| Row | Tax ID | Kingdom | Phylum | Organism | Released | Modified | Length | CDS | tRNA | rRNA | Coding density | Avg. protein length | Replicons/ chromosomes | Entrez project |
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| 1 | 329726 | B | Cyanobacteria | Acaryochloris marina MBIC11017 | 2007-10-16 | 2008-07-25 | 8,361,599 | 8,383 | 69 | 6 | 83.0 | 133.9 | 10 (1) | 12997 |
| 2 | 441768 | B | Firmicutes | Acholeplasma laidlawii PG-8A | 2007-12-07 | 2008-07-30 | 1,496,992 | 1,380 | 34 | 6 | 90.4 | 153.4 | 1 (1) | 19259 |
| 3 | 349163 | B | Alphaproteobacteria | Acidiphilium cryptum JF-5 | 2007-05-11 | 2008-07-26 | 3,963,080 | 3,559 | 47 | 6 | 89.4 | 145.2 | 9 (1) | 15753 |
| 4 | 243159 | B | Gammaproteobacteria | Acidithiobacillus ferrooxidans ATCC 23270 | 2008-12-19 | 2009-01-28 | 2,982,397 | 3,147 | 81 | 6 | 89.5 | 135.4 | 1 (1) | 53 |
| 5 | 380394 | B | Other Bacteria | Acidithiobacillus ferrooxidans ATCC 53993 | 2008-09-05 | 2008-09-08 | 2,885,038 | 2,826 | 46 | 6 | 88.8 | 135.5 | 1 (1) | 16689 |
| 6 | 204669 | B | Acidobacteria | Acidobacteria bacterium Ellin345 | 2006-05-04 | 2009-04-02 | 5,650,368 | 4,777 | 47 | 3 | 89.2 | 152.9 | 1 (1) | 15771 |
| 7 | 351607 | B | Actinobacteria | Acidothermus cellulolyticus 11B | 2006-11-09 | 2008-07-28 | 2,443,540 | 2,157 | 46 | 3 | 89.6 | 154.0 | 1 (1) | 16097 |
| 8 | 397945 | B | Betaproteobacteria | Acidovorax avenae subsp. citrulli AAC00-1 | 2007-01-04 | 2008-07-29 | 5,352,772 | 4,709 | 53 | 9 | 89.0 | 150.1 | 1 (1) | 15708 |
| 9 | 232721 | B | Betaproteobacteria | Acidovorax sp. JS42 | 2007-01-04 | 2008-07-21 | 4,585,154 | 4,155 | 51 | 9 | 87.5 | 140.1 | 3 (1) | 15685 |
| 10 | 480119 | B | Gammaproteobacteria | Acinetobacter baumannii AB0057 | 2008-11-17 | 2008-11-17 | 4,059,242 | 3,801 | 73 | 18 | 85.2 | 147.0 | 2 (1) | 21111 |
| 11 | 557600 | B | Gammaproteobacteria | Acinetobacter baumannii AB307-0294 | 2008-11-24 | 2008-12-11 | 3,760,981 | 3,458 | 73 | 18 | 85.9 | 151.0 | 1 (1) | 30993 |
| 12 | 405416 | B | Gammaproteobacteria | Acinetobacter baumannii ACICU | 2008-04-15 | 2008-11-12 | 3,996,761 | 3,759 | 64 | 18 | 86.7 | 148.8 | 3 (1) | 17827 |
| 13 | 400667 | B | Gammaproteobacteria | Acinetobacter baumannii ATCC 17978 | 2007-03-01 | 2009-01-21 | 4,001,457 | 3,803 | 69 | 15 | 84.1 | 142.8 | 3 (1) | 17477 |
| 14 | 509173 | B | Gammaproteobacteria | Acinetobacter baumannii AYE | 2008-02-29 | 2008-07-30 | 4,048,735 | 3,789 | 72 | 18 | 86.1 | 148.1 | 5 (1) | 28921 |
| 15 | 509170 | B | Gammaproteobacteria | Acinetobacter baumannii SDF | 2008-02-29 | 2008-07-30 | 3,477,996 | 3,577 | 64 | 15 | 78.6 | 122.9 | 4 (1) | 13001 |
| 16 | 62977 | B | Gammaproteobacteria | Acinetobacter sp. ADP1 | 2004-10-30 | 2008-12-31 | 3,598,621 | 3,310 | 76 | 21 | 87.3 | 152.1 | 1 (1) | 12352 |
| 17 | 416269 | B | Gammaproteobacteria | Actinobacillus pleuropneumoniae L20 | 2007-02-23 | 2008-07-29 | 2,274,482 | 2,012 | 62 | 18 | 86.1 | 154.4 | 1 (1) | 18221 |
| 18 | 434271 | B | Gammaproteobacteria | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 2008-01-16 | 2008-07-29 | 2,242,062 | 2,036 | 63 | 19 | 85.5 | 147.6 | 1 (1) | 19135 |
| 19 | 537457 | B | Gammaproteobacteria | Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2008-06-10 | 2008-09-22 | 2,345,435 | 2,142 | 62 | 16 | 87.5 | 152.8 | 4 (1) | 29909 |
| 20 | 339671 | B | Gammaproteobacteria | Actinobacillus succinogenes 130Z | 2007-07-05 | 2008-07-25 | 2,319,663 | 2,079 | 60 | 19 | 87.6 | 140.7 | 1 (1) | 13370 |
| 21 | 380703 | B | Gammaproteobacteria | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 2006-11-06 | 2008-07-28 | 4,744,448 | 4,122 | 128 | 30 | 87.3 | 160.6 | 1 (1) | 16697 |
| 22 | 382245 | B | Gammaproteobacteria | Aeromonas salmonicida subsp. salmonicida A449 | 2007-04-06 | 2008-07-28 | 5,040,536 | 4,437 | 110 | 28 | 81.9 | 143.7 | 6 (1) | 16723 |
| 23 | 272557 | A | Crenarchaeota | Aeropyrum pernix K1 | 1999-06-26 | 2008-07-22 | 1,669,696 | 1,700 | 47 | 3 | 88.4 | 136.5 | 1 (1) | 211 |
| 24 | 311403 | B | Alphaproteobacteria | Agrobacterium radiobacter K84 | 2009-01-27 | 2009-03-27 | 7,273,300 | 6,684 | 51 | 9 | 87.0 | 153.8 | 5 (2) | 13402 |
| 25 | 176299 | B | Alphaproteobacteria | Agrobacterium tumefaciens str. C58 | 2001-12-18 | 2008-09-16 | 5,674,258 | 5,355 | 56 | 12 | 87.9 | 149.1 | 4 (2) | 283 |
| 26 | 311402 | B | Alphaproteobacteria | Agrobacterium vitis S4 | 2009-01-27 | 2009-03-27 | 6,320,946 | 5,389 | 54 | 12 | 85.0 | 159.0 | 7 (2) | 13372 |
| 27 | 349741 | B | Other Bacteria | Akkermansia muciniphila ATCC BAA-835 | 2008-05-05 | 2008-07-26 | 2,664,102 | 2,138 | 53 | 9 | 86.9 | 154.7 | 1 (1) | 20089 |
| 28 | 393595 | B | Gammaproteobacteria | Alcanivorax borkumensis SK2 | 2006-07-24 | 2008-07-28 | 3,120,143 | 2,755 | 42 | 9 | 87.4 | 161.1 | 1 (1) | 13005 |
| 29 | 316275 | B | Gammaproteobacteria | Aliivibrio salmonicida LFI1238 | 2008-10-01 | 2008-12-11 | 4,655,660 | 4,284 | 105 | 37 | 77.7 | 69.0 | 6 (2) | 30703 |
| 30 | 187272 | B | Gammaproteobacteria | Alkalilimnicola ehrlichei MLHE-1 | 2006-09-12 | 2008-07-19 | 3,275,944 | 2,865 | 48 | 6 | 90.2 | 152.7 | 1 (1) | 15763 |
| 31 | 293826 | B | Firmicutes | Alkaliphilus metalliredigens QYMF | 2007-06-28 | 2008-07-23 | 4,929,566 | 4,625 | 106 | 30 | 82.7 | 131.5 | 1 (1) | 13006 |
| 32 | 350688 | B | Firmicutes | Alkaliphilus oremlandii OhILAs | 2007-10-11 | 2008-07-27 | 3,123,558 | 2,836 | 86 | 26 | 84.2 | 137.5 | 1 (1) | 16083 |
| 33 | 314275 | B | Gammaproteobacteria | Alteromonas macleodii Deep ecotype | 2008-08-14 | 2009-01-27 | 4,412,282 | 4,072 | 40 | 16 | 85.9 | 152.3 | 1 (1) | 13374 |
| 34 | 240292 | B | Cyanobacteria | Anabaena variabilis ATCC 29413 | 2005-09-15 | 2008-09-22 | 7,068,601 | 5,657 | 47 | 12 | 81.8 | 155.9 | 4 (1) | 10642 |
| 35 | 521460 | B | Firmicutes | Anaerocellum thermophilum DSM 6725 | 2009-02-04 | 2009-02-04 | 2,931,662 | 2,666 | 47 | 9 | 85.3 | 139.8 | 3 (1) | 29407 |
| 36 | 455488 | B | Deltaproteobacteria | Anaeromyxobacter dehalogenans 2CP-1 | 2009-01-12 | 2009-01-15 | 5,029,329 | 4,473 | 49 | 6 | 90.0 | 147.7 | 1 (1) | 20095 |
| 37 | 290397 | B | Deltaproteobacteria | Anaeromyxobacter dehalogenans 2CP-C | 2006-01-27 | 2008-07-23 | 5,013,479 | 4,346 | 49 | 6 | 90.8 | 153.2 | 1 (1) | 12634 |
| 38 | 404589 | B | Deltaproteobacteria | Anaeromyxobacter sp. Fw109-5 | 2007-07-17 | 2008-07-29 | 5,277,990 | 4,466 | 49 | 6 | 89.7 | 163.3 | 1 (1) | 17729 |
| 39 | 447217 | B | Deltaproteobacteria | Anaeromyxobacter sp. K | 2008-08-15 | 2008-08-21 | 5,061,632 | 4,457 | 49 | 6 | 90.3 | 148.8 | 1 (1) | 19743 |
| 40 | 320483 | B | Alphaproteobacteria | Anaplasma marginale str. Florida | 2009-02-03 | 2009-02-04 | 1,202,435 | 942 | 37 | 3 | 85.5 | 163.0 | 1 (1) | 16369 |
| 41 | 234826 | B | Alphaproteobacteria | Anaplasma marginale str. St. Maries | 2004-12-08 | 2009-02-04 | 1,197,687 | 949 | 37 | 0 | 85.5 | 169.4 | 1 (1) | 40 |
| 42 | 212042 | B | Alphaproteobacteria | Anaplasma phagocytophilum HZ | 2006-02-21 | 2008-07-20 | 1,471,282 | 1,264 | 37 | 3 | 68.0 | 117.8 | 1 (1) | 336 |
| 43 | 491915 | B | Firmicutes | Anoxybacillus flavithermus WK1 | 2008-11-13 | 2008-12-03 | 2,846,746 | 2,832 | 77 | 24 | 87.9 | 140.1 | 1 (1) | 28245 |
| 44 | 224324 | B | Aquificae | Aquifex aeolicus VF5 | 1998-04-16 | 2008-11-12 | 1,590,791 | 1,553 | 44 | 6 | 92.3 | 149.4 | 2 (1) | 215 |
| 45 | 224325 | A | Euryarchaeota | Archaeoglobus fulgidus DSM 4304 | 1997-12-06 | 2008-11-12 | 2,178,400 | 2,407 | 46 | 3 | 91.3 | 131.9 | 1 (1) | 104 |
| 46 | 367737 | B | Epsilonproteobacteria | Arcobacter butzleri RM4018 | 2007-09-27 | 2008-07-28 | 2,341,251 | 2,259 | 54 | 15 | 92.9 | 154.0 | 1 (1) | 16319 |
| 47 | 76114 | B | Betaproteobacteria | Aromatoleum aromaticum EbN1 | 2004-11-20 | 2009-01-21 | 4,727,255 | 4,598 | 58 | 12 | 90.7 | 151.0 | 3 (1) | 13242 |
| 48 | 290340 | B | Actinobacteria | Arthrobacter aurescens TC1 | 2006-12-26 | 2008-07-23 | 5,226,648 | 4,587 | 54 | 18 | 87.3 | 159.6 | 3 (1) | 12512 |
| 49 | 452863 | B | Actinobacteria | Arthrobacter chlorophenolicus A6 | 2009-01-09 | 2009-01-15 | 4,980,870 | 4,590 | 88 | 15 | 88.8 | 145.2 | 3 (1) | 20011 |
| 50 | 290399 | B | Actinobacteria | Arthrobacter sp. FB24 | 2006-10-24 | 2008-07-25 | 5,070,478 | 4,506 | 51 | 15 | 89.0 | 151.4 | 4 (1) | 12640 |
| 51 | 322098 | B | Firmicutes | Aster yellows witches-broom phytoplasma AYWB | 2006-01-11 | 2008-07-25 | 723,970 | 693 | 31 | 4 | 73.4 | 117.2 | 5 (1) | 13478 |
| 52 | 62928 | B | Betaproteobacteria | Azoarcus sp. BH72 | 2006-12-20 | 2008-07-18 | 4,376,040 | 3,989 | 56 | 8 | 91.1 | 163.3 | 1 (1) | 13217 |
| 53 | 438753 | B | Alphaproteobacteria | Azorhizobium caulinodans ORS 571 | 2007-10-16 | 2008-07-30 | 5,369,772 | 4,717 | 53 | 9 | 89.7 | 167.1 | 1 (1) | 19267 |
| 54 | 326423 | B | Firmicutes | Bacillus amyloliquefaciens FZB42 | 2007-08-01 | 2008-07-25 | 3,918,589 | 3,693 | 86 | 30 | 87.9 | 149.9 | 1 (1) | 13403 |
| 55 | 198094 | B | Firmicutes | Bacillus anthracis str. Ames | 2003-05-02 | 2008-07-20 | 5,227,293 | 5,311 | 95 | 33 | 80.4 | 125.8 | 1 (1) | 309 |
| 56 | 261594 | B | Firmicutes | Bacillus anthracis str. Ames Ancestor | 2004-05-20 | 2009-03-05 | 5,503,926 | 5,486 | 95 | 33 | 78.3 | 123.7 | 3 (1) | 10784 |
| 57 | 260799 | B | Firmicutes | Bacillus anthracis str. Sterne | 2004-06-24 | 2008-07-21 | 5,228,663 | 5,287 | 95 | 33 | 83.8 | 134.2 | 1 (1) | 10878 |
