293 SMD1_DROME Q7Z5A3 SMD1_CAEEL ENSMUSP00000002551 ENSGALP00000019299 ENSCBRP00000007490 SMD1_SCHPO SMD1_YEAST Q9SSF1 ENSDARP00000027770 Q9SY09) |
Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2). (Homo sapiens) | P43330 ENSANGP00000002741 C52E4.3 ENSRNOP00000021221 SINFRUP00000157552 Q8RUH0 CG1249-PA ENSCBRP00000011457 SMD2_YEAST SMD2_SCHPO ENSMUSP00000044084 ENSDARP00000016366 ENSRNOP00000003051) |
Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3). (Homo sapiens) | P43331 CG8427-PA SMD3_CAEEL SMD3_YEAST ENSCBRP00000001954 SMD3_SCHPO Q9S7E6 Q91VM2 ENSRNOP00000018493 ENSDARP00000011550 ENSANGP00000011800 SINFRUP00000141225 Q8LC48 ENSDARP00000011226 ENSRNOP00000023316) |
Splicing factor 3A subunit 3 (Spliceosome associated protein 61) (SAP61) (SF3a60). (Homo sapiens) | Q12874 ENSMUSP00000030734 NOI_DROME ENSGALP00000002338 ENSCBRP00000010573 Q22469 ENSANGP00000020368 SINFRUP00000145351 Q9FG01 PRP9_YEAST O59706 ENSDARP00000020479) |
Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit). (Homo sapiens) | Q13435 Q8H0V8 ENSMUSP00000025774 W03F9.10 Q7Z627 CG3605-PA ENSRNOP00000027668 ENSPTRP00000006745 Q9UUI3 ENSP00000318861 Q9BWD2 CUS1_YEAST ENSANGP00000020597 Q80W39 SINFRUP00000168009 Q7Z3K9 ENSCBRP00000010950 ENSDARP00000007002 Q9SVT1) |
Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F)(SmF). (Homo sapiens) | Q15356 RUXF_ARATH ENSMUSP00000020203 RUXF_DROME SINFRUP00000129927 ENSPTRP00000009036 RUXF_SCHPO RUXF_YEAST RUXF_CAEEL ENSP00000266735 ENSANGP00000002801 ENSGALP00000018594 ENSMUSP00000061142) |
Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G)(SmG). (Homo sapiens) | Q15357 RUXG_CAEEL RUXG_YEAST Q9CAX7 RUXG_SCHPO RUXG_ARATH RUXG_DROME SINFRUP00000154208 ENSANGP00000010868 ENSRNOP00000030367 ENSCBRP00000010088) |
Splicing factor 3B subunit 3 (Spliceosome associated protein 130) (SAP130) (SF3b130) (Pre-mRNA splicing factor SF3b 130 kDa subunit)(STAF130). (Homo sapiens) | Q15393 O44985 ENSGALP00000003979 SINFRUP00000148066 ENSCBRP00000013718 Q9W0M7 Q9UTT2 ENSANGP00000017759 ENSDARP00000018100 ENSP00000305790 ENSMUSP00000045073 Q9LD60 ENSRNOP00000023854 YME9_YEAST ENSPTRP00000014195) |
S.cerevisiae chromosome XV reading frame ORF YOR308c (Orf 05667protein). (Saccharomyces cerevisiae) | NP_014953 ENSRNOP00000027812 O94538 ENSP00000310448 SINFRUP00000160416 Q8K155 Q9R270 ENSMUSP00000047397 Q9Z315 ENSDARP00000002453 ENSANGP00000002211) |
HT004 protein. (Homo sapiens) | NP_012617 Q9VTL1 YE18_SCHPO Q9HBZ7 ENSPTRP00000010291 C27F2.10 Q8BNM3 ENSMUSP00000039060 Q9NWH3 ENSGALP00000027121 SINFRUP00000133504 Q9NW44 Q8BFV2 ENSRNOP00000034133 Q8C951 Q8GWE6 Q9NVY1 Q9NUK6 ENSANGP00000019270 ENSCBRP00000001736) |
Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP114) (SF3a120). (Homo sapiens) | NP_012332 Q8K4Z5 ENSGALP00000012879 Q9VEP9 SINFRUP00000172050 ENSANGP00000028478 S3A1_HUMAN Q8C128 ENSDARP00000029869 Q9MA20 Q10577 Q8C0M7 ENSPTRP00000024526 O13900 ENSCBRP00000012428 Q8C175 ENSRNOP00000008355 Q8RXF1) |
