Data format example:


The following example is what generated the logos above. You can use upper case letters as well as lower case letters. The data illustrated here is part of the data from Hansen et. al. Glycoconjugate Journal 1997, in press.



> AETPMFPGNGDEQPLTENPRKYVMGHFRWDR
> FRWPESPKAQASSVPTAQPQAEGSLAKATTA
> VPTAQPQAEGSLAKATTAPATTRNTGRGGEE
> PTAQPQAEGSLAKATTAPATTRNTGRGGEEK
> PQAEGSLAKATTAPATTRNTGRGGEEKKKEK
> QAEGSLAKATTAPATTRNTGRGGEEKKKEKE
> NPLPKPAKSPPVSNSTPTMISPSPTPTQPPP
> PPVSNSTPTMISPSPTPTQPPPAGTGDRLLN
> VSNSTPTMISPSPTPTQPPPAGTGDRLLNLV
> RLLNLVQGAYQALNLTNPDKTQECWLCLVSG
> VQGAYQALNLTNPDKTQECWLCLVSGPPYYE
> DASELEHYDPADLSPTESSLDLLGLNRTEPS
> VAQATSSSGEAPDSITWKPYDAADLDPTENP
> DSITWKPYDAADLDPTENPFDLLDFNQTQPE
> LEPDPGMASASTTMHTTTIAEPDPGMSGWPD
> EPDPGMASASTTMHTTTIAEPDPGMSGWPDG
> PDPGMASASTTMHTTTIAEPDPGMSGWPDGR
> VSSQSNDKHTSDSHPTPTSAHEVTTEFSGRT
> SQSNDKHTSDSHPTPTSAHEVTTEFSGRTHY
> HTSDSHPTPTSAHEVTTEFSGRTHYPPEEDD
> TSDSHPTPTSAHEVTTEFSGRTHYPPEEDDR
> TPTSAHEVTTEFSGRTHYPPEEDDRVQLVHE
> WDYCPISRCEGDTTPTIVNLDHPVISCAKTK
> CATPAKSERDVSTPPTVLPDNFPRYPVGKFF
> DPESLQDRGEGKVATTVISKMLFVEPILEVS
> VEPILEVSSLPTTNSTTNSATKITANTTDEP
> TNSTTNSATKITANTTDEPTTQPTTEPTTQP
> NSATKITANTTDEPTTQPTTEPTTQPTIQPT
> KITANTTDEPTTQPTTEPTTQPTIQPTQPTT
> NTTDEPTTQPTTEPTTQPTIQPTQPTTQLPT
> QLNDLEACVIQGVGVTETPLMKEDSILAVRK
> SPFRSSRIGEIKEETTVSPPHTSMAPAQDEE
> GWKTEHLASSSEDSTTPSAQTQEKTEGPTPI
> SSEDSTTPSAQTQEKTEGPTPIPSLAKPGVT
> STTPSAQTQEKTEGPTPIPSLAKPGVTVTFS
> TEGPTPIPSLAKPGVTVTFSDFQDSDLIATM
> VTVTFSDFQDSDLIATMMPPISPAPIQSDDD
> PAPIQSDDDWIPDIQTDPNGLSFNPISDFPD
> AIQTCLITPAEGPVVTAQYECLGCVHPISTK
> FSPFRSVQVMKTEGSTTVSLPHSAMSPVQDE
> SPFRSVQVMKTEGSTTVSLPHSAMSPVQDEE
> SYEDSTTSSAQTQEKTEETTLSSLAQPGVAI
> STTSSAQTQEKTEETTLSSLAQPGVAIAFPD
> VAIAFPDFQDSDLIATVMPNTLPPHTESDDD
> PDFQDSDLIATVMPNTLPPHTESDDDWIPDI
> PPHTESDDDWIPDIQTEPNSLAFKLISDFPE
> TTAVQTPTSGEPLVSTSEPLSSKMYTTSITS
> EPLVSTSEPLSSKMYTTSITSDPKADSTGDQ
> PLVSTSEPLSSKMYTTSITSDPKADSTGDQT
> STSEPLSSKMYTTSITSDPKADSTGDQTSAL
> KMYTTSITSDPKADSTGDQTSALPPSTSINE
> KADSTGDQTSALPPSTSINEGSPLWTSIGAS
> TYQEVSIKMSSVPQETPHATSHPAVPITANS
> VSIKMSSVPQETPHATSHPAVPITANSLGSH
> TANSLGSHTVTGGTITTNSPETSSRTSGAPV
> ANSLGSHTVTGGTITTNSPETSSRTSGAPVT
> LETSRGTSGPPLTMATVSLETSKGTSGPPVT




Last updated September 20, 1997 by Jan Gorodkin

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