| 58 | 405534 | B | Firmicutes | Bacillus cereus AH187 | 2008-12-10 | 2008-12-15 | 5,599,857 | 5,796 | 103 | 42 | 83.6 | 129.5 | 5 (1) | 17715 |
| 59 | 405535 | B | Firmicutes | Bacillus cereus AH820 | 2008-12-19 | 2008-12-29 | 5,588,834 | 5,810 | 95 | 36 | 83.7 | 129.6 | 4 (1) | 17711 |
| 60 | 222523 | B | Firmicutes | Bacillus cereus ATCC 10987 | 2004-02-13 | 2008-07-20 | 5,432,652 | 5,844 | 97 | 36 | 84.7 | 127.2 | 2 (1) | 74 |
| 61 | 226900 | B | Firmicutes | Bacillus cereus ATCC 14579 | 2003-05-02 | 2008-07-21 | 5,427,083 | 5,255 | 108 | 34 | 80.5 | 131.5 | 2 (1) | 384 |
| 62 | 405532 | B | Firmicutes | Bacillus cereus B4264 | 2008-12-17 | 2008-12-17 | 5,419,036 | 5,408 | 107 | 42 | 83.6 | 134.7 | 1 (1) | 17731 |
| 63 | 288681 | B | Firmicutes | Bacillus cereus E33L | 2004-09-16 | 2008-07-23 | 5,843,235 | 5,641 | 96 | 39 | 82.1 | 136.1 | 6 (1) | 12468 |
| 64 | 405531 | B | Firmicutes | Bacillus cereus G9842 | 2008-12-19 | 2008-12-29 | 5,736,823 | 5,857 | 98 | 39 | 83.2 | 131.0 | 3 (1) | 17733 |
| 65 | 361100 | B | Firmicutes | Bacillus cereus Q1 | 2009-01-23 | 2009-01-28 | 5,506,207 | 5,502 | 94 | 39 | 83.2 | 134.4 | 3 (1) | 16220 |
| 66 | 315749 | B | Firmicutes | Bacillus cereus subsp. cytotoxis NVH 391-98 | 2007-07-17 | 2009-01-29 | 4,094,159 | 3,844 | 106 | 39 | 79.1 | 123.3 | 2 (1) | 13624 |
| 67 | 66692 | B | Firmicutes | Bacillus clausii KSM-K16 | 2005-01-03 | 2008-07-18 | 4,303,871 | 4,108 | 73 | 22 | 85.5 | 144.6 | 1 (1) | 13291 |
| 68 | 272558 | B | Firmicutes | Bacillus halodurans C-125 | 1999-03-23 | 2008-07-22 | 4,202,352 | 4,066 | 78 | 25 | 84.9 | 141.0 | 1 (1) | 235 |
| 69 | 279010 | B | Firmicutes | Bacillus licheniformis ATCC 14580 | 2004-10-06 | 2008-07-23 | 4,222,597 | 4,179 | 72 | 21 | 85.6 | 139.0 | 1 (1) | 12388 |
| 70 | 279010 | B | Firmicutes | Bacillus licheniformis ATCC 14580 | 2004-09-24 | 2008-07-23 | 4,222,645 | 4,196 | 72 | 21 | 86.9 | 142.2 | 1 (1) | 13082 |
| 71 | 315750 | B | Firmicutes | Bacillus pumilus SAFR-032 | 2007-09-26 | 2009-03-20 | 3,704,465 | 3,681 | 69 | 21 | 86.7 | 139.7 | 1 (1) | 20391 |
| 72 | 224308 | B | Firmicutes | Bacillus subtilis subsp. subtilis str. 168 | 1997-12-31 | 2008-12-03 | 4,214,630 | 4,106 | 86 | 30 | 87.0 | 143.5 | 1 (1) | 76 |
| 73 | 281309 | B | Firmicutes | Bacillus thuringiensis serovar konkukian str. 97-27 | 2004-06-30 | 2008-07-23 | 5,314,794 | 5,197 | 105 | 39 | 83.6 | 137.3 | 2 (1) | 10877 |
| 74 | 412694 | B | Firmicutes | Bacillus thuringiensis str. Al Hakam | 2006-11-27 | 2008-07-29 | 5,313,030 | 4,798 | 104 | 42 | 82.5 | 146.2 | 2 (1) | 18255 |
| 75 | 315730 | B | Firmicutes | Bacillus weihenstephanensis KBAB4 | 2007-12-21 | 2008-07-24 | 5,872,743 | 5,653 | 108 | 42 | 81.1 | 131.7 | 5 (1) | 13623 |
| 76 | 272559 | B | Bacteroidetes/Chlorobi | Bacteroides fragilis NCTC 9343 | 2005-03-03 | 2008-07-22 | 5,241,700 | 4,308 | 73 | 19 | 88.0 | 96.4 | 2 (1) | 46 |
| 77 | 295405 | B | Bacteroidetes/Chlorobi | Bacteroides fragilis YCH46 | 2004-10-15 | 2008-07-23 | 5,310,990 | 4,625 | 74 | 18 | 89.9 | 169.5 | 2 (1) | 13067 |
| 78 | 226186 | B | Bacteroidetes/Chlorobi | Bacteroides thetaiotaomicron VPI-5482 | 2003-03-29 | 2008-07-21 | 6,293,399 | 4,816 | 71 | 15 | 89.3 | 190.2 | 2 (1) | 399 |
| 79 | 435590 | B | Bacteroidetes/Chlorobi | Bacteroides vulgatus ATCC 8482 | 2007-06-27 | 2008-07-30 | 5,163,189 | 4,065 | 85 | 21 | 88.2 | 181.1 | 1 (1) | 13378 |
| 80 | 360095 | B | Alphaproteobacteria | Bartonella bacilliformis KC583 | 2007-01-04 | 2008-07-27 | 1,445,021 | 1,283 | 44 | 6 | 80.5 | 142.0 | 1 (1) | 16249 |
| 81 | 283166 | B | Alphaproteobacteria | Bartonella henselae str. Houston-1 | 2004-06-24 | 2008-07-23 | 1,931,047 | 1,612 | 44 | 7 | 72.6 | 139.3 | 1 (1) | 196 |
| 82 | 283165 | B | Alphaproteobacteria | Bartonella quintana str. Toulouse | 2004-06-24 | 2008-07-23 | 1,581,384 | 1,308 | 42 | 6 | 72.1 | 138.6 | 1 (1) | 44 |
| 83 | 382640 | B | Alphaproteobacteria | Bartonella tribocorum CIP 105476 | 2007-11-25 | 2008-09-18 | 2,642,404 | 2,154 | 42 | 6 | 73.9 | 146.2 | 2 (1) | 28109 |
| 84 | 374463 | B | Gammaproteobacteria | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) | 2006-04-27 | 2008-07-28 | 686,194 | 595 | 39 | 6 | 85.3 | 147.6 | 1 (1) | 12513 |
| 85 | 264462 | B | Deltaproteobacteria | Bdellovibrio bacteriovorus HD100 | 2004-01-31 | 2008-07-22 | 3,782,950 | 3,583 | 36 | 0 | 92.7 | 131.4 | 1 (1) | 9637 |
| 86 | 395963 | B | Alphaproteobacteria | Beijerinckia indica subsp. indica ATCC 9039 | 2008-04-11 | 2008-07-29 | 4,418,616 | 3,784 | 52 | 10 | 82.0 | 140.6 | 3 (1) | 20841 |
| 87 | 367928 | B | Actinobacteria | Bifidobacterium adolescentis ATCC 15703 | 2006-12-05 | 2008-07-28 | 2,089,645 | 1,631 | 54 | 15 | 86.3 | 171.1 | 1 (1) | 16321 |
| 88 | 442563 | B | Actinobacteria | Bifidobacterium animalis subsp. lactis AD011 | 2009-01-06 | 2009-01-06 | 1,933,695 | 1,528 | 52 | 7 | 84.4 | 169.0 | 1 (1) | 19423 |
| 89 | 205913 | B | Actinobacteria | Bifidobacterium longum DJO10A | 2008-06-05 | 2008-09-22 | 2,389,526 | 2,003 | 58 | 13 | 86.1 | 161.6 | 3 (1) | 18773 |
| 90 | 206672 | B | Actinobacteria | Bifidobacterium longum NCC2705 | 2002-10-17 | 2008-07-20 | 2,260,266 | 1,729 | 57 | 12 | 85.2 | 173.9 | 2 (1) | 328 |
| 91 | 391904 | B | Actinobacteria | Bifidobacterium longum subsp. infantis ATCC 15697 | 2008-11-20 | 2008-12-18 | 2,832,748 | 2,416 | 79 | 12 | 84.9 | 148.6 | 1 (1) | 17189 |
| 92 | 360910 | B | Betaproteobacteria | Bordetella avium 197N | 2006-09-29 | 2008-07-28 | 3,732,255 | 3,423 | 61 | 9 | 88.2 | 117.6 | 1 (1) | 27 |
| 93 | 257310 | B | Betaproteobacteria | Bordetella bronchiseptica RB50 | 2003-08-12 | 2008-07-21 | 5,339,179 | 5,006 | 55 | 9 | 91.6 | 85.0 | 1 (1) | 24 |
| 94 | 257311 | B | Betaproteobacteria | Bordetella parapertussis 12822 | 2003-08-12 | 2008-07-21 | 4,773,551 | 4,402 | 54 | 9 | 86.3 | 81.5 | 1 (1) | 25 |
| 95 | 257313 | B | Betaproteobacteria | Bordetella pertussis Tohama I | 2003-08-12 | 2009-01-06 | 4,086,189 | 3,806 | 51 | 9 | 82.5 | 75.1 | 1 (1) | 26 |
| 96 | 340100 | B | Betaproteobacteria | Bordetella petrii DSM 12804 | 2007-12-18 | 2008-09-22 | 5,287,950 | 5,035 | 51 | 9 | 90.3 | 155.7 | 1 (1) | 28135 |
| 97 | 390236 | B | Spirochaetes | Borrelia afzelii PKo | 2006-07-31 | 2009-01-27 | 1,201,674 | 1,215 | 33 | 5 | 87.9 | 131.8 | 9 (1) | 17057 |
| 98 | 224326 | B | Spirochaetes | Borrelia burgdorferi B31 | 1997-12-24 | 2008-07-21 | 1,519,856 | 1,639 | 18 | 5 | 85.4 | 113.8 | 22 (1) | 3 |
| 99 | 445985 | B | Spirochaetes | Borrelia burgdorferi ZS7 | 2008-12-17 | 2008-12-17 | 1,345,494 | 1,239 | 33 | 3 | 82.0 | 129.1 | 15 (1) | 19839 |
| 100 | 412419 | B | Spirochaetes | Borrelia duttonii Ly | 2008-09-15 | 2008-09-17 | 1,574,881 | 1,305 | 32 | 3 | 80.2 | 136.7 | 17 (1) | 18231 |
| 101 | 290434 | B | Spirochaetes | Borrelia garinii PBi | 2004-11-18 | 2008-07-23 | 986,914 | 932 | 31 | 5 | 91.3 | 146.4 | 3 (1) | 12554 |
| 102 | 314723 | B | Spirochaetes | Borrelia hermsii DAH | 2006-12-22 | 2008-05-09 | 922,307 | 819 | 32 | 2 | 93.4 | 165.6 | 1 (1) | 29637 |
| 103 | 412418 | B | Spirochaetes | Borrelia recurrentis A1 | 2008-09-15 | 2008-09-17 | 1,242,163 | 990 | 32 | 3 | 79.9 | 147.5 | 8 (1) | 18233 |
| 104 | 314724 | B | Spirochaetes | Borrelia turicatae 91E135 | 2006-12-22 | 2008-12-12 | 917,330 | 818 | 32 | 2 | 93.8 | 165.8 | 1 (1) | 13597 |
| 105 | 224911 | B | Alphaproteobacteria | Bradyrhizobium japonicum USDA 110 | 2003-02-25 | 2008-07-21 | 9,105,828 | 8,317 | 50 | 3 | 86.8 | 157.4 | 1 (1) | 17 |
| 106 | 288000 | B | Alphaproteobacteria | Bradyrhizobium sp. BTAi1 | 2007-05-11 | 2008-07-23 | 8,493,513 | 7,622 | 52 | 8 | 85.4 | 154.9 | 2 (1) | 16137 |
| 107 | 114615 | B | Alphaproteobacteria | Bradyrhizobium sp. ORS278 | 2007-05-01 | 2008-07-18 | 7,456,587 | 6,752 | 50 | 6 | 85.4 | 155.2 | 1 (1) | 19575 |
| 108 | 262698 | B | Alphaproteobacteria | Brucella abortus bv. 1 str. 9-941 | 2005-04-05 | 2008-09-22 | 3,286,445 | 3,085 | 55 | 9 | 81.1 | 135.0 | 2 (2) | 9619 |
| 109 | 430066 | B | Alphaproteobacteria | Brucella abortus S19 | 2008-05-22 | 2008-10-23 | 3,283,936 | 3,000 | 55 | 9 | 83.0 | 144.6 | 2 (2) | 18999 |
| 110 | 483179 | B | Alphaproteobacteria | Brucella canis ATCC 23365 | 2007-11-29 | 2008-07-30 | 3,312,769 | 3,251 | 55 | 12 | 84.6 | 136.4 | 2 (2) | 20243 |
| 111 | 224914 | B | Alphaproteobacteria | Brucella melitensis 16M | 2002-01-05 | 2008-07-21 | 3,294,931 | 3,198 | 54 | 12 | 86.5 | 144.7 | 2 (2) | 180 |
| 112 | 359391 | B | Alphaproteobacteria | Brucella melitensis biovar Abortus 2308 | 2005-11-22 | 2008-07-27 | 3,278,307 | 3,350 | 55 | 9 | 80.5 | 127.3 | 2 (2) | 16203 |
| 113 | 444178 | B | Alphaproteobacteria | Brucella ovis ATCC 25840 | 2007-05-30 | 2008-07-30 | 3,275,590 | 2,892 | 53 | 9 | 78.9 | 139.2 | 2 (2) | 12514 |
| 114 | 204722 | B | Alphaproteobacteria | Brucella suis 1330 | 2002-09-25 | 2008-07-20 | 3,315,175 | 3,273 | 0 | 0 | 84.4 | 136.8 | 2 (2) | 320 |
| 115 | 470137 | B | Alphaproteobacteria | Brucella suis ATCC 23445 | 2007-12-20 | 2008-07-30 | 3,324,607 | 3,241 | 54 | 12 | 83.4 | 134.9 | 2 (2) | 20371 |
| 116 | 563178 | B | Gammaproteobacteria | Buchnera aphidicola str. 5A (Acyrthosiphon pisum) | 2009-01-06 | 2009-01-06 | 642,122 | 555 | 32 | 3 | 85.7 | 145.3 | 1 (1) | 31225 |
| 117 | 107806 | B | Gammaproteobacteria | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | 2000-09-19 | 2008-11-12 | 655,725 | 574 | 32 | 3 | 86.1 | 149.9 | 3 (1) | 245 |