Cdc5 (Fragment). (Homo sapiens) | NP_013940 P92948 Q99459 CC5_SCHPO ENSDARP00000026727 Q9W0R0 Q99974 ENSANGP00000011065 Q21119 O04498 ENSCBRP00000014309 SINFRUP00000150402 ENSGALP00000026906 ENSPTRP00000031145 Q8K1J9 ENSMUSP00000024727 ENSRNOP00000027264) |
CD2 antigen cytoplasmic tail-binding protein 2 (CD2 cytoplasmic domainbinding protein) (CD2 tail binding protein). (Homo sapiens) | NP_012026 LIN1_SCHPO ENSDARP00000032464 C2B2_HUMAN ENSRNOP00000023285 CG5198-PA SINFRUP00000135471) |
Ribosome biogenesis (90S) | |
Protein description | Accessions |
Ded protein (Apoptosis antagonizing transcription factor). (Homo sapiens) | ENSP00000225402 Q9US05 Q9VM95 ENSANGP00000017925 Q06631 SINFRUP00000141124 Q9JKX4 ENSPTRP00000015430 ENSRNOP00000000258 Y73E7A.2 ENSP00000225402 ENSDARP00000031013 Q9FLK0 ENSGALP00000008693 Q84W09 Q9UNX5 ENSCBRP00000004284) |
Hypothetical protein FLJ14893. (Homo sapiens) | ENSP00000297579 ENSCBRP00000008731 O74340 SINFRUP00000130756 Q93VK1 Q8NCH8 Q8TC51 ZK430.7 ENSDARP00000028109 SOF1_YEAST ENSMUSP00000022909 Q8W4D9 ENSGALP00000025851 ENSPTRP00000035044 ENSRNOP00000005803 ENSANGP00000001367 Q9VUN7 ENSP00000297579) |
Dyskerin (Nucleolar protein NAP57) (CBF5 homolog). (Homo sapiens) | NP_001354 SINFRUP00000140014 ENSGALP00000008091 CBF5_YEAST ENSMUSP00000033776 NO50_CAEEL NO60_DROME Q9UAN8 ENSPTRP00000038695 ENSDARP00000007628 Q9LD90 ENSCBRP00000001630 ENSP00000253127 CBF5_SCHPO ENSANGP00000017710 Q9ESX5 TRUB_ECOLI) |
Fibrillarin (34 kDa nucleolar scleroderma antigen). (Homo sapiens) | NP_001427 Q9SZZ1 ENSRNOP00000026021 SINFRUP00000133777 Q99L58 CG9888-PA ENSCBRP00000011396 T01C3.7 ENSDARP00000023991 Q94AH9 Q8IGK5 FBRL_SCHPO FBRL_YEAST ENSANGP00000015622 FBRL_MOUSE) |
U3 small nucleolar RNA interacting protein 2 (U3 small nucleolarribonucleoproptein-associated 55-kDa protein) (U3 snoRNP-associated55-kDa protein) (U3-55K). (Homo sapiens) | NP_004695 ENSRNOP00000017469 SINFRUP00000149309 Q8IU12 Q9M0V4 ENSMUSP00000038580 T02H6.1a ENSPTRP00000025858 Q06506 Q9V767 YKU5_SCHPO ENSDARP00000018875 ENSANGP00000021079 ENSGALP00000002168) |
nucleolar protein 5A (Homo sapiens) | NP_006383 ENSPTRP00000022562 Q8IGT5 Q9SGT7 K07C5.4 NO56_MOUSE CG13849-PA ENSRNOP00000009563 ENSDARP00000018149 ENSP00000343111 SINFRUP00000151001 ENSMUSP00000028890 ENSCBRP00000005906 SIK1_YEAST O94514 ENSANGP00000019928 Q9LTV0) |
Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120). (Homo sapiens) | NP_057018 ENSCBRP00000004449 Q9P7S7 NOP5_YEAST Q9VM69 Q9MAB3 SINFRUP00000153775 Q8C8Y7 ENSMUSP00000027174 ENSPTRP00000021909 W01B11.3 ENSANGP00000019413 ENSRNOP00000022676 ENSDARP00000023410 ENSGALP00000013761) |
CGI-94 protein (Homo sapiens) | NP_057121 ENSDARP00000019645 UT11_CAEEL ENSMUSP00000030738 ENSGALP00000002279 CG1789-PA UT11_YEAST ENSPTRP00000000982 SINFRUP00000153381 ENSRNOP00000009882 ENSCBRP00000000788 ENSANGP00000013368 UT11_ARATH UT11_SCHPO) |
Nucleolar RNA-associated protein alpha (OTTHUMP00000063292). (Homo sapiens) | NP_075068 ENSDARP00000037424 ENSPTRP00000035676 SINFRUP00000154211 Q95XY4 ENSMUSP00000030138 YG2L_YEAST ENSRNOP00000014211 ENSGALP00000022874 Q9VEX3 ENSANGP00000014202 Q9CAJ5 O94676 Q8IH00) |