| 118 | 224915 | B | Gammaproteobacteria | Buchnera aphidicola str. Bp (Baizongia pistaciae) | 2003-01-11 | 2008-07-21 | 618,379 | 507 | 32 | 3 | 80.9 | 147.3 | 2 (1) | 256 |
| 119 | 372461 | B | Gammaproteobacteria | Buchnera aphidicola str. Cc (Cinara cedri) | 2006-10-18 | 2008-07-28 | 422,434 | 365 | 31 | 3 | 84.9 | 142.2 | 2 (1) | 16372 |
| 120 | 198804 | B | Gammaproteobacteria | Buchnera aphidicola str. Sg (Schizaphis graminum) | 2002-06-29 | 2008-07-20 | 641,454 | 545 | 32 | 3 | 83.1 | 143.5 | 1 (1) | 312 |
| 121 | 561501 | B | Gammaproteobacteria | Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) | 2009-01-06 | 2009-01-06 | 641,895 | 553 | 32 | 3 | 85.2 | 147.1 | 1 (1) | 31223 |
| 122 | 339670 | B | Betaproteobacteria | Burkholderia ambifaria AMMD | 2006-09-21 | 2009-01-02 | 7,528,567 | 6,610 | 69 | 18 | 87.1 | 146.8 | 4 (3) | 13490 |
| 123 | 398577 | B | Betaproteobacteria | Burkholderia ambifaria MC40-6 | 2008-04-03 | 2009-01-02 | 7,642,536 | 6,697 | 68 | 18 | 85.9 | 143.5 | 4 (3) | 17411 |
| 124 | 331271 | B | Betaproteobacteria | Burkholderia cenocepacia AU 1054 | 2006-06-01 | 2008-07-25 | 7,279,116 | 6,477 | 67 | 18 | 86.7 | 144.0 | 3 (3) | 13919 |
| 125 | 331272 | B | Betaproteobacteria | Burkholderia cenocepacia HI2424 | 2006-10-25 | 2008-07-28 | 7,702,840 | 6,919 | 67 | 17 | 87.2 | 143.7 | 4 (3) | 13918 |
| 126 | 216591 | B | Betaproteobacteria | Burkholderia cenocepacia J2315 | 2008-06-19 | 2008-09-24 | 8,055,782 | 7,260 | 74 | 18 | 85.6 | 74.1 | 4 (3) | 339 |
| 127 | 406425 | B | Betaproteobacteria | Burkholderia cenocepacia MC0-3 | 2008-03-13 | 2008-07-29 | 7,971,389 | 7,008 | 67 | 18 | 86.3 | 159.0 | 3 (3) | 17929 |
| 128 | 243160 | B | Betaproteobacteria | Burkholderia mallei ATCC 23344 | 2004-09-21 | 2008-07-23 | 5,835,527 | 5,025 | 56 | 10 | 80.7 | 100.7 | 2 (2) | 171 |
| 129 | 412022 | B | Betaproteobacteria | Burkholderia mallei NCTC 10229 | 2007-01-30 | 2008-07-29 | 5,742,303 | 5,510 | 56 | 10 | 85.8 | 146.1 | 2 (2) | 13943 |
| 130 | 320389 | B | Betaproteobacteria | Burkholderia mallei NCTC 10247 | 2007-02-27 | 2008-07-24 | 5,848,380 | 5,852 | 55 | 10 | 86.7 | 141.7 | 2 (2) | 13946 |
| 131 | 320388 | B | Betaproteobacteria | Burkholderia mallei SAVP1 | 2007-01-05 | 2008-07-24 | 5,232,401 | 5,189 | 55 | 9 | 87.0 | 143.3 | 2 (2) | 13947 |
| 132 | 395019 | B | Betaproteobacteria | Burkholderia multivorans ATCC 17616 | 2008-06-03 | 2008-07-29 | 7,008,810 | 6,230 | 66 | 15 | 84.6 | 151.1 | 4 (3) | 19401 |
| 133 | 395019 | B | Betaproteobacteria | Burkholderia multivorans ATCC 17616 | 2007-11-15 | 2008-07-29 | 7,008,622 | 6,259 | 65 | 15 | 86.7 | 144.2 | 4 (3) | 17407 |
| 134 | 391038 | B | Betaproteobacteria | Burkholderia phymatum STM815 | 2008-04-22 | 2008-07-28 | 8,676,562 | 7,496 | 62 | 16 | 83.9 | 142.8 | 4 (2) | 17409 |
| 135 | 398527 | B | Betaproteobacteria | Burkholderia phytofirmans PsJN | 2008-05-07 | 2008-05-10 | 8,214,658 | 7,241 | 63 | 18 | 85.1 | 142.0 | 3 (2) | 17463 |
| 136 | 357348 | B | Betaproteobacteria | Burkholderia pseudomallei 1106a | 2007-02-27 | 2009-01-21 | 7,089,249 | 7,181 | 59 | 12 | 88.1 | 142.7 | 2 (2) | 16182 |
| 137 | 320372 | B | Betaproteobacteria | Burkholderia pseudomallei 1710b | 2005-09-30 | 2008-07-24 | 7,308,054 | 6,347 | 60 | 12 | 100.9 | 190.9 | 2 (2) | 13954 |
| 138 | 320373 | B | Betaproteobacteria | Burkholderia pseudomallei 668 | 2007-02-27 | 2008-07-24 | 7,040,403 | 7,230 | 59 | 12 | 88.3 | 141.4 | 2 (2) | 13953 |
| 139 | 272560 | B | Betaproteobacteria | Burkholderia pseudomallei K96243 | 2004-09-21 | 2008-07-22 | 7,247,547 | 5,855 | 61 | 12 | 82.4 | 91.6 | 2 (2) | 178 |
| 140 | 269483 | B | Betaproteobacteria | Burkholderia sp. 383 | 2004-04-02 | 2009-01-02 | 8,676,277 | 7,717 | 67 | 18 | 87.2 | 159.7 | 3 (3) | 10695 |
| 141 | 271848 | B | Betaproteobacteria | Burkholderia thailandensis E264 | 2005-12-15 | 2008-08-05 | 6,723,972 | 5,634 | 58 | 12 | 86.8 | 169.4 | 2 (2) | 10774 |
| 142 | 269482 | B | Betaproteobacteria | Burkholderia vietnamiensis G4 | 2007-03-27 | 2008-07-22 | 8,391,070 | 7,617 | 67 | 18 | 85.5 | 138.5 | 8 (3) | 10696 |
| 143 | 266265 | B | Betaproteobacteria | Burkholderia xenovorans LB400 | 2006-04-10 | 2008-09-10 | 9,731,138 | 8,702 | 65 | 18 | 85.8 | 154.7 | 3 (3) | 254 |
| 144 | 351627 | B | Other Bacteria | Caldicellulosiruptor saccharolyticus DSM 8903 | 2007-04-19 | 2008-12-11 | 2,970,275 | 2,679 | 46 | 9 | 86.1 | 143.5 | 1 (1) | 13466 |
| 145 | 397948 | A | Crenarchaeota | Caldivirga maquilingensis IC-167 | 2007-10-05 | 2008-07-29 | 2,077,567 | 1,963 | 42 | 3 | 86.8 | 141.4 | 1 (1) | 17421 |
| 146 | 360104 | B | Epsilonproteobacteria | Campylobacter concisus 13826 | 2007-09-12 | 2008-07-27 | 2,099,413 | 2,080 | 46 | 9 | 89.2 | 141.1 | 3 (1) | 17159 |
| 147 | 360105 | B | Epsilonproteobacteria | Campylobacter curvus 525.92 | 2007-07-25 | 2009-01-27 | 1,971,264 | 1,931 | 46 | 3 | 86.2 | 137.5 | 1 (1) | 17161 |
| 148 | 360106 | B | Epsilonproteobacteria | Campylobacter fetus subsp. fetus 82-40 | 2006-11-27 | 2008-07-27 | 1,773,615 | 1,719 | 41 | 9 | 90.1 | 147.5 | 1 (1) | 16293 |
| 149 | 360107 | B | Epsilonproteobacteria | Campylobacter hominis ATCC BAA-381 | 2007-07-25 | 2008-07-27 | 1,714,951 | 1,687 | 44 | 9 | 84.2 | 134.6 | 2 (1) | 20083 |
| 150 | 195099 | B | Epsilonproteobacteria | Campylobacter jejuni RM1221 | 2005-01-07 | 2008-07-20 | 1,777,831 | 1,838 | 44 | 6 | 90.9 | 139.4 | 1 (1) | 303 |
| 151 | 360109 | B | Epsilonproteobacteria | Campylobacter jejuni subsp. doylei 269.97 | 2007-07-20 | 2008-07-27 | 1,845,106 | 1,731 | 44 | 9 | 82.5 | 131.7 | 1 (1) | 17163 |
| 152 | 354242 | B | Epsilonproteobacteria | Campylobacter jejuni subsp. jejuni 81-176 | 2007-01-09 | 2008-07-27 | 1,699,052 | 1,758 | 44 | 9 | 93.3 | 143.8 | 3 (1) | 16135 |
| 153 | 407148 | B | Epsilonproteobacteria | Campylobacter jejuni subsp. jejuni 81116 | 2007-09-20 | 2008-07-29 | 1,628,115 | 1,626 | 44 | 9 | 93.9 | 149.4 | 1 (1) | 17953 |
| 154 | 192222 | B | Epsilonproteobacteria | Campylobacter jejuni subsp. jejuni NCTC 11168 | 2000-02-25 | 2008-12-19 | 1,641,481 | 1,643 | 43 | 9 | 92.9 | 75.7 | 1 (1) | 8 |
| 155 | 306263 | B | Epsilonproteobacteria | Campylobacter lari RM2100 | 2009-02-05 | 2009-02-05 | 1,571,661 | 1,546 | 46 | 9 | 93.2 | 149.5 | 2 (1) | 12517 |
| 156 | 452471 | B | Bacteroidetes/Chlorobi | Candidatus Amoebophilus asiaticus 5a2 | 2008-06-09 | 2008-06-09 | 1,884,364 | 1,283 | 35 | 3 | 76.7 | 165.2 | 1 (1) | 19981 |
| 157 | 511995 | B | Bacteroidetes/Chlorobi | Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 | 2008-11-12 | 2008-11-13 | 1,224,919 | 852 | 38 | 4 | 70.1 | 152.8 | 5 (1) | 29025 |
| 158 | 203907 | B | Gammaproteobacteria | Candidatus Blochmannia floridanus | 2003-07-30 | 2008-07-20 | 705,557 | 589 | 37 | 3 | 82.9 | 149.6 | 1 (1) | 443 |
| 159 | 291272 | B | Gammaproteobacteria | Candidatus Blochmannia pennsylvanicus str. BPEN | 2005-08-04 | 2008-07-23 | 791,654 | 610 | 39 | 3 | 76.7 | 109.8 | 1 (1) | 13875 |
| 160 | 387662 | B | Gammaproteobacteria | Candidatus Carsonella ruddii PV | 2006-10-16 | 2008-07-28 | 159,662 | 182 | 28 | 3 | 93.8 | 110.0 | 1 (1) | 17977 |
| 161 | 477974 | B | Firmicutes | Candidatus Desulforudis audaxviator MP104C | 2008-03-06 | 2008-07-30 | 2,349,476 | 2,157 | 45 | 6 | 85.1 | 139.4 | 1 (1) | 21047 |
| 162 | 374847 | A | Other Archaea | Candidatus Korarchaeum cryptofilum OPF8 | 2008-03-18 | 2008-11-19 | 1,590,757 | 1,602 | 45 | 3 | 89.6 | 136.3 | 1 (1) | 16525 |
| 163 | 456442 | A | Euryarchaeota | Candidatus Methanoregula boonei 6A8 | 2007-07-26 | 2008-07-30 | 2,542,943 | 2,450 | 47 | 3 | 85.8 | 136.6 | 1 (1) | 18505 |
| 164 | 521011 | A | Euryarchaeota | Candidatus Methanosphaerula palustris E1-9c | 2008-11-14 | 2009-01-09 | 2,922,917 | 2,655 | 55 | 12 | 84.0 | 137.6 | 1 (1) | 29381 |
| 165 | 335992 | B | Alphaproteobacteria | Candidatus Pelagibacter ubique HTCC1062 | 2005-07-22 | 2008-07-25 | 1,308,759 | 1,354 | 32 | 3 | 95.5 | 148.2 | 1 (1) | 13989 |
| 166 | 59748 | B | Firmicutes | Candidatus Phytoplasma australiense | 2008-04-02 | 2008-11-19 | 879,959 | 839 | 35 | 6 | 63.9 | 104.4 | 1 (1) | 29469 |
| 167 | 37692 | B | Other Bacteria | Candidatus Phytoplasma mali | 2008-07-04 | 2008-09-22 | 601,943 | 497 | 32 | 6 | 76.1 | 138.0 | 1 (1) | 25335 |
| 168 | 264201 | B | Chlamydiae/Verrucomicrobia | Candidatus Protochlamydia amoebophila UWE25 | 2004-04-10 | 2008-07-22 | 2,414,465 | 2,031 | 35 | 9 | 82.1 | 158.1 | 1 (1) | 10700 |
| 169 | 413404 | B | Gammaproteobacteria | Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) | 2006-12-01 | 2008-07-29 | 1,160,782 | 976 | 36 | 3 | 79.0 | 133.1 | 1 (1) | 16841 |
| 170 | 444179 | B | Bacteroidetes/Chlorobi | Candidatus Sulcia muelleri GWSS | 2007-07-19 | 2008-12-16 | 245,530 | 227 | 31 | 3 | 91.8 | 132.3 | 1 (1) | 19617 |
| 171 | 412965 | B | Gammaproteobacteria | Candidatus Vesicomyosocius okutanii HA | 2007-05-08 | 2008-07-29 | 1,022,154 | 939 | 35 | 3 | 85.0 | 148.7 | 1 (1) | 18267 |
| 172 | 246194 | B | Firmicutes | Carboxydothermus hydrogenoformans Z-2901 | 2005-10-21 | 2008-07-21 | 2,401,520 | 2,620 | 50 | 12 | 90.1 | 133.2 | 1 (1) | 253 |
| 173 | 190650 | B | Alphaproteobacteria | Caulobacter crescentus CB15 | 2001-03-22 | 2008-11-14 | 4,016,947 | 3,737 | 51 | 6 | 90.3 | 156.2 | 1 (1) | 298 |
| 174 | 565050 | B | Alphaproteobacteria | Caulobacter crescentus NA1000 | 2009-01-16 | 2009-01-23 | 4,042,929 | 3,877 | 51 | 6 | 91.2 | 152.9 | 1 (1) | 32027 |