Src-associated protein SAW (Homo sapiens) | NP_115551 ENSP00000296792 ENSRNOP00000022259 ENSPTRP00000029086 Q9N477 Q8TED0 ENSMUSP00000048204 ENSGALP00000021963 O94365 ENSDARP00000011720 O46069 SINFRUP00000149253 O82266 YMY3_YEAST Q9W4Z9 ENSANGP00000007783 ENSCBRP00000009953 Q8GXN5) |
U3 small nucleolar ribonucleoprotein protein MPP10 (M phasephosphoprotein 10). (Homo sapiens) | O00566 Q9FJY5 ENSGALP00000006196 Q810V0 ENSCBRP00000008861 SINFRUP00000151377 ENSRNOP00000037243 YDW3_SCHPO ENSDARP00000025759 Q9XW58 ENSDARP00000017451 MP10_YEAST Q9VLK1 ENSMUSP00000035349 ENSANGP00000013883 ENSPTRP00000020671) |
Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome subunit RC6-1) (Proteasome subunit XAPC7). (Homo sapiens) | O14818 ENSRNOP00000011724 C36B1.4 PSA7_MOUSE PS71_DROME PSA7_SCHPO ENSMUSP00000029082 ENSANGP00000007022 ENSPTRP00000023571 Q8LB36 ENSGALP00000008224 PSA7_YEAST ENSCBRP00000013102 SINFRUP00000130771 PS71_ARATH ENSDARP00000028553 PS72_ARATH) |
WD-repeat protein BING4. (Homo sapiens) | O15213 BIN4_MOUSE SINFRUP00000132244 ENSPTRP00000030811 ENSRNOP00000000552 ENSANGP00000012832 YER2_YEAST CG2260-PA ENSCBRP00000007088 ENSDARP00000009916 Q9CAF0 Q19873 Q9P4X3) |
PBK1 protein. (Homo sapiens) | O76021 SINFRUP00000160089 ENSDARP00000025660 ENSMUSP00000005999 Q8WUZ1 ENSP00000307204 Q8T9F1 Q8K235 ENSRNOP00000036822 ENSANGP00000015972 YK40_YEAST Q20720 ENSPTRP00000013269 Q8IWS7 Q9LXT5 Q9UT32 Q9VLK2 ENSCBRP00000013813 ENSGALP00000004521) |
60S acidic ribosomal protein P2. (Homo sapiens) | P05387 Q9CQ99 ENSMUSP00000062852 C37A2.7 Q9LXM8 RLA4_YEAST ENSGALP00000023089 RA2A_ARATH RLA2_SCHPO ENSCBRP00000005645 ENSDARP00000022552 Q8MRV1 ENSRNOP00000011879 RA2B_ARATH Q8LB03 ENSANGP00000025118 RLA2_DROME SINFRUP00000143489 ENSRNOP00000003440 ENSCBRP00000013710 RLA2_MOUSE) |
Probable ATP-dependent RNA helicase DDX10 (DEAD-box protein 10). (Homo sapiens) | Q13206 ENSCBRP00000009948 ENSP00000314348 ENSRNOP00000017683 Q9VX34 DBP4_YEAST ENSPTRP00000007323 Q80Y44 ENSMUSP00000065198 ENSDARP00000037495 SINFRUP00000144154 ENSGALP00000027655 Y23H5B.6 Q9UTP9 Q9FFT9) |
Bystin. (Homo sapiens) | Q13895 YMG5_CAEEL BYS_DROME ENSGALP00000005482 ENSPTRP00000031035 Q86W44 Q9C6V6 SINFRUP00000136856 ENSANGP00000010976 ENSCBRP00000014637 Q8RWS4 ENP1_YEAST YBB9_SCHPO ENSDARP00000001346 BYST_MOUSE ENSMUSP00000024783) |
Ribosome biogenesis protein BMS1 homolog. (Homo sapiens) | Q14692 ENSMUSP00000032237 Q9N306 ENSDARP00000003761 ENSGALP00000004124 BMS1_YEAST BMS1_SCHPO Q9M9Y0 SINFRUP00000170055 ENSANGP00000004512 ENSCBRP00000000583 Q86XJ9 ENSRNOP00000008741 Q9VVC9 ENSPTRP00000004576) |
Periodic tryptophan protein 2 homolog. (Homo sapiens) | Q15269 ENSP00000291576 SINFRUP00000148665 PWP2_CAEEL ENSDARP00000036854 Q8VYZ5 Q9V5Q5 PWP2_MOUSE ENSCBRP00000004465 PWP2_YEAST PWP2_SCHPO ENSPTRP00000024042 ENSGALP00000017897 ENSRNOP00000001605 ENSANGP00000016784 ENSMUSP00000045812 Q8R538) |
Hypothetical protein FLJ12519 (Hypothetical proteinDKFZp781N1244). (Homo sapiens) | Q8IWA0 ENSPTRP00000021761 ENSDARP00000000678 ENSANGP00000009951 Q9VIG1 Q9LIM7 Q9H9V8 ENSMUSP00000027139 ENSRNOP00000005134 Q95RG7 ENSGALP00000003872 Q9H9U5 O13878 Q9H8U8 Q02931 Q9CRF5 SINFRUP00000129886) |
Probable ATP-dependent helicase DHX37 (DEAH-box protein 37). (Homo sapiens) | Q8IY37 ENSMUSP00000031443 ENSCBRP00000009569 Q9NFN0 Q9C873 ENSRNOP00000038631 YKQ0_CAEEL YK16_SCHPO SINFRUP00000154962 ENSPTRP00000009558 KZ_DROME ENSGALP00000004679 ENSDARP00000038203 DHR1_YEAST Q9C813 ENSANGP00000010281) |
Cirhin. (Homo sapiens) | Q8NCD9 ENSPTRP00000014129 K05C4.5 Q9VUZ6 Q06679 Q8NCD9 ENSMUSP00000048377 O60161 Q8T021 Q8RXU6 ENSDARP00000003198 ENSRNOP00000027553 ENSANGP00000020357 SINFRUP00000144899 Q96SP0 ENSGALP00000000908) |
WD-repeat protein 36 (T-cell activation WD repeat protein) (TA-WDRP). (Homo sapiens) | Q8NI36 ENSANGP00000012199 CG9799-PA Q8BHI6 Q8N1Q2 Y45F10D.7 ENSRNOP00000036935 ENSDARP00000008668 SINFRUP00000169604 YL09_YEAST Q93YS7 Q960D6 Q9ZPH3 ENSCBRP00000004939 ENSPTRP00000029316 ENSGALP00000000325 YC47_SCHPO ENSP00000319771) |
Probable ribosome biogenesis protein NEP1 (C2f protein). (Homo sapiens) | Q92979 NEP1_MOUSE SINFRUP00000156102 ENSRNOP00000017334 Y39A1A.14 ENSDARP00000026873 NEP1_DROME ENSMUSP00000004379 NEP1_HUMAN ENSANGP00000016225 ENSP00000261406 ENSGALP00000023447 MRA1_SCHPO NEP1_YEAST ENSPTRP00000007864 Q9M1J8 ENSCBRP00000001610 Q8LA80) |
TBL3 protein (Transducin beta-like 3). (Homo sapiens) | Q96A78 SINFRUP00000141141 ENSPTRP00000013020 ENSP00000331815 ENSGALP00000008904 O18215 Q9V5C7 ENSMUSP00000046830 Q9LFE2 ENSRNOP00000018405 Q8VE90 ENSCBRP00000002060 Q05946 Q8IVB7 Q9USN3 ENSANGP00000020999 ENSDARP00000013491) |
HIV-1 Rev binding protein 2 (Rev interacting protein 1) (Rip-1). (Homo sapiens) | Q96AT5 Q9VPU8 ENSGALP00000016606 Q9FT93 ENSANGP00000010161 SINFRUP00000159645 Q8NEA8 ENSCBRP00000013899 Q96AT5 O16311 ENSDARP00000020316 Q8TC37 ENSRNOP00000005384 MIS3_SCHPO ENSMUSP00000063671 YCF9_YEAST ENSPTRP00000008898 Q8LBT7 ENSMUSP00000020427 Q8C029) |
U3 snoRNP protein 4 homolog. (Homo sapiens) | Q96G21 Q9S826 ENSCBRP00000009371 ZK795.3 ENSPTRP00000021316 Q8CI42 Q95SD3 YEE7_SCHPO ENSMUSP00000027303 Q9VBY2 ENSDARP00000003916 SINFRUP00000129804 IMP4_YEAST ENSP00000259239 ENSANGP00000017149 Q9CYT5) |
FLJ14075 protein. (Homo sapiens) | Q9BSC4 ENSDARP00000018924 ENSGALP00000026477 ENSMUSP00000035930 CG7516-PA SINFRUP00000169293 O74879 Q19974 ENSCBRP00000009000 ENSRNOP00000007169 Q9M1J9 ENSANGP00000010438 YG3J_YEAST) |
Hypothetical protein MGC3162. (Homo sapiens) | Q9BVI4 CG2875-PA Q8BHY2 YO93_CAEEL Q8R1F7 ENSCBRP00000008894 Q8VZE1 ENSPTRP00000009609 ENSDARP00000018805 ENSANGP00000020149 Q06512 ENSRNOP00000000851 ENSGALP00000003557 O94372) |
UPF0202 protein KIAA1709. (Homo sapiens) | Q9H0A0 ENSANGP00000020571 YIL8_CAEEL ENSMUSP00000028608 ENSP00000257829 ENSDARP00000013203 YNN2_YEAST U202_ARATH ENSPTRP00000006068 ENSGALP00000023454 U202_DROME ENSCBRP00000013215 YDK9_SCHPO SINFRUP00000132400 ENSRNOP00000012094 Q8BW78) |