| 175 | 366602 | B | Alphaproteobacteria | Caulobacter sp. K31 | 2008-02-07 | 2008-07-28 | 5,889,399 | 5,438 | 49 | 7 | 87.7 | 139.9 | 3 (1) | 16306 |
| 176 | 498211 | B | Gammaproteobacteria | Cellvibrio japonicus Ueda107 | 2008-06-19 | 2008-09-22 | 4,576,573 | 3,754 | 48 | 9 | 90.4 | 177.3 | 1 (1) | 28329 |
| 177 | 243161 | B | Chlamydiae/Verrucomicrobia | Chlamydia muridarum Nigg | 2000-02-24 | 2008-07-21 | 1,080,451 | 911 | 37 | 6 | 89.7 | 163.7 | 2 (1) | 229 |
| 178 | 471472 | B | Chlamydiae/Verrucomicrobia | Chlamydia trachomatis 434/Bu | 2008-01-17 | 2008-07-30 | 1,038,842 | 889 | 37 | 6 | 88.8 | 82.7 | 1 (1) | 28583 |
| 179 | 315277 | B | Chlamydiae/Verrucomicrobia | Chlamydia trachomatis A/HAR-13 | 2005-09-23 | 2008-07-24 | 1,051,969 | 919 | 37 | 4 | 89.9 | 161.1 | 2 (1) | 13885 |
| 180 | 272561 | B | Chlamydiae/Verrucomicrobia | Chlamydia trachomatis D/UW-3/CX | 1998-10-23 | 2008-07-22 | 1,042,519 | 894 | 37 | 6 | 89.8 | 162.3 | 1 (1) | 45 |
| 181 | 471473 | B | Chlamydiae/Verrucomicrobia | Chlamydia trachomatis L2b/UCH-1/proctitis | 2008-01-17 | 2008-07-30 | 1,038,869 | 889 | 37 | 6 | 88.8 | 82.7 | 1 (1) | 28585 |
| 182 | 218497 | B | Chlamydiae/Verrucomicrobia | Chlamydophila abortus S26/3 | 2005-04-01 | 2008-07-20 | 1,144,377 | 961 | 38 | 3 | 87.5 | 90.1 | 1 (1) | 355 |
| 183 | 227941 | B | Chlamydiae/Verrucomicrobia | Chlamydophila caviae GPIC | 2003-04-12 | 2008-07-21 | 1,181,356 | 1,005 | 0 | 3 | 89.1 | 169.4 | 2 (1) | 228 |
| 184 | 264202 | B | Chlamydiae/Verrucomicrobia | Chlamydophila felis Fe/C-56 | 2006-03-09 | 2008-07-22 | 1,173,791 | 1,013 | 38 | 3 | 91.0 | 165.6 | 2 (1) | 370 |
| 185 | 115711 | B | Chlamydiae/Verrucomicrobia | Chlamydophila pneumoniae AR39 | 2000-02-24 | 2008-07-18 | 1,229,853 | 1,110 | 38 | 3 | 88.8 | 153.8 | 1 (1) | 247 |
| 186 | 115713 | B | Chlamydiae/Verrucomicrobia | Chlamydophila pneumoniae CWL029 | 1999-04-07 | 2008-07-18 | 1,230,230 | 1,052 | 38 | 3 | 88.2 | 159.3 | 1 (1) | 248 |
| 187 | 138677 | B | Chlamydiae/Verrucomicrobia | Chlamydophila pneumoniae J138 | 2000-06-28 | 2008-07-18 | 1,226,565 | 1,069 | 38 | 0 | 89.6 | 162.3 | 1 (1) | 257 |
| 188 | 182082 | B | Chlamydiae/Verrucomicrobia | Chlamydophila pneumoniae TW-183 | 2003-07-25 | 2008-07-23 | 1,225,935 | 1,113 | 38 | 3 | 90.1 | 160.5 | 1 (1) | 420 |
| 189 | 517417 | B | Bacteroidetes/Chlorobi | Chlorobaculum parvum NCIB 8327 | 2008-06-27 | 2008-09-22 | 2,289,249 | 2,043 | 49 | 6 | 86.7 | 144.3 | 1 (1) | 29213 |
| 190 | 340177 | B | Bacteroidetes/Chlorobi | Chlorobium chlorochromatii CaD3 | 2005-10-26 | 2008-07-25 | 2,572,079 | 2,002 | 45 | 0 | 88.1 | 183.0 | 1 (1) | 13921 |
| 191 | 290315 | B | Bacteroidetes/Chlorobi | Chlorobium limicola DSM 245 | 2008-06-04 | 2008-09-22 | 2,763,181 | 2,434 | 48 | 6 | 86.0 | 145.5 | 1 (1) | 12606 |
| 192 | 331678 | B | Bacteroidetes/Chlorobi | Chlorobium phaeobacteroides BS1 | 2008-06-09 | 2008-09-22 | 2,736,403 | 2,469 | 46 | 6 | 82.8 | 137.3 | 1 (1) | 12608 |
| 193 | 290317 | B | Bacteroidetes/Chlorobi | Chlorobium phaeobacteroides DSM 266 | 2006-12-11 | 2008-07-23 | 3,133,902 | 2,650 | 47 | 6 | 83.9 | 148.6 | 1 (1) | 12609 |
| 194 | 290318 | B | Bacteroidetes/Chlorobi | Chlorobium phaeovibrioides DSM 265 | 2007-04-12 | 2008-07-23 | 1,966,858 | 1,753 | 45 | 3 | 90.9 | 151.5 | 1 (1) | 12607 |
| 195 | 194439 | B | Bacteroidetes/Chlorobi | Chlorobium tepidum TLS | 2002-07-03 | 2009-01-02 | 2,154,946 | 2,255 | 0 | 0 | 88.1 | 137.1 | 1 (1) | 302 |
| 196 | 326427 | B | Chloroflexi | Chloroflexus aggregans DSM 9485 | 2006-11-15 | 2009-01-09 | 4,684,931 | 3,730 | 48 | 9 | 86.3 | 163.9 | 1 (1) | 16708 |
| 197 | 324602 | B | Chloroflexi | Chloroflexus aurantiacus J-10-fl | 2007-12-20 | 2008-07-25 | 5,258,541 | 3,853 | 49 | 9 | 80.2 | 165.8 | 1 (1) | 59 |
| 198 | 480224 | B | Chloroflexi | Chloroflexus sp. Y-400-fl | 2009-02-04 | 2009-02-04 | 5,268,950 | 4,159 | 49 | 9 | 81.3 | 155.9 | 1 (1) | 21119 |
| 199 | 517418 | B | Bacteroidetes/Chlorobi | Chloroherpeton thalassium ATCC 35110 | 2008-06-27 | 2008-09-22 | 3,293,456 | 2,710 | 44 | 3 | 86.4 | 156.6 | 1 (1) | 29215 |
| 200 | 243365 | B | Betaproteobacteria | Chromobacterium violaceum ATCC 12472 | 2003-09-23 | 2008-07-21 | 4,751,080 | 4,407 | 98 | 24 | 88.3 | 153.0 | 1 (1) | 444 |
| 201 | 290398 | B | Gammaproteobacteria | Chromohalobacter salexigens DSM 3043 | 2006-04-11 | 2008-07-23 | 3,696,649 | 3,298 | 69 | 15 | 89.3 | 148.0 | 1 (1) | 12636 |
| 202 | 290338 | B | Gammaproteobacteria | Citrobacter koseri ATCC BAA-895 | 2007-09-11 | 2008-07-23 | 4,735,357 | 5,031 | 81 | 16 | 91.8 | 138.9 | 3 (1) | 12716 |
| 203 | 443906 | B | Actinobacteria | Clavibacter michiganensis subsp. michiganensis NCPPB 382 | 2007-05-19 | 2008-11-19 | 3,395,237 | 3,108 | 45 | 2 | 89.1 | 157.6 | 3 (1) | 19643 |
| 204 | 31964 | B | Actinobacteria | Clavibacter michiganensis subsp. sepedonicus | 2008-02-29 | 2008-11-19 | 3,403,786 | 3,237 | 45 | 6 | 86.4 | 80.7 | 3 (1) | 184 |
| 205 | 272562 | B | Firmicutes | Clostridium acetobutylicum ATCC 824 | 2001-07-24 | 2008-07-22 | 4,132,880 | 3,848 | 73 | 33 | 85.4 | 145.1 | 2 (1) | 77 |
| 206 | 290402 | B | Firmicutes | Clostridium beijerinckii NCIMB 8052 | 2007-06-27 | 2008-07-23 | 6,000,632 | 5,020 | 94 | 43 | 79.2 | 143.2 | 1 (1) | 12637 |
| 207 | 441770 | B | Firmicutes | Clostridium botulinum A str. ATCC 19397 | 2007-07-20 | 2009-01-21 | 3,863,450 | 3,551 | 81 | 24 | 80.9 | 140.8 | 1 (1) | 19517 |
| 208 | 413999 | B | Firmicutes | Clostridium botulinum A str. ATCC 3502 | 2007-05-24 | 2008-07-29 | 3,903,260 | 3,671 | 80 | 27 | 80.9 | 72.7 | 2 (1) | 193 |
| 209 | 441771 | B | Firmicutes | Clostridium botulinum A str. Hall | 2007-07-20 | 2008-07-30 | 3,760,560 | 3,404 | 81 | 24 | 80.3 | 141.2 | 1 (1) | 19521 |
| 210 | 498214 | B | Firmicutes | Clostridium botulinum A3 str. Loch Maree | 2008-03-05 | 2008-07-30 | 4,259,691 | 3,984 | 81 | 27 | 80.9 | 139.0 | 2 (1) | 28507 |
| 211 | 508765 | B | Firmicutes | Clostridium botulinum B str. Eklund 17B | 2008-05-07 | 2008-07-30 | 3,847,969 | 3,527 | 77 | 34 | 82.2 | 142.6 | 2 (1) | 28857 |
| 212 | 498213 | B | Firmicutes | Clostridium botulinum B1 str. Okra | 2008-02-28 | 2008-07-30 | 4,107,013 | 3,852 | 82 | 27 | 80.8 | 138.2 | 2 (1) | 28505 |
| 213 | 508767 | B | Firmicutes | Clostridium botulinum E3 str. Alaska E43 | 2008-05-16 | 2008-09-22 | 3,659,644 | 3,258 | 79 | 34 | 82.2 | 146.5 | 1 (1) | 28855 |
| 214 | 441772 | B | Firmicutes | Clostridium botulinum F str. Langeland | 2007-07-20 | 2008-07-30 | 4,012,918 | 3,659 | 118 | 27 | 80.4 | 139.8 | 2 (1) | 19519 |
| 215 | 394503 | B | Firmicutes | Clostridium cellulolyticum H10 | 2009-01-13 | 2009-01-15 | 4,068,724 | 3,390 | 63 | 24 | 86.3 | 153.5 | 1 (1) | 17419 |
| 216 | 272563 | B | Firmicutes | Clostridium difficile 630 | 2006-09-20 | 2008-07-22 | 4,298,133 | 3,787 | 87 | 32 | 81.9 | 75.7 | 2 (1) | 78 |
| 217 | 431943 | B | Firmicutes | Clostridium kluyveri DSM 555 | 2007-07-19 | 2008-07-29 | 4,023,800 | 3,913 | 61 | 20 | 84.2 | 140.4 | 2 (1) | 19065 |
| 218 | 583346 | B | Firmicutes | Clostridium kluyveri NBRC 12016 | 2009-01-06 | 2009-01-09 | 3,955,303 | 3,523 | 61 | 20 | 83.1 | 151.0 | 2 (1) | 33271 |
| 219 | 386415 | B | Firmicutes | Clostridium novyi NT | 2006-11-17 | 2008-07-28 | 2,547,720 | 2,325 | 81 | 29 | 86.7 | 150.3 | 1 (1) | 16820 |
| 220 | 195103 | B | Firmicutes | Clostridium perfringens ATCC 13124 | 2006-07-25 | 2008-07-20 | 3,256,683 | 2,876 | 93 | 23 | 82.9 | 148.8 | 1 (1) | 304 |
| 221 | 289380 | B | Firmicutes | Clostridium perfringens SM101 | 2006-07-26 | 2008-07-23 | 2,921,996 | 2,578 | 94 | 0 | 81.0 | 144.9 | 3 (1) | 12521 |
| 222 | 195102 | B | Firmicutes | Clostridium perfringens str. 13 | 2002-01-17 | 2008-07-20 | 3,085,740 | 2,723 | 96 | 29 | 83.2 | 148.8 | 2 (1) | 79 |
| 223 | 357809 | B | Firmicutes | Clostridium phytofermentans ISDg | 2007-11-19 | 2008-09-26 | 4,847,594 | 3,902 | 61 | 25 | 81.6 | 152.7 | 1 (1) | 16184 |
| 224 | 212717 | B | Firmicutes | Clostridium tetani E88 | 2003-01-29 | 2008-07-20 | 2,873,333 | 2,432 | 54 | 18 | 85.0 | 161.6 | 2 (1) | 81 |
| 225 | 203119 | B | Firmicutes | Clostridium thermocellum ATCC 27405 | 2007-02-14 | 2008-07-20 | 3,843,301 | 3,191 | 56 | 12 | 83.5 | 150.9 | 1 (1) | 314 |
| 226 | 167879 | B | Gammaproteobacteria | Colwellia psychrerythraea 34H | 2005-07-26 | 2008-07-19 | 5,373,180 | 4,910 | 88 | 28 | 84.4 | 149.5 | 1 (1) | 275 |
| 227 | 309798 | B | Firmicutes | Coprothermobacter proteolyticus DSM 5265 | 2008-09-26 | 2008-09-26 | 1,424,912 | 1,482 | 47 | 6 | 92.6 | 139.7 | 1 (1) | 30729 |
| 228 | 257309 | B | Actinobacteria | Corynebacterium diphtheriae NCTC 13129 | 2003-11-07 | 2008-07-21 | 2,488,635 | 2,320 | 54 | 15 | 87.7 | 65.2 | 1 (1) | 87 |
| 229 | 196164 | B | Actinobacteria | Corynebacterium efficiens YS-314 | 2003-07-04 | 2009-01-02 | 3,147,090 | 2,942 | 56 | 15 | 92.2 | 291.1 | 1 (1) | 305 |
| 230 | 196627 | B | Actinobacteria | Corynebacterium glutamicum ATCC 13032 | 2004-01-26 | 2008-07-20 | 3,282,708 | 3,058 | 60 | 18 | 87.3 | 151.3 | 1 (1) | 13760 |
| 231 | 196627 | B | Actinobacteria | Corynebacterium glutamicum ATCC 13032 | 2003-09-02 | 2008-10-28 | 3,309,401 | 3,099 | 60 | 19 | 87.1 | 152.3 | 1 (1) | 307 |
| 232 | 340322 | B | Actinobacteria | Corynebacterium glutamicum R | 2007-04-04 | 2008-07-25 | 3,363,299 | 3,080 | 0 | 0 | 85.9 | 155.0 | 2 (1) | 19193 |