Hypothetical protein C20orf6. (Homo sapiens) | Q9H501 ENSRNOP00000006333 ENSMUSP00000036523 O74828 ENSCBRP00000008405 ENSANGP00000027260 ENSANGP00000002042 ENSGALP00000014154 CG11417-PA Q8MR29 Q9MAC6 F58B3.4 ENSDARP00000002284 Q7TMM5 Q20969 SINFRUP00000143493 ENSPTRP00000022741 Q06344 ENSRNOP00000037915) |
Protein BAP28. (Homo sapiens) | Q9H583 ENSCBRP00000008732 CG10805-PA BP28_ARATH Q8BLJ4 ENSDARP00000026134 ENSRNOP00000034550 BP28_CAEEL ENSANGP00000017181 SINFRUP00000148797 ENSGALP00000000336 ENSP00000264173 ENSMUSP00000054084 YJK9_YEAST YG44_SCHPO ENSPTRP00000003615 ENSRNOP00000024249 ENSDARP00000001839 ENSMUSP00000038523) |
U3 small nucleolar ribonucleoprotein protein IMP3 homolog (BRMS2). (Homo sapiens) | Q9NV31 C48B6.2 ENSRNOP00000023456 CG4866-PA IMP3_YEAST SINFRUP00000160797 ENSMUSP00000034827 ENSANGP00000013047 Q8LCM3 O13835 ENSGALP00000026920) |
Hypothetical protein FLJ10432. (Homo sapiens) | Q9NVY6 DBP8_YEAST Q9N5M1 DB45_DROME Q9SA27) |
Basal transcriptional activator hABT1 (Activator of basaltranscription 1). (Homo sapiens) | Q9ULW3 F57B10.8 ENSPTRP00000030427 Q9QYL7 O74362 Q9D762 CG32708-PA Q9LXY9 ENSRNOP00000023648 YN8V_YEAST ENSANGP00000028494) |
WD-repeat protein 3. (Homo sapiens) | Q9UNX4 CG8064-PA SINFRUP00000137115 Q9LVF2 DIP2_YEAST F13H8.2 Q8BHB4 ENSRNOP00000026726 ENSANGP00000012023 ENSDARP00000023281 ENSPTRP00000001996 ENSCBRP00000007531 ENSGALP00000023834 YB1C_SCHPO) |
DEAD-box protein 52 (EC 3.6.1.-) (Putative ATP-dependent RNA helicaseROK1-like) (HUSSY-19). (Homo sapiens) | Q9Y2R4 DX52_MOUSE ENSANGP00000011621 SINFRUP00000128019 CG5589-PA ENSRNOP00000003600 ENSMUSP00000048802 ENSGALP00000008800 Q9SF31 ENSCBRP00000014320 Q21736 ENSP00000268854 ENSPTRP00000015441 YA88_SCHPO ROK1_YEAST) |
WD-repeat protein CGI-48. (Homo sapiens) | Q9Y5J1 ENSP00000225298 Q8BHW1 B0280.9 CG7989-PA SINFRUP00000140975 CG48_SCHPO ENSCBRP00000014554 ENSGALP00000004714 CG48_ARATH ENSRNOP00000003582 ENSPTRP00000016003 CG48_YEAST ENSANGP00000005197 Q8LAL9 ENSMUSP00000068103) |
Probable nucleolar complex protein 14. (Homo sapiens) | NP_010133 ENSCBRP00000004362 ENSMUSP00000038382 CG5824-PA ENSPTRP00000027308 ENSANGP00000022002 Q8R3N1 O43051 ENSRNOP00000016347 Y48G1A.4 P78316 ENSGALP00000025188 SINFRUP00000132059 Q9LQB3) |
Nucleosome binding complex | |
Protein description | Accessions |
Replication factor C large subunit. (Homo sapiens) | P35251 ENSANGP00000020306 ENSGALP00000023075 Q9C587 CG1119-PA ENSDARP00000003895 ENSRNOP00000003907 RFC1_YEAST ENSCBRP00000010469 ENSMUSP00000031092 ENSPTRP00000027524 SINFRUP00000142414 RFC1_SCHPO C54G10.2 Q8MR76 RFC1_HUMAN RFC1_MOUSE) |
Activator 1 38 kDa subunit (Replication factor C 38 kDa subunit) (A138 kDa subunit) (RF-C 38 kDa subunit) (RFC38) (Replication factor Csubunit 3). (Homo sapiens) | P40938 ENSANGP00000019592 Q8VXX4 ENSCBRP00000002902 RFC3_MOUSE RFC5_SCHPO ENSRNOP00000001444 Q18547 SINFRUP00000170318 ENSPTRP00000009832 CG6258-PA ENSGALP00000027512 RFC5_YEAST ENSDARP00000027633) |