| 233 | 306537 | B | Actinobacteria | Corynebacterium jeikeium K411 | 2005-06-27 | 2008-11-25 | 2,476,822 | 2,120 | 50 | 9 | 89.1 | 157.9 | 2 (1) | 13967 |
| 234 | 504474 | B | Actinobacteria | Corynebacterium urealyticum DSM 7109 | 2008-04-02 | 2008-11-19 | 2,369,219 | 2,024 | 51 | 9 | 89.5 | 168.4 | 1 (1) | 29211 |
| 235 | 434923 | B | Gammaproteobacteria | Coxiella burnetii CbuG_Q212 | 2008-11-06 | 2009-01-27 | 2,008,870 | 1,871 | 42 | 3 | 77.3 | 127.9 | 1 (1) | 19137 |
| 236 | 434924 | B | Gammaproteobacteria | Coxiella burnetii CbuK_Q154 | 2008-11-06 | 2009-01-27 | 2,102,380 | 1,947 | 42 | 3 | 77.2 | 127.8 | 2 (1) | 19139 |
| 237 | 434922 | B | Gammaproteobacteria | Coxiella burnetii Dugway 5J108-111 | 2007-08-01 | 2009-01-27 | 2,212,937 | 2,045 | 42 | 3 | 81.4 | 132.9 | 2 (1) | 16721 |
| 238 | 360115 | B | Gammaproteobacteria | Coxiella burnetii RSA 331 | 2007-12-05 | 2008-07-27 | 2,053,744 | 1,975 | 41 | 5 | 77.9 | 122.8 | 2 (1) | 16791 |
| 239 | 227377 | B | Gammaproteobacteria | Coxiella burnetii RSA 493 | 2003-04-22 | 2009-01-27 | 2,032,674 | 1,853 | 42 | 3 | 77.3 | 128.6 | 2 (1) | 41 |
| 240 | 290339 | B | Gammaproteobacteria | Cronobacter sakazakii ATCC BAA-894 | 2007-08-28 | 2008-07-23 | 4,530,777 | 4,442 | 80 | 16 | 88.9 | 143.2 | 3 (1) | 12720 |
| 241 | 164546 | B | Betaproteobacteria | Cupriavidus taiwanensis | 2008-03-27 | 2008-09-22 | 6,476,522 | 5,975 | 63 | 15 | 87.8 | 155.1 | 3 (2) | 15733 |
| 242 | 43989 | B | Cyanobacteria | Cyanothece sp. ATCC 51142 | 2008-04-01 | 2009-01-27 | 5,460,377 | 5,304 | 43 | 8 | 86.5 | 144.9 | 6 (2) | 20319 |
| 243 | 65393 | B | Cyanobacteria | Cyanothece sp. PCC 7424 | 2008-12-17 | 2008-12-18 | 6,554,169 | 5,710 | 44 | 9 | 81.1 | 140.0 | 7 (1) | 20479 |
| 244 | 395961 | B | Cyanobacteria | Cyanothece sp. PCC 7425 | 2009-01-09 | 2009-01-15 | 5,786,110 | 5,327 | 47 | 6 | 84.9 | 139.7 | 4 (1) | 28337 |
| 245 | 41431 | B | Cyanobacteria | Cyanothece sp. PCC 8801 | 2008-12-17 | 2008-12-17 | 4,787,694 | 4,367 | 43 | 6 | 84.4 | 139.1 | 4 (1) | 20503 |
| 246 | 269798 | B | Bacteroidetes/Chlorobi | Cytophaga hutchinsonii ATCC 33406 | 2006-07-11 | 2008-07-22 | 4,433,218 | 3,785 | 39 | 9 | 89.9 | 171.5 | 1 (1) | 54 |
| 247 | 159087 | B | Betaproteobacteria | Dechloromonas aromatica RCB | 2005-08-05 | 2008-11-28 | 4,501,104 | 4,171 | 64 | 12 | 91.4 | 145.7 | 1 (1) | 9635 |
| 248 | 243164 | B | Chloroflexi | Dehalococcoides ethenogenes 195 | 2005-01-07 | 2008-07-21 | 1,469,720 | 1,580 | 46 | 3 | 89.6 | 132.8 | 1 (1) | 214 |
| 249 | 216389 | B | Chloroflexi | Dehalococcoides sp. BAV1 | 2007-05-07 | 2008-07-20 | 1,341,892 | 1,371 | 46 | 3 | 89.4 | 131.8 | 1 (1) | 15770 |
| 250 | 255470 | B | Chloroflexi | Dehalococcoides sp. CBDB1 | 2005-08-19 | 2008-07-21 | 1,395,502 | 1,458 | 47 | 3 | 89.7 | 136.9 | 1 (1) | 15604 |
| 251 | 319795 | B | Deinococcus-Thermus | Deinococcus geothermalis DSM 11300 | 2006-05-04 | 2009-01-21 | 3,247,018 | 3,054 | 48 | 12 | 89.5 | 140.0 | 3 (1) | 13423 |
| 252 | 243230 | B | Deinococcus-Thermus | Deinococcus radiodurans R1 | 1999-11-24 | 2008-07-21 | 3,284,156 | 3,102 | 49 | 9 | 87.4 | 145.5 | 4 (2) | 65 |
| 253 | 398578 | B | Betaproteobacteria | Delftia acidovorans SPH-1 | 2007-11-16 | 2008-07-29 | 6,767,514 | 6,040 | 80 | 15 | 89.6 | 163.4 | 1 (1) | 17413 |
| 254 | 439235 | B | Deltaproteobacteria | Desulfatibacillum alkenivorans AK-01 | 2008-12-24 | 2008-12-25 | 6,517,073 | 5,252 | 56 | 6 | 86.9 | 162.0 | 1 (1) | 19449 |
| 255 | 272564 | B | Firmicutes | Desulfitobacterium hafniense DCB-2 | 2009-01-05 | 2009-01-06 | 5,279,134 | 4,883 | 74 | 15 | 86.0 | 139.5 | 1 (1) | 205 |
| 256 | 138119 | B | Firmicutes | Desulfitobacterium hafniense Y51 | 2006-03-09 | 2008-07-18 | 5,727,534 | 5,060 | 59 | 18 | 84.6 | 156.8 | 1 (1) | 16639 |
| 257 | 177437 | B | Deltaproteobacteria | Desulfobacterium autotrophicum HRM2 | 2009-02-18 | 2009-02-27 | 5,657,782 | 4,947 | 50 | 19 | 88.3 | 164.8 | 2 (1) | 20931 |
| 258 | 96561 | B | Deltaproteobacteria | Desulfococcus oleovorans Hxd3 | 2007-10-19 | 2008-09-22 | 3,944,167 | 3,265 | 47 | 3 | 88.0 | 172.9 | 1 (1) | 18007 |
| 259 | 177439 | B | Deltaproteobacteria | Desulfotalea psychrophila LSv54 | 2004-08-13 | 2008-07-19 | 3,659,634 | 3,236 | 65 | 22 | 85.0 | 154.6 | 3 (1) | 12751 |
| 260 | 349161 | B | Firmicutes | Desulfotomaculum reducens MI-1 | 2007-03-24 | 2008-07-26 | 3,608,104 | 3,276 | 71 | 26 | 83.1 | 138.5 | 1 (1) | 13424 |
| 261 | 525146 | B | Deltaproteobacteria | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 2009-01-09 | 2009-01-15 | 2,873,437 | 2,356 | 52 | 12 | 83.4 | 149.7 | 1 (1) | 29493 |
| 262 | 207559 | B | Deltaproteobacteria | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 | 2005-10-28 | 2008-07-20 | 3,730,232 | 3,775 | 66 | 12 | 90.2 | 136.0 | 1 (1) | 329 |
| 263 | 391774 | B | Deltaproteobacteria | Desulfovibrio vulgaris DP4 | 2007-01-03 | 2008-07-30 | 3,661,391 | 3,091 | 68 | 15 | 85.6 | 151.2 | 2 (1) | 17227 |
| 264 | 882 | B | Deltaproteobacteria | Desulfovibrio vulgaris str. Hildenborough | 2004-04-13 | 2008-09-05 | 3,773,159 | 3,531 | 68 | 15 | 85.8 | 146.6 | 2 (1) | 51 |
| 265 | 883 | B | Deltaproteobacteria | Desulfovibrio vulgaris str. Miyazaki F | 2008-12-24 | 2008-12-29 | 4,040,304 | 3,180 | 64 | 12 | 82.3 | 155.3 | 1 (1) | 27731 |
| 266 | 490899 | A | Crenarchaeota | Desulfurococcus kamchatkensis 1221n | 2008-12-24 | 2009-04-06 | 1,365,223 | 1,471 | 47 | 3 | 88.0 | 130.0 | 1 (1) | 28141 |
| 267 | 535289 | B | Betaproteobacteria | Diaphorobacter sp. TPSY | 2009-01-27 | 2009-01-28 | 3,796,573 | 3,479 | 53 | 12 | 89.2 | 141.5 | 1 (1) | 29975 |
| 268 | 246195 | B | Gammaproteobacteria | Dichelobacter nodosus VCS1703A | 2007-05-04 | 2008-07-21 | 1,389,350 | 1,280 | 45 | 9 | 90.2 | 153.0 | 1 (1) | 50 |
| 269 | 309799 | B | Other Bacteria | Dictyoglomus thermophilum H-6-12 | 2008-09-26 | 2008-09-26 | 1,959,987 | 1,912 | 46 | 6 | 93.1 | 153.2 | 1 (1) | 30731 |
| 270 | 515635 | B | Other Bacteria | Dictyoglomus turgidum DSM 6724 | 2008-12-12 | 2008-12-15 | 1,855,560 | 1,744 | 46 | 6 | 92.5 | 144.3 | 1 (1) | 29175 |
| 271 | 398580 | B | Alphaproteobacteria | Dinoroseobacter shibae DFL 12 | 2007-10-05 | 2008-07-29 | 4,417,868 | 4,187 | 44 | 6 | 89.4 | 136.7 | 6 (1) | 17417 |
| 272 | 269484 | B | Alphaproteobacteria | Ehrlichia canis str. Jake | 2005-08-12 | 2008-07-22 | 1,315,030 | 925 | 36 | 3 | 71.9 | 158.2 | 1 (1) | 10694 |
| 273 | 205920 | B | Alphaproteobacteria | Ehrlichia chaffeensis str. Arkansas | 2006-02-21 | 2008-07-20 | 1,176,248 | 1,105 | 37 | 3 | 79.3 | 132.7 | 1 (1) | 325 |
| 274 | 302409 | B | Alphaproteobacteria | Ehrlichia ruminantium str. Gardel | 2005-02-04 | 2008-07-24 | 1,499,920 | 950 | 36 | 3 | 63.7 | 158.8 | 1 (1) | 13356 |
| 275 | 254945 | B | Alphaproteobacteria | Ehrlichia ruminantium str. Welgevonden | 2005-02-04 | 2008-07-21 | 1,512,977 | 958 | 36 | 3 | 63.2 | 157.5 | 1 (1) | 13355 |
| 276 | 254945 | B | Alphaproteobacteria | Ehrlichia ruminantium str. Welgevonden | 2005-01-07 | 2009-01-06 | 1,516,355 | 920 | 36 | 3 | 61.9 | 64.5 | 1 (1) | 9614 |
| 277 | 445932 | B | Other Bacteria | Elusimicrobium minutum Pei191 | 2008-04-30 | 2008-07-30 | 1,643,562 | 1,529 | 45 | 3 | 90.2 | 136.0 | 1 (1) | 19701 |
| 278 | 399742 | B | Gammaproteobacteria | Enterobacter sp. 638 | 2007-04-18 | 2008-07-29 | 4,676,461 | 4,240 | 84 | 22 | 87.1 | 141.1 | 2 (1) | 17461 |
| 279 | 226185 | B | Firmicutes | Enterococcus faecalis V583 | 2003-03-29 | 2008-07-21 | 3,359,974 | 3,265 | 68 | 12 | 85.8 | 139.8 | 4 (1) | 70 |
| 280 | 465817 | B | Gammaproteobacteria | Erwinia tasmaniensis Et1/99 | 2008-05-13 | 2008-11-19 | 4,067,864 | 3,696 | 81 | 22 | 84.6 | 148.2 | 6 (1) | 20585 |
| 281 | 314225 | B | Alphaproteobacteria | Erythrobacter litoralis HTCC2594 | 2006-01-11 | 2008-07-24 | 3,052,398 | 3,011 | 44 | 1 | 91.5 | 151.6 | 1 (1) | 13480 |
| 282 | 362663 | B | Gammaproteobacteria | Escherichia coli 536 | 2006-07-13 | 2008-07-28 | 4,938,920 | 4,685 | 81 | 22 | 87.5 | 150.1 | 1 (1) | 16235 |
| 283 | 585055 | B | Gammaproteobacteria | Escherichia coli 55989 | 2008-12-18 | 2009-02-18 | 5,154,862 | 4,919 | 94 | 22 | 86.8 | 144.5 | 1 (1) | 33413 |
| 284 | 405955 | B | Gammaproteobacteria | Escherichia coli APEC O1 | 2006-10-04 | 2008-07-29 | 5,497,653 | 4,890 | 93 | 0 | 87.0 | 157.4 | 3 (1) | 16718 |
| 285 | 481805 | B | Gammaproteobacteria | Escherichia coli ATCC 8739 | 2008-03-11 | 2008-07-30 | 4,746,218 | 4,200 | 87 | 23 | 86.0 | 141.8 | 1 (1) | 18083 |
| 286 | 199310 | B | Gammaproteobacteria | Escherichia coli CFT073 | 2002-12-10 | 2008-07-20 | 5,231,428 | 5,379 | 89 | 21 | 90.4 | 140.9 | 1 (1) | 313 |
| 287 | 331111 | B | Gammaproteobacteria | Escherichia coli E24377A | 2007-09-11 | 2008-07-25 | 5,249,288 | 4,997 | 91 | 21 | 85.0 | 142.3 | 7 (1) | 13960 |
| 288 | 585397 | B | Gammaproteobacteria | Escherichia coli ED1a | 2008-12-18 | 2009-02-18 | 5,209,548 | 5,123 | 91 | 22 | 85.9 | 139.8 | 1 (1) | 33409 |
| 289 | 331112 | B | Gammaproteobacteria | Escherichia coli HS | 2007-09-10 | 2008-07-25 | 4,643,538 | 4,384 | 88 | 22 | 86.3 | 145.1 | 1 (1) | 13959 |
| 290 | 585034 | B | Gammaproteobacteria | Escherichia coli IAI1 | 2008-12-18 | 2009-02-18 | 4,700,560 | 4,443 | 86 | 22 | 87.6 | 147.4 | 1 (1) | 33373 |
| 291 | 585057 | B | Gammaproteobacteria | Escherichia coli IAI39 | 2008-12-18 | 2009-02-18 | 5,132,068 | 4,892 | 88 | 22 | 86.2 | 144.2 | 1 (1) | 33411 |