Structural maintenance of chromosome 3 (Chondroitin sulfateproteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan)(Basement membrane-associated chondroitin proteoglycan). (Homo sapiens) | Q9UQE7 SMC3_MOUSE ENSRNOP00000019560 ENSCBRP00000001119 SINFRUP00000127255 Q86VX4 Q9U2C1 SMC3_SCHPO ENSGALP00000013963 ENSMUSP00000025930 Q24098 Q9VXE9 ENSANGP00000020478 SMC3_YEAST Q8H2D2 ENSDARP00000024411) |
Double-strand-break repair protein rad21 homolog (hHR21) (Nuclearmatrix protein 1) (NXP-1) (SCC1 homolog). (Homo sapiens) | NP_006256 CG40222-PA ENSANGP00000003994 SCC1_YEAST ENSDARP00000009867 RA21_MOUSE ENSGALP00000025921 Q21306 Q810A8 Q9U6D9 Q8W1Y0 ENSCBRP00000014647 RA21_SCHPO ENSRNOP00000006209 Q9UB09 SC12_ARATH SINFRUP00000136090 ENSMUSP00000022927 SC13_ARATH ENSMUSP00000036780 ENSCBRP00000007678 SINFRUP00000162508 ENSRNOP00000012752) |
Complex 1 with undetermined function | |
Protein description | Accessions |
DNA-directed RNA polymerase I 40 kDa polypeptide (EC 2.7.7.6) (RPA40)(RPA39). (Homo sapiens) | O15160 RPC5_SCHPO ENSDARP00000008619 ENSCBRP00000002513 Q39216 Q9UAY9 ENSGALP00000016829 ENSANGP00000012965 ENSRNOP00000025787 Q9VMX3 RPA5_MOUSE ENSMUSP00000004265 SINFRUP00000177234 RPC5_YEAST ENSPTRP00000031106 Q8LD68 Q39215 Q9C6C2) |
Pyruvate dehydrogenase E1 component beta subunit, mitochondrialprecursor (EC 1.2.4.1) (PDHE1-B). (Homo sapiens) | P11177 O44451 ENSPTRP00000026010 ODPB_YEAST ENSCBRP00000000190 Q8IGJ4 ENSGALP00000011491 ENSMUSP00000022268 Q9VAP7 SINFRUP00000157804 ENSRNOP00000010545 ENSDARP00000002122 ODPB_SCHPO ODPB_ARATH ENSANGP00000010075 DXS_ECOLI) |
DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide(EC 2.7.7.6) (ABC10-alpha) (RPB7.0) (RPB10alpha) (RPABC4). (Homo sapiens) | P53803 F23B2.13 Q9FLM8 RPCX_YEAST RPCX_MOUSE ENSMUSP00000051968 ENSGALP00000025781 RPCX_SCHPO ENSRNOP00000028598 ENSCBRP00000004642 ENSANGP00000014480 ENSMUSP00000060243 Q9D2S5) |
Hypothetical protein FLJ36560. (Homo sapiens) | Q8N9T8 ENSDARP00000013972 Q9LIQ0 ENSCBRP00000003091 YAA5_SCHPO F54C9.9 SINFRUP00000167705 ENSANGP00000009538 YN48_YEAST ENSPTRP00000017856 Q9VTU0 Q8VDQ9 ENSMUSP00000039688 ENSP00000320917) |
Hypothetical protein FLJ20479 (Small nucleolar RNA binding-likeprotein NHP2) (Nucleolar protein family A, member 2) (NOLA2protein). (Homo sapiens) | Q9NX24 ENSDARP00000005113 SINFRUP00000153223 ENSANGP00000009119 NHP2_SCHPO Q9LEY9 Q9V3U2 ENSMUSP00000001083 ENSRNOP00000005688 Q9XXD4 NHP2_YEAST ENSCBRP00000001703) |
hypothetical protein DKFZp566D143.1 (Homo sapiens) | NP_014041 Q8BQY9 Q9UG11 Q8MSZ6) |
Complex 2 with undetermined function | |
Protein description | Accessions |
Surfeit locus protein 6. (Homo sapiens) | NP_006744 ZK546.14a ENSMUSP00000048457 ENSRNOP00000006699 CG4510-PA ENSANGP00000017644 Q9FLD3 O43082 ENSGALP00000005076 ENSPTRP00000036818 YKI2_YEAST SINFRUP00000158534 ENSCBRP00000006720 ENSDARP00000016371) |
Ribosome biogenesis protein Brix. (Homo sapiens) | NP_060791 ENSCBRP00000008813 YM63_CAEEL ENSGALP00000005322 BRIX_DROME BRX1_YEAST SINFRUP00000160488 CG32253-PA ENSPTRP00000028782 ENSMUSP00000022855 Q9C928 ENSDARP00000029422 ENSRNOP00000024285 BRX1_SCHPO ENSANGP00000021112 Q93Z54 Q9LE16) |