| 292 | 574521 | B | Gammaproteobacteria | Escherichia coli O127:H6 str. E2348/69 | 2008-11-26 | 2009-01-06 | 5,069,678 | 4,824 | 92 | 22 | 85.0 | 138.8 | 3 (1) | 32571 |
| 293 | 155864 | B | Gammaproteobacteria | Escherichia coli O157:H7 EDL933 | 2001-02-24 | 2009-03-20 | 5,620,522 | 5,449 | 98 | 22 | 87.3 | 141.6 | 2 (1) | 259 |
| 294 | 444450 | B | Gammaproteobacteria | Escherichia coli O157:H7 str. EC4115 | 2008-10-08 | 2008-10-10 | 5,704,171 | 5,477 | 110 | 22 | 83.0 | 133.8 | 3 (1) | 27739 |
| 295 | 386585 | B | Gammaproteobacteria | Escherichia coli O157:H7 str. Sakai | 2000-03-29 | 2008-07-28 | 5,594,477 | 5,447 | 105 | 22 | 87.7 | 144.0 | 3 (1) | 226 |
| 296 | 585035 | B | Gammaproteobacteria | Escherichia coli S88 | 2008-12-18 | 2009-02-18 | 5,032,268 | 4,847 | 91 | 22 | 87.2 | 144.5 | 1 (1) | 33375 |
| 297 | 409438 | B | Gammaproteobacteria | Escherichia coli SE11 | 2008-10-22 | 2008-10-23 | 5,155,626 | 5,002 | 86 | 21 | 88.4 | 146.8 | 7 (1) | 18057 |
| 298 | 439855 | B | Gammaproteobacteria | Escherichia coli SMS-3-5 | 2008-03-20 | 2008-10-01 | 5,215,377 | 4,913 | 90 | 22 | 87.0 | 148.0 | 5 (1) | 19469 |
| 299 | 316385 | B | Gammaproteobacteria | Escherichia coli str. K-12 substr. DH10B | 2008-03-14 | 2009-02-18 | 4,686,137 | 4,200 | 86 | 22 | 83.0 | 147.1 | 1 (1) | 20079 |
| 300 | 511145 | B | Gammaproteobacteria | Escherichia coli str. K-12 substr. MG1655 | 1997-09-05 | 2009-02-18 | 4,639,675 | 4,294 | 89 | 22 | 85.0 | 130.9 | 1 (1) | 225 |
| 301 | 316407 | B | Gammaproteobacteria | Escherichia coli str. K-12 substr. W3110 | 2006-01-23 | 2009-02-19 | 4,646,332 | 4,337 | 86 | 22 | 86.5 | 135.2 | 1 (1) | 16351 |
| 302 | 585056 | B | Gammaproteobacteria | Escherichia coli UMN026 | 2008-12-18 | 2009-02-18 | 5,324,391 | 5,058 | 88 | 22 | 87.5 | 147.2 | 2 (1) | 33415 |
| 303 | 364106 | B | Gammaproteobacteria | Escherichia coli UTI89 | 2006-04-05 | 2008-07-28 | 5,179,971 | 5,211 | 88 | 22 | 90.6 | 146.2 | 2 (1) | 16259 |
| 304 | 585054 | B | Gammaproteobacteria | Escherichia fergusonii ATCC 35469 | 2008-12-18 | 2009-03-13 | 4,588,711 | 4,319 | 87 | 22 | 88.9 | 150.9 | 1 (1) | 33369 |
| 305 | 262543 | B | Firmicutes | Exiguobacterium sibiricum 255-15 | 2008-04-03 | 2008-07-21 | 3,040,786 | 3,015 | 69 | 27 | 87.5 | 129.5 | 3 (1) | 10649 |
| 306 | 381764 | B | Thermotogae | Fervidobacterium nodosum Rt17-B1 | 2007-07-30 | 2008-07-28 | 1,948,941 | 1,750 | 50 | 6 | 90.1 | 157.6 | 1 (1) | 16719 |
| 307 | 334413 | B | Firmicutes | Finegoldia magna ATCC 29328 | 2008-02-14 | 2009-03-20 | 1,986,740 | 1,813 | 48 | 12 | 90.1 | 156.6 | 2 (1) | 18981 |
| 308 | 376686 | B | Bacteroidetes/Chlorobi | Flavobacterium johnsoniae UW101 | 2007-05-01 | 2008-07-28 | 6,096,872 | 5,017 | 62 | 18 | 87.1 | 151.7 | 1 (1) | 16082 |
| 309 | 402612 | B | Bacteroidetes/Chlorobi | Flavobacterium psychrophilum JIP02/86 | 2007-06-25 | 2008-07-29 | 2,861,988 | 2,432 | 49 | 18 | 84.6 | 107.1 | 1 (1) | 19979 |
| 310 | 401614 | B | Gammaproteobacteria | Francisella novicida U112 | 2006-11-28 | 2008-07-29 | 1,910,031 | 1,719 | 38 | 10 | 89.2 | 157.9 | 1 (1) | 16088 |
| 311 | 484022 | B | Gammaproteobacteria | Francisella philomiragia subsp. philomiragia ATCC 25017 | 2008-02-11 | 2008-07-30 | 2,049,711 | 1,915 | 39 | 9 | 90.8 | 142.6 | 2 (1) | 27853 |
| 312 | 119857 | B | Gammaproteobacteria | Francisella tularensis subsp. holarctica | 2006-03-02 | 2009-01-06 | 1,895,994 | 1,967 | 38 | 9 | 82.1 | 127.3 | 1 (1) | 16421 |
| 313 | 458234 | B | Gammaproteobacteria | Francisella tularensis subsp. holarctica FTNF002-00 | 2007-08-23 | 2008-07-30 | 1,890,909 | 1,580 | 38 | 10 | 76.1 | 134.9 | 1 (1) | 20197 |
| 314 | 393011 | B | Gammaproteobacteria | Francisella tularensis subsp. holarctica OSU18 | 2006-09-20 | 2009-01-06 | 1,895,727 | 1,555 | 38 | 10 | 74.4 | 120.7 | 1 (1) | 17265 |
| 315 | 441952 | B | Gammaproteobacteria | Francisella tularensis subsp. mediasiatica FSC147 | 2008-05-07 | 2009-01-27 | 1,893,886 | 1,406 | 38 | 9 | 71.7 | 136.3 | 1 (1) | 19571 |
| 316 | 393115 | B | Gammaproteobacteria | Francisella tularensis subsp. tularensis FSC198 | 2006-07-12 | 2008-07-28 | 1,892,616 | 1,804 | 38 | 10 | 79.0 | 124.8 | 1 (1) | 17375 |
| 317 | 177416 | B | Gammaproteobacteria | Francisella tularensis subsp. tularensis SCHU S4 | 2004-12-17 | 2009-01-06 | 1,892,819 | 1,804 | 38 | 10 | 78.8 | 124.4 | 1 (1) | 9 |
| 318 | 418136 | B | Gammaproteobacteria | Francisella tularensis subsp. tularensis WY96-3418 | 2007-03-24 | 2008-07-29 | 1,898,476 | 1,634 | 38 | 10 | 79.8 | 133.3 | 1 (1) | 18459 |
| 319 | 326424 | B | Actinobacteria | Frankia alni ACN14a | 2006-08-03 | 2008-07-25 | 7,497,934 | 6,723 | 46 | 6 | 86.3 | 158.2 | 1 (1) | 17403 |
| 320 | 106370 | B | Actinobacteria | Frankia sp. CcI3 | 2006-02-06 | 2008-07-18 | 5,433,628 | 4,499 | 46 | 6 | 84.7 | 159.3 | 1 (1) | 13963 |
| 321 | 298653 | B | Actinobacteria | Frankia sp. EAN1pec | 2007-10-10 | 2008-07-23 | 8,982,042 | 7,191 | 47 | 9 | 83.4 | 163.1 | 1 (1) | 13915 |
| 322 | 190304 | B | Fusobacteria | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | 2002-03-13 | 2008-07-19 | 2,174,500 | 2,067 | 47 | 15 | 88.8 | 150.8 | 1 (1) | 295 |
| 323 | 235909 | B | Firmicutes | Geobacillus kaustophilus HTA426 | 2004-12-04 | 2008-07-21 | 3,592,666 | 3,540 | 87 | 27 | 84.7 | 137.8 | 2 (1) | 13233 |
| 324 | 420246 | B | Firmicutes | Geobacillus thermodenitrificans NG80-2 | 2007-03-29 | 2008-07-29 | 3,608,012 | 3,445 | 87 | 30 | 83.5 | 139.3 | 2 (1) | 18655 |
| 325 | 404380 | B | Deltaproteobacteria | Geobacter bemidjiensis Bem | 2008-08-19 | 2008-08-21 | 4,615,150 | 4,018 | 58 | 14 | 86.8 | 145.5 | 1 (1) | 17707 |
| 326 | 398767 | B | Deltaproteobacteria | Geobacter lovleyi SZ | 2008-06-05 | 2008-09-22 | 3,994,874 | 3,685 | 45 | 6 | 91.5 | 145.4 | 2 (1) | 17423 |
| 327 | 269799 | B | Deltaproteobacteria | Geobacter metallireducens GS-15 | 2005-10-27 | 2009-01-27 | 4,011,182 | 3,532 | 50 | 6 | 90.5 | 163.2 | 2 (1) | 177 |
| 328 | 316067 | B | Deltaproteobacteria | Geobacter sp. FRC-32 | 2009-01-27 | 2009-01-27 | 4,304,501 | 3,798 | 49 | 8 | 89.6 | 148.7 | 1 (1) | 16263 |
| 329 | 243231 | B | Deltaproteobacteria | Geobacter sulfurreducens PCA | 2003-12-13 | 2009-01-21 | 3,814,139 | 3,447 | 49 | 6 | 89.6 | 161.0 | 1 (1) | 192 |
| 330 | 351605 | B | Deltaproteobacteria | Geobacter uraniireducens Rf4 | 2007-05-11 | 2008-07-27 | 5,136,364 | 4,357 | 49 | 6 | 86.7 | 151.0 | 1 (1) | 15768 |
| 331 | 251221 | B | Cyanobacteria | Gloeobacter violaceus PCC 7421 | 2003-11-19 | 2008-07-23 | 4,659,019 | 4,430 | 45 | 3 | 89.2 | 154.5 | 1 (1) | 9606 |
| 332 | 272568 | B | Alphaproteobacteria | Gluconacetobacter diazotrophicus PAl 5 | 2008-10-16 | 2008-10-16 | 3,914,947 | 3,501 | 55 | 12 | 87.9 | 142.5 | 2 (1) | 21071 |
| 333 | 272568 | B | Alphaproteobacteria | Gluconacetobacter diazotrophicus PAl 5 | 2007-12-05 | 2009-01-27 | 3,999,591 | 3,938 | 55 | 12 | 89.9 | 149.7 | 3 (1) | 377 |
| 334 | 290633 | B | Alphaproteobacteria | Gluconobacter oxydans 621H | 2005-01-24 | 2008-07-23 | 2,922,384 | 2,664 | 50 | 12 | 89.4 | 156.7 | 6 (1) | 13325 |
| 335 | 411154 | B | Bacteroidetes/Chlorobi | Gramella forsetii KT0803 | 2006-11-06 | 2008-07-29 | 3,798,465 | 3,584 | 44 | 9 | 90.2 | 156.2 | 1 (1) | 19061 |
| 336 | 391165 | B | Alphaproteobacteria | Granulibacter bethesdensis CGDNIH1 | 2006-09-13 | 2008-07-28 | 2,708,355 | 2,437 | 52 | 9 | 91.4 | 164.2 | 1 (1) | 17111 |
| 337 | 233412 | B | Gammaproteobacteria | Haemophilus ducreyi 35000HP | 2003-07-23 | 2008-09-22 | 1,698,955 | 1,717 | 45 | 19 | 84.8 | 129.0 | 1 (1) | 38 |
| 338 | 281310 | B | Gammaproteobacteria | Haemophilus influenzae 86-028NP | 2004-04-23 | 2008-07-23 | 1,914,490 | 1,793 | 58 | 19 | 86.6 | 141.9 | 1 (1) | 11752 |
| 339 | 374930 | B | Gammaproteobacteria | Haemophilus influenzae PittEE | 2007-06-07 | 2008-07-28 | 1,813,033 | 1,619 | 58 | 27 | 79.5 | 135.7 | 1 (1) | 16400 |
| 340 | 374931 | B | Gammaproteobacteria | Haemophilus influenzae PittGG | 2007-06-07 | 2008-07-28 | 1,887,192 | 1,667 | 55 | 31 | 75.1 | 127.1 | 1 (1) | 16401 |
| 341 | 71421 | B | Gammaproteobacteria | Haemophilus influenzae Rd KW20 | 1995-07-28 | 2008-07-18 | 1,830,138 | 1,709 | 18 | 18 | 85.4 | 144.3 | 1 (1) | 219 |
| 342 | 557723 | B | Gammaproteobacteria | Haemophilus parasuis SH0165 | 2009-01-07 | 2009-02-02 | 2,269,156 | 2,021 | 56 | 20 | 79.2 | 134.6 | 1 (1) | 31099 |
| 343 | 205914 | B | Gammaproteobacteria | Haemophilus somnus 129PT | 2006-08-22 | 2008-07-20 | 2,012,878 | 1,798 | 50 | 15 | 87.9 | 155.0 | 2 (1) | 322 |
| 344 | 228400 | B | Gammaproteobacteria | Haemophilus somnus 2336 | 2008-02-26 | 2008-07-21 | 2,263,857 | 1,980 | 48 | 16 | 87.1 | 147.7 | 1 (1) | 388 |
| 345 | 349521 | B | Gammaproteobacteria | Hahella chejuensis KCTC 2396 | 2005-12-14 | 2008-07-26 | 7,215,267 | 6,782 | 67 | 15 | 88.1 | 154.0 | 1 (1) | 16064 |
| 346 | 272569 | A | Euryarchaeota | Haloarcula marismortui ATCC 43049 | 2004-11-03 | 2008-07-22 | 4,274,642 | 4,240 | 50 | 10 | 84.4 | 136.1 | 9 (2) | 105 |
| 347 | 478009 | A | Euryarchaeota | Halobacterium salinarum R1 | 2008-02-12 | 2008-07-30 | 2,668,776 | 2,886 | 47 | 3 | 87.1 | 125.5 | 5 (1) | 106 |
| 348 | 64091 | A | Euryarchaeota | Halobacterium sp. NRC-1 | 2000-10-01 | 2008-07-18 | 2,571,010 | 2,605 | 47 | 4 | 85.2 | 133.3 | 3 (1) | 217 |
| 349 | 362976 | A | Euryarchaeota | Haloquadratum walsbyi DSM 16790 | 2006-06-22 | 2008-07-28 | 3,179,361 | 2,862 | 44 | 6 | 74.3 | 133.8 | 2 (1) | 17185 |
| 350 | 349124 | B | Gammaproteobacteria | Halorhodospira halophila SL1 | 2007-01-10 | 2008-07-26 | 2,678,452 | 2,407 | 46 | 6 | 91.4 | 150.1 | 1 (1) | 15767 |
| 351 | 416348 | A | Euryarchaeota | Halorubrum lacusprofundi ATCC 49239 | 2009-02-04 | 2009-02-04 | 3,692,576 | 3,560 | 51 | 9 | 83.9 | 132.2 | 3 (2) | 18455 |
| 352 | 373903 | B | Firmicutes | Halothermothrix orenii H 168 | 2009-01-13 | 2009-01-15 | 2,578,146 | 2,342 | 56 | 11 | 86.3 | 151.1 | 1 (1) | 16377 |
| 353 | 382638 | B | Epsilonproteobacteria | Helicobacter acinonychis str. Sheeba | 2006-06-28 | 2008-07-28 | 1,557,588 | 1,618 | 36 | 6 | 89.5 | 138.4 | 2 (1) | 17251 |
| 354 | 235279 | B | Epsilonproteobacteria | Helicobacter hepaticus ATCC 51449 | 2003-06-18 | 2008-07-21 | 1,799,146 | 1,875 | 37 | 3 | 93.0 | 144.6 | 1 (1) | 185 |
| 355 | 85962 | B | Epsilonproteobacteria | Helicobacter pylori 26695 | 1997-08-07 | 2008-09-22 | 1,667,867 | 1,566 | 36 | 7 | 89.3 | 150.0 | 1 (1) | 233 |
| 356 | 563041 | B | Epsilonproteobacteria | Helicobacter pylori G27 | 2008-10-03 | 2008-12-18 | 1,663,013 | 1,504 | 36 | 7 | 86.3 | 150.7 | 2 (1) | 31341 |
| 357 | 357544 | B | Epsilonproteobacteria | Helicobacter pylori HPAG1 | 2006-06-06 | 2009-01-29 | 1,605,736 | 1,544 | 36 | 6 | 91.5 | 152.4 | 2 (1) | 16183 |
| 358 | 85963 | B | Epsilonproteobacteria | Helicobacter pylori J99 | 1999-01-29 | 2008-07-18 | 1,643,831 | 1,491 | 0 | 0 | 90.2 | 161.7 | 1 (1) | 234 |
| 359 | 570508 | B | Epsilonproteobacteria | Helicobacter pylori P12 | 2008-10-30 | 2009-03-24 | 1,684,038 | 1,578 | 36 | 6 | 89.4 | 152.4 | 2 (1) | 32291 |
| 360 | 512562 | B | Epsilonproteobacteria | Helicobacter pylori Shi470 | 2008-05-14 | 2008-10-10 | 1,608,548 | 1,569 | 36 | 6 | 88.8 | 144.1 | 1 (1) | 29045 |
| 361 | 498761 | B | Firmicutes | Heliobacterium modesticaldum Ice1 | 2008-02-11 | 2008-07-30 | 3,075,407 | 3,000 | 104 | 25 | 85.9 | 139.7 | 1 (1) | 13427 |
| 362 | 204773 | B | Betaproteobacteria | Herminiimonas arsenicoxydans | 2007-03-16 | 2008-12-31 | 3,424,307 | 3,294 | 45 | 6 | 88.2 | 149.3 | 1 (1) | 13467 |
| 363 | 316274 | B | Chloroflexi | Herpetosiphon aurantiacus ATCC 23779 | 2007-11-13 | 2008-07-24 | 6,785,430 | 5,278 | 51 | 15 | 87.2 | 168.2 | 3 (1) | 16523 |
| 364 | 380749 | B | Aquificae | Hydrogenobaculum sp. Y04AAS1 | 2008-08-06 | 2008-09-22 | 1,559,514 | 1,629 | 45 | 6 | 94.9 | 136.2 | 1 (1) | 18891 |
| 365 | 415426 | A | Crenarchaeota | Hyperthermus butylicus DSM 5456 | 2007-01-22 | 2008-07-29 | 1,667,163 | 1,602 | 46 | 4 | 80.9 | 134.3 | 1 (1) | 208 |
| 366 | 228405 | B | Alphaproteobacteria | Hyphomonas neptunium ATCC 15444 | 2006-09-18 | 2008-07-21 | 3,705,021 | 3,505 | 43 | 3 | 90.3 | 155.8 | 1 (1) | 15721 |
| 367 | 283942 | B | Gammaproteobacteria | Idiomarina loihiensis L2TR | 2004-12-02 | 2008-07-23 | 2,839,318 | 2,628 | 56 | 12 | 91.9 | 160.2 | 1 (1) | 10790 |
| 368 | 453591 | A | Crenarchaeota | Ignicoccus hospitalis KIN4/I | 2007-08-29 | 2008-12-15 | 1,297,538 | 1,434 | 44 | 4 | 92.3 | 125.9 | 1 (1) | 13914 |
| 369 | 290400 | B | Alphaproteobacteria | Jannaschia sp. CCS1 | 2006-02-27 | 2008-07-23 | 4,404,049 | 4,283 | 42 | 3 | 90.4 | 151.3 | 2 (1) | 12733 |
| 370 | 375286 | B | Betaproteobacteria | Janthinobacterium sp. Marseille | 2007-07-06 | 2008-07-28 | 4,110,251 | 3,697 | 46 | 6 | 89.1 | 162.2 | 1 (1) | 16549 |
| 371 | 266940 | B | Actinobacteria | Kineococcus radiotolerans SRS30216 | 2007-07-10 | 2008-07-22 | 4,956,672 | 4,681 | 49 | 12 | 90.2 | 153.9 | 3 (1) | 10689 |
| 372 | 507522 | B | Gammaproteobacteria | Klebsiella pneumoniae 342 | 2008-09-24 | 2008-09-24 | 5,920,257 | 5,768 | 88 | 25 | 87.1 | 144.5 | 3 (1) | 28471 |
| 373 | 272620 | B | Gammaproteobacteria | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 2007-07-05 | 2009-01-22 | 5,694,894 | 5,185 | 86 | 25 | 85.3 | 150.9 | 6 (1) | 31 |
| 374 | 378753 | B | Actinobacteria | Kocuria rhizophila DC2201 | 2008-04-17 | 2008-07-28 | 2,697,540 | 2,357 | 46 | 9 | 88.4 | 163.0 | 1 (1) | 27833 |
| 375 | 272621 | B | Firmicutes | Lactobacillus acidophilus NCFM | 2005-01-31 | 2008-07-22 | 1,993,560 | 1,862 | 61 | 13 | 88.2 | 112.9 | 1 (1) | 82 |
| 376 | 387344 | B | Firmicutes | Lactobacillus brevis ATCC 367 | 2006-10-13 | 2008-07-30 | 2,340,228 | 2,218 | 65 | 16 | 83.4 | 136.3 | 3 (1) | 404 |
| 377 | 321967 | B | Firmicutes | Lactobacillus casei ATCC 334 | 2006-10-13 | 2008-08-26 | 2,924,325 | 2,771 | 59 | 16 | 81.9 | 135.7 | 2 (1) | 402 |
| 378 | 543734 | B | Firmicutes | Lactobacillus casei BL23 | 2008-06-19 | 2008-09-22 | 3,079,196 | 3,044 | 0 | 0 | 84.8 | 142.2 | 1 (1) | 30359 |
| 379 | 390333 | B | Firmicutes | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 | 2006-05-26 | 2008-07-28 | 1,864,998 | 2,096 | 95 | 27 | 73.2 | 101.7 | 1 (1) | 16871 |
| 380 | 321956 | B | Firmicutes | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | 2006-10-13 | 2008-07-25 | 1,856,951 | 1,721 | 98 | 28 | 76.9 | 119.9 | 1 (1) | 403 |
| 381 | 334390 | B | Firmicutes | Lactobacillus fermentum IFO 3956 | 2008-04-15 | 2008-07-25 | 2,098,685 | 1,843 | 54 | 15 | 80.2 | 145.5 | 1 (1) | 18979 |
| 382 | 324831 | B | Firmicutes | Lactobacillus gasseri ATCC 33323 | 2006-10-13 | 2008-07-25 | 1,894,360 | 1,755 | 78 | 19 | 88.2 | 145.5 | 1 (1) | 84 |
| 383 | 405566 | B | Firmicutes | Lactobacillus helveticus DPC 4571 | 2007-11-15 | 2008-07-29 | 2,080,931 | 1,610 | 61 | 12 | 73.6 | 136.0 | 1 (1) | 17811 |
| 384 | 257314 | B | Firmicutes | Lactobacillus johnsonii NCC 533 | 2004-02-18 | 2008-07-21 | 1,992,676 | 1,821 | 79 | 18 | 89.0 | 152.0 | 1 (1) | 9638 |
| 385 | 220668 | B | Firmicutes | Lactobacillus plantarum WCFS1 | 2003-02-05 | 2008-07-20 | 3,348,625 | 3,101 | 70 | 15 | 83.4 | 145.0 | 4 (1) | 356 |
| 386 | 557436 | B | Firmicutes | Lactobacillus reuteri DSM 20016 | 2007-06-01 | 2009-03-13 | 1,999,618 | 1,900 | 68 | 18 | 85.0 | 133.6 | 1 (1) | 15766 |
| 387 | 557433 | B | Firmicutes | Lactobacillus reuteri JCM 1112 | 2008-04-15 | 2008-11-14 | 2,039,414 | 1,820 | 63 | 18 | 83.3 | 147.8 | 1 (1) | 19011 |
| 388 | 314315 | B | Firmicutes | Lactobacillus sakei subsp. sakei 23K | 2005-11-02 | 2008-07-24 | 1,884,661 | 1,885 | 63 | 21 | 87.0 | 88.7 | 1 (1) | 13435 |
| 389 | 362948 | B | Firmicutes | Lactobacillus salivarius UCC118 | 2006-03-30 | 2008-07-28 | 2,133,977 | 2,014 | 78 | 21 | 82.5 | 131.0 | 4 (1) | 13280 |
| 390 | 416870 | B | Firmicutes | Lactococcus lactis subsp. cremoris MG1363 | 2007-02-06 | 2008-07-29 | 2,529,478 | 2,516 | 62 | 7 | 82.1 | 133.2 | 1 (1) | 18797 |
| 391 | 272622 | B | Firmicutes | Lactococcus lactis subsp. cremoris SK11 | 2006-10-13 | 2008-07-23 | 2,598,348 | 2,504 | 62 | 20 | 80.1 | 125.6 | 6 (1) | 401 |
| 392 | 272623 | B | Firmicutes | Lactococcus lactis subsp. lactis Il1403 | 2001-05-05 | 2008-07-22 | 2,365,589 | 2,266 | 0 | 0 | 84.4 | 144.6 | 1 (1) | 72 |
| 393 | 363253 | B | Deltaproteobacteria | Lawsonia intracellularis PHE/MN1-00 | 2006-05-05 | 2008-07-28 | 1,719,014 | 1,344 | 0 | 0 | 82.9 | 169.7 | 4 (1) | 183 |
| 394 | 400673 | B | Gammaproteobacteria | Legionella pneumophila str. Corby | 2007-05-24 | 2008-09-29 | 3,576,470 | 3,206 | 44 | 9 | 86.8 | 157.3 | 1 (1) | 17491 |
| 395 | 297245 | B | Gammaproteobacteria | Legionella pneumophila str. Lens | 2004-10-07 | 2008-07-23 | 3,405,519 | 3,004 | 43 | 9 | 86.8 | 154.2 | 2 (1) | 13126 |
| 396 | 297246 | B | Gammaproteobacteria | Legionella pneumophila str. Paris | 2004-10-07 | 2008-07-23 | 3,635,495 | 3,224 | 43 | 9 | 87.1 | 138.1 | 2 (1) | 13127 |
| 397 | 272624 | B | Gammaproteobacteria | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | 2004-09-28 | 2009-03-02 | 3,397,754 | 2,942 | 43 | 9 | 88.4 | 165.7 | 1 (1) | 22 |
| 398 | 281090 | B | Actinobacteria | Leifsonia xyli subsp. xyli str. CTCB07 | 2004-08-13 | 2008-07-23 | 2,584,158 | 2,030 | 45 | 3 | 69.9 | 133.9 | 1 (1) | 212 |
| 399 | 355278 | B | Spirochaetes | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 2008-02-13 | 2009-01-27 | 3,956,089 | 3,600 | 35 | 6 | 92.1 | 163.9 | 3 (2) | 16153 |
| 400 | 456481 | B | Spirochaetes | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 2008-02-13 | 2008-07-30 | 3,951,448 | 3,726 | 35 | 6 | 92.8 | 159.9 | 3 (2) | 20133 |
| 401 | 355277 | B | Spirochaetes | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 2006-10-13 | 2008-07-27 | 3,876,235 | 2,880 | 37 | 5 | 72.8 | 147.6 | 2 (2) | 16148 |
| 402 | 355276 | B | Spirochaetes | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 2006-10-13 | 2008-07-27 | 3,931,782 | 2,945 | 37 | 5 | 73.3 | 148.5 | 2 (2) | 16146 |
| 403 | 267671 | B | Spirochaetes | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 2004-03-19 | 2008-07-22 | 4,627,366 | 3,658 | 37 | 5 | 74.7 | 152.6 | 2 (2) | 10687 |
| 404 | 189518 | B | Spirochaetes | Leptospira interrogans serovar Lai str. 56601 | 2003-04-25 | 2009-01-21 | 4,691,184 | 4,725 | 37 | 4 | 78.0 | 126.0 | 2 (2) | 293 |
| 405 | 395495 | B | Betaproteobacteria | Leptothrix cholodnii SP-6 | 2008-03-25 | 2008-07-29 | 4,909,403 | 4,363 | 50 | 7 | 91.7 | 152.6 | 1 (1) | 20039 |
| 406 | 349519 | B | Firmicutes | Leuconostoc citreum KM20 | 2008-03-12 | 2008-07-26 | 1,896,614 | 1,823 | 70 | 12 | 88.3 | 143.0 | 5 (1) | 16062 |