Heterogeneous nuclear ribonucleoprotein R (hnRNP R). (Homo sapiens) | O43390 ENSMUSP00000048236 ENSRNOP00000016001 NOP3_YEAST ENSGALP00000001183 F58D5.1 Q9BV64 ENSCBRP00000011315 SINFRUP00000160913 O23093 ENSP00000326043 ENSANGP00000023687 ENSPTRP00000004323 Q95TW4 CG17838-PD Q8LEV4 GRP7_ARATH) |
39S ribosomal protein L12, mitochondrial precursor (L12mt) (MRP-L12)(5c5-2). (Homo sapiens) | P52815 ENSCBRP00000001622 O18180 ENSRNOP00000012572 ENSMUSP00000044417 O04527 CG5012-PA YGG8_YEAST ENSGALP00000011640 Q9USJ9 ENSPTRP00000016631 ENSANGP00000015113 SINFRUP00000135573 RL7_ECOLI O23238) |
Protein KIAA0020. (Homo sapiens) | Q15397 ENSP00000265774 ZK945.3 ENSMUSP00000041216 ENSDARP00000007630 ENSCBRP00000009439 CG1685-PA ENSANGP00000013373 Q9LRZ3 PUF6_YEAST ENSRNOP00000016853 ENSPTRP00000035473 Q9UU76 ENSGALP00000016527 SINFRUP00000155594) |
UPF0120 protein DKFZp564C186. (Homo sapiens) | Q9Y3T9 YU20_MOUSE ENSMUSP00000030960 C07E3.2 CG9246-PA Q9P7G0 ENSPTRP00000021314 ENSDARP00000005880 ENSGALP00000003474 SINFRUP00000134605 YO26_YEAST ENSCBRP00000007398 ENSRNOP00000035900 YU20_ARATH ENSP00000341800) |
Exosome | |
Protein description | Accessions |
autoantigen (Homo sapiens) | NP_005024 Q9LDM2 ENSDARP00000005262 RR45_YEAST ENSGALP00000019364 RR45_SCHPO SINFRUP00000140635 ENSCBRP00000014682 ENSMUSP00000029269 ENSPTRP00000028180 CG9606-PA F37C12.13a Q8LGD7 ENSANGP00000015425 ENSRNOP00000020662) |
homolog of yeast mRNA transport regulator 3 (Homo sapiens) | NP_478126 ENSANGP00000026025 Q9P7R3 ENSDARP00000010113 ENSPTRP00000014169 ENSRNOP00000025179) |
Polymyositis/scleroderma autoantigen 2 (Exosome component 10)(Autoantigen PM/Scl 2) (Polymyositis/scleroderma autoantigen 100 kDa)(PM/Scl-100) (P100 polymyositis-scleroderma overlap syndromeassociated autoantigen). (Homo sapiens) | Q01780 ENSANGP00000020658 C14A4.4a YD81_SCHPO CG7292-PA ENSRNOP00000014629 ENSGALP00000004870 ENSDARP00000018307 SINFRUP00000133183 ENSCBRP00000007007 PMC2_MOUSE Q9FFL2 ENSPTRP00000000277 ENSMUSP00000017408 Q8R2R0 RRP6_YEAST RND_ECOLI Q8K366) |
Exosome complex exonuclease RRP4 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 4) (Exosome component 2). (Homo sapiens) | Q13868 ENSMUSP00000043519 RRP4_SCHPO CG3931-PA ENSDARP00000028443 SINFRUP00000155889 RRP4_YEAST ENSCBRP00000004752 ENSANGP00000011203 Q9ZVT7 ENSRNOP00000012311 Q95XD0 Q8MSZ7 ENSPTRP00000036747 ENSGALP00000006174) |
Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 42) (Exosome component 7) (p8). (Homo sapiens) | Q15024 ENSCBRP00000005390 Q9V7H9 ENSDARP00000004743 F31D4.1 Q9SSE1 Q7TMX6 ENSP00000265564 ENSMUSP00000026891 Q9SFD4 ENSGALP00000019366 ENSRNOP00000005975 SINFRUP00000158981 ENSANGP00000023686 ENSPTRP00000025571) |
KIAA1008. (Homo sapiens) | Q7Z481 Q9SHL7 ENSGALP00000027317 ENSMUSP00000041906 ENSPTRP00000010072 Q9VC93 SINFRUP00000166614 ENSRNOP00000029411 Q8C074 RR44_CAEEL ENSCBRP00000009378 Q9BI20 Q960A7 ENSDARP00000014372 RR44_YEAST DIS3_SCHPO ENSANGP00000003705 ENSP00000304580 RNR_ECOLI) |
Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 43) (Exosome component 8) (p9) (Opa-interactingprotein 2). (Homo sapiens) | Q96B26 ENSGALP00000027492 ENSRNOP00000017993 RR43_MOUSE Q9ZUI4 ENSANGP00000011759 ENSP00000239893 SINFRUP00000138924 ENSPTRP00000009857 RR43_SCHPO ENSMUSP00000029316) |
Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 41) (Exosome component 4) (p12A). (Homo sapiens) | Q9NPD3 ENSRNOP00000016464 SINFRUP00000140794 ENSANGP00000009222 Q9SP08 RR41_SCHPO Q8SYC8 ENSPTRP00000035368 B0564.1 CG15481-PA ENSANGP00000017010 RR41_MOUSE RR41_YEAST ENSCBRP00000002894 ENSP00000315476 ENSMUSP00000050940 RR41_HUMAN RNPH_ECOLI) |
Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 46) (Exosome component 5) (p12B) (Chronicmyelogenous leukemia tumor antigen 28). (Homo sapiens) | Q9NQT4 ENSRNOP00000028026 Q9LX74 CG4043-PA C14A4.5 RR46_YEAST RR46_MOUSE ENSDARP00000016827 ENSP00000221233 ENSCBRP00000007008 Q95TW1 RR46_SCHPO SINFRUP00000156655 ENSANGP00000019439) |
Exosome complex exonuclease RRP40 (EC 3.1.13.-) (Ribosomal RNAprocessing protein 40) (Exosome component 3) (p10) (CGI-102). (Homo sapiens) | Q9NQT5 ENSMUSP00000030003 Q7TQK4 Q94AW9 RR40_YEAST ENSPTRP00000035836 Q8IPX7 O13903 ENSANGP00000025378 ENSGALP00000003808 ENSRNOP00000016582 Q93830 ENSCBRP00000004957) |
3-5 exoribonuclease CSL4 homolog (EC 3.1.13.-) (Exosome component 1)(CGI-108). (Homo sapiens) | Q9Y3B2 ENSCBRP00000001705 ENSANGP00000006954 CSL4_MOUSE Q9VKJ4 SINFRUP00000143403 Q9FMB3 ENSDARP00000014286 CSL4_SCHPO Q9XXD2 ENSMUSP00000044750) |
Origin-recognition complex | |
Protein description | Accessions |
DNA replication licensing factor MCM7 (CDC47 homolog) (P1.1-MCM3). (Homo sapiens) | P33993 ENSMUSP00000000505 ENSCBRP00000004862 ENSRNOP00000001825 SINFRUP00000141217 CG4978-PA MCM7_SCHPO ENSANGP00000010410 ENSPTRP00000033323 F32D1.10 PROL_ARATH ENSDARP00000038907 CC47_YEAST P91674 NP_032592) |
DNA replication licensing factor MCM2 (Minichromosome maintenanceprotein 2 homolog) (Nuclear protein BM28). (Homo sapiens) | P49736 Q9XXI9 ENSGALP00000009709 MCM2_SCHPO ENSCBRP00000000992 MCM2_DROME MCM2_HUMAN SINFRUP00000163970 ENSMUSP00000061923 MCM2_YEAST ENSPTRP00000021381 Q8C2R0 ENSANGP00000013357 ENSDARP00000029164 MCM2_MOUSE Q9LPD9 ENSRNOP00000022231 O08971) |
SMARCA complex | |
Protein description | Accessions |
SWI/SNF related matrix associated actin dependent regulator ofchromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrosenonfermenting protein 2 homolog) (hSNF2H). (Homo sapiens) | O60264 Q8RWY3 SN2L_CAEEL ENSMUSP00000044361 ENSANGP00000016886 Q7Z397 ENSP00000345346 Q9SQU3 Q91ZW3 HEPA_ECOLI ENSPTRP00000028278 Q9NRZ9 Q08773 Q8SX14 SINFRUP00000151709 ENSCBRP00000014569 ISWI_DROME ENSGALP00000016102 ENSRNOP00000024568 ENSDARP00000013356 ENSMUSP00000025965) |
SMARCA4 isoform 2. (Homo sapiens) | Q9HBD4 ENSP00000265773 SNF2_YEAST ENSPTRP00000017881 Q9SFG5 SINFRUP00000139269 SN22_HUMAN ENSRNOP00000013166 ENSGALP00000016509 BRM_DROME YLR1_SCHPO SN24_HUMAN Q19106 ENSDARP00000027975 Q7TND4 ENSMUSP00000034707 ENSCBRP00000008566 ENSANGP00000013716 STH1_YEAST ENSCBRP00000012991 ENSPTRP00000035463 ENSRNOP00000016283 SINFRUP00000136933) |