| 407 | 203120 | B | Firmicutes | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 2006-10-13 | 2008-07-23 | 2,075,763 | 2,005 | 71 | 12 | 87.7 | 140.5 | 2 (1) | 315 |
| 408 | 272626 | B | Firmicutes | Listeria innocua Clip11262 | 2001-10-27 | 2008-07-22 | 3,093,113 | 3,061 | 66 | 18 | 88.7 | 89.5 | 2 (1) | 86 |
| 409 | 169963 | B | Firmicutes | Listeria monocytogenes EGD-e | 2001-10-27 | 2008-07-19 | 2,944,528 | 2,855 | 67 | 18 | 89.0 | 84.4 | 1 (1) | 276 |
| 410 | 552536 | B | Firmicutes | Listeria monocytogenes HCC23 | 2008-12-12 | 2008-12-15 | 2,976,212 | 2,974 | 67 | 18 | 88.4 | 143.1 | 1 (1) | 29409 |
| 411 | 265669 | B | Firmicutes | Listeria monocytogenes str. 4b F2365 | 2004-04-30 | 2008-07-22 | 2,905,187 | 2,821 | 67 | 18 | 88.2 | 144.9 | 1 (1) | 85 |
| 412 | 386043 | B | Firmicutes | Listeria welshimeri serovar 6b str. SLCC5334 | 2006-10-27 | 2008-07-28 | 2,814,130 | 2,780 | 66 | 18 | 88.2 | 143.7 | 1 (1) | 13443 |
| 413 | 444177 | B | Firmicutes | Lysinibacillus sphaericus C3-41 | 2008-02-27 | 2008-07-30 | 4,817,463 | 4,771 | 85 | 31 | 80.0 | 129.5 | 2 (1) | 19619 |
| 414 | 458233 | B | Firmicutes | Macrococcus caseolyticus JCSC5402 | 2009-01-28 | 2009-01-30 | 2,219,737 | 2,059 | 48 | 13 | 86.9 | 148.5 | 9 (1) | 20209 |
| 415 | 156889 | B | Other Bacteria | Magnetococcus sp. MC-1 | 2006-11-08 | 2008-07-18 | 4,719,581 | 3,716 | 45 | 9 | 86.3 | 166.6 | 1 (1) | 262 |
| 416 | 342108 | B | Alphaproteobacteria | Magnetospirillum magneticum AMB-1 | 2005-12-01 | 2008-07-25 | 4,967,148 | 4,559 | 0 | 4 | 88.1 | 159.4 | 1 (1) | 16217 |
| 417 | 221988 | B | Gammaproteobacteria | Mannheimia succiniciproducens MBEL55E | 2004-09-21 | 2008-09-24 | 2,314,078 | 2,384 | 60 | 19 | 89.6 | 139.6 | 1 (1) | 13068 |
| 418 | 394221 | B | Alphaproteobacteria | Maricaulis maris MCS10 | 2006-09-14 | 2008-07-28 | 3,368,780 | 3,063 | 45 | 6 | 89.7 | 142.9 | 1 (1) | 17333 |
| 419 | 351348 | B | Gammaproteobacteria | Marinobacter aquaeolei VT8 | 2006-12-28 | 2008-07-27 | 4,779,762 | 4,272 | 51 | 9 | 89.4 | 147.5 | 3 (1) | 13239 |
| 420 | 400668 | B | Gammaproteobacteria | Marinomonas sp. MWYL1 | 2007-07-05 | 2008-07-29 | 5,100,344 | 4,439 | 83 | 25 | 87.5 | 149.0 | 1 (1) | 17445 |
| 421 | 265311 | B | Firmicutes | Mesoplasma florum L1 | 2004-07-19 | 2008-07-22 | 793,224 | 683 | 29 | 0 | 92.7 | 169.0 | 1 (1) | 10650 |
| 422 | 266835 | B | Alphaproteobacteria | Mesorhizobium loti MAFF303099 | 2001-02-24 | 2008-07-22 | 7,596,297 | 7,281 | 50 | 6 | 86.0 | 148.0 | 3 (1) | 18 |
| 423 | 266779 | B | Alphaproteobacteria | Mesorhizobium sp. BNC1 | 2006-07-11 | 2008-07-22 | 4,935,185 | 4,543 | 52 | 6 | 88.7 | 142.0 | 4 (1) | 10690 |
| 424 | 399549 | A | Crenarchaeota | Metallosphaera sedula DSM 5348 | 2007-04-25 | 2008-07-29 | 2,191,517 | 2,256 | 42 | 2 | 87.7 | 131.8 | 1 (1) | 17447 |
| 425 | 420247 | A | Euryarchaeota | Methanobrevibacter smithii ATCC 35061 | 2007-06-04 | 2008-07-29 | 1,853,160 | 1,795 | 34 | 8 | 90.0 | 150.2 | 1 (1) | 18653 |
| 426 | 243232 | A | Euryarchaeota | Methanocaldococcus jannaschii DSM 2661 | 1996-08-23 | 2008-07-21 | 1,739,927 | 1,770 | 37 | 6 | 86.5 | 132.5 | 3 (2) | 102 |
| 427 | 259564 | A | Euryarchaeota | Methanococcoides burtonii DSM 6242 | 2006-04-10 | 2008-07-21 | 2,575,032 | 2,273 | 49 | 12 | 80.1 | 132.0 | 1 (1) | 9634 |
| 428 | 419665 | A | Euryarchaeota | Methanococcus aeolicus Nankai-3 | 2007-06-29 | 2008-07-30 | 1,569,500 | 1,490 | 37 | 8 | 84.0 | 135.8 | 1 (1) | 18641 |
| 429 | 402880 | A | Euryarchaeota | Methanococcus maripaludis C5 | 2007-03-15 | 2008-07-29 | 1,789,046 | 1,822 | 36 | 10 | 86.3 | 130.2 | 2 (1) | 17641 |
| 430 | 444158 | A | Euryarchaeota | Methanococcus maripaludis C6 | 2007-11-13 | 2008-07-30 | 1,744,193 | 1,826 | 36 | 10 | 87.3 | 128.3 | 1 (1) | 19639 |
| 431 | 426368 | A | Euryarchaeota | Methanococcus maripaludis C7 | 2007-06-29 | 2008-07-29 | 1,772,694 | 1,788 | 36 | 10 | 86.7 | 131.6 | 1 (1) | 18819 |
| 432 | 267377 | A | Euryarchaeota | Methanococcus maripaludis S2 | 2004-10-07 | 2008-07-22 | 1,661,137 | 1,722 | 38 | 10 | 88.6 | 119.7 | 1 (1) | 10632 |
| 433 | 406327 | A | Euryarchaeota | Methanococcus vannielii SB | 2007-06-29 | 2008-07-29 | 1,720,048 | 1,678 | 36 | 13 | 85.4 | 134.7 | 1 (1) | 17889 |
| 434 | 410358 | A | Euryarchaeota | Methanocorpusculum labreanum Z | 2007-02-01 | 2008-07-29 | 1,804,962 | 1,739 | 52 | 9 | 86.8 | 142.3 | 1 (1) | 18109 |
| 435 | 368407 | A | Euryarchaeota | Methanoculleus marisnigri JR1 | 2007-02-16 | 2008-07-28 | 2,478,101 | 2,489 | 48 | 3 | 87.1 | 132.4 | 1 (1) | 16330 |
| 436 | 190192 | A | Euryarchaeota | Methanopyrus kandleri AV19 | 2002-04-04 | 2008-07-19 | 1,694,969 | 1,691 | 35 | 3 | 88.7 | 145.2 | 1 (1) | 294 |
| 437 | 349307 | A | Euryarchaeota | Methanosaeta thermophila PT | 2006-10-25 | 2008-07-26 | 1,879,471 | 1,696 | 44 | 6 | 82.0 | 136.7 | 1 (1) | 15765 |
| 438 | 188937 | A | Euryarchaeota | Methanosarcina acetivorans C2A | 2002-04-05 | 2008-07-19 | 5,751,492 | 4,540 | 0 | 10 | 73.9 | 151.4 | 1 (1) | 290 |
| 439 | 269797 | A | Euryarchaeota | Methanosarcina barkeri str. Fusaro | 2005-08-12 | 2008-07-22 | 4,873,766 | 3,625 | 63 | 9 | 69.4 | 148.3 | 2 (1) | 103 |
| 440 | 192952 | A | Euryarchaeota | Methanosarcina mazei Go1 | 2002-07-20 | 2008-07-20 | 4,096,345 | 3,371 | 57 | 10 | 74.8 | 146.2 | 1 (1) | 300 |
| 441 | 339860 | A | Euryarchaeota | Methanosphaera stadtmanae DSM 3091 | 2006-01-05 | 2008-07-25 | 1,767,403 | 1,534 | 40 | 12 | 83.8 | 153.6 | 1 (1) | 15579 |
| 442 | 323259 | A | Euryarchaeota | Methanospirillum hungatei JF-1 | 2006-02-17 | 2008-07-25 | 3,544,738 | 3,139 | 51 | 14 | 85.8 | 145.9 | 1 (1) | 13015 |
| 443 | 187420 | A | Euryarchaeota | Methanothermobacter thermautotrophicus str. Delta H | 1997-11-26 | 2008-11-12 | 1,751,377 | 1,869 | 39 | 6 | 90.0 | 117.6 | 1 (1) | 289 |
| 444 | 481448 | B | Other Bacteria | Methylacidiphilum infernorum V4 | 2008-05-30 | 2008-09-22 | 2,287,145 | 2,472 | 46 | 3 | 90.5 | 135.3 | 1 (1) | 28995 |
| 445 | 420662 | B | Betaproteobacteria | Methylibium petroleiphilum PM1 | 2007-01-29 | 2008-10-30 | 4,643,639 | 4,449 | 69 | 0 | 91.2 | 154.4 | 2 (1) | 10789 |
| 446 | 265072 | B | Betaproteobacteria | Methylobacillus flagellatus KT | 2006-04-10 | 2008-07-22 | 2,971,517 | 2,753 | 46 | 6 | 89.9 | 156.8 | 1 (1) | 10647 |
| 447 | 440085 | B | Alphaproteobacteria | Methylobacterium chloromethanicum CM4 | 2008-12-19 | 2008-12-19 | 6,180,732 | 5,516 | 61 | 15 | 82.8 | 147.5 | 3 (1) | 19527 |
| 448 | 419610 | B | Alphaproteobacteria | Methylobacterium extorquens PA1 | 2007-12-20 | 2008-07-29 | 5,471,154 | 4,829 | 58 | 15 | 83.8 | 140.6 | 1 (1) | 18637 |
| 449 | 460265 | B | Alphaproteobacteria | Methylobacterium nodulans ORS 2060 | 2009-01-12 | 2009-01-15 | 8,839,022 | 8,309 | 73 | 21 | 80.1 | 124.4 | 8 (1) | 20477 |
| 450 | 441620 | B | Alphaproteobacteria | Methylobacterium populi BJ001 | 2008-04-09 | 2008-09-22 | 5,848,997 | 5,365 | 58 | 15 | 85.3 | 136.3 | 3 (1) | 19559 |
| 451 | 426355 | B | Alphaproteobacteria | Methylobacterium radiotolerans JCM 2831 | 2008-03-21 | 2008-07-29 | 6,899,110 | 6,431 | 60 | 19 | 85.0 | 132.1 | 9 (1) | 18817 |
| 452 | 426117 | B | Alphaproteobacteria | Methylobacterium sp. 4-46 | 2008-02-20 | 2008-07-29 | 7,737,025 | 6,692 | 63 | 18 | 81.2 | 135.5 | 3 (1) | 18809 |
| 453 | 395965 | B | Alphaproteobacteria | Methylocella silvestris BL2 | 2008-12-15 | 2008-12-17 | 4,305,430 | 3,818 | 49 | 6 | 85.0 | 140.4 | 1 (1) | 20635 |
| 454 | 243233 | B | Gammaproteobacteria | Methylococcus capsulatus str. Bath | 2004-09-24 | 2008-07-21 | 3,304,561 | 2,960 | 46 | 6 | 89.2 | 159.0 | 1 (1) | 21 |
| 455 | 449447 | B | Cyanobacteria | Microcystis aeruginosa NIES-843 | 2008-01-24 | 2008-09-18 | 5,842,795 | 6,311 | 42 | 6 | 81.1 | 123.7 | 1 (1) | 27835 |
| 456 | 264732 | B | Firmicutes | Moorella thermoacetica ATCC 39073 | 2005-12-12 | 2009-01-21 | 2,628,784 | 2,463 | 51 | 3 | 86.1 | 138.1 | 1 (1) | 10648 |
| 457 | 36809 | B | Actinobacteria | Mycobacterium abscessus | 2008-03-01 | 2008-11-19 | 5,090,491 | 4,941 | 47 | 3 | 92.3 | 156.3 | 2 (1) | 15691 |
| 458 | 243243 | B | Actinobacteria | Mycobacterium avium 104 | 2006-11-20 | 2008-07-21 | 5,475,491 | 5,120 | 46 | 3 | 88.4 | 153.5 | 1 (1) | 88 |
| 459 | 262316 | B | Actinobacteria | Mycobacterium avium subsp. paratuberculosis K-10 | 2004-01-30 | 2008-07-21 | 4,829,781 | 4,350 | 0 | 0 | 91.3 | 168.3 | 1 (1) | 91 |
| 460 | 233413 | B | Actinobacteria | Mycobacterium bovis AF2122/97 | 2003-06-06 | 2008-07-21 | 4,345,492 | 3,953 | 45 | 3 | 90.3 | 158.7 | 1 (1) | 89 |
| 461 | 410289 | B | Actinobacteria | Mycobacterium bovis BCG str. Pasteur 1173P2 | 2007-01-08 | 2008-11-25 | 4,374,522 | 3,988 | 47 | 3 | 90.5 | 157.7 | 1 (1) | 18059 |
| 462 | 350054 | B | Actinobacteria | Mycobacterium gilvum PYR-GCK | 2007-04-13 | 2008-07-26 | 5,982,829 | 5,579 | 47 | 6 | 91.7 | 149.7 | 4 (1) | 15760 |
| 463 | 561304 | B | Actinobacteria | Mycobacterium leprae Br4923 | 2009-01-11 | 2009-01-23 | 3,268,071 | 2,720 | 45 | 0 | 49.4 | 92.5 | 1 (1) | 31271 |
| 464 | 272631 | B | Actinobacteria | Mycobacterium leprae TN | 2001-03-10 | 2008-11-12 | 3,268,203 | 2,720 | 45 | 3 | 49.5 | 69.4 | 1 (1) | 90 |
| 465 | 216594 | B | Actinobacteria | Mycobacterium marinum M | 2008-04-15 | 2008-07-20 | 6,660,144 | 5,452 | 46 | 3 | 89.8 | 176.1 | 2 (1) | 16725 |
| 466 | 246196 | B | Actinobacteria | Mycobacterium smegmatis str. MC2 155 | 2006-11-20 | 2008-07-21 | 6,988,209 | 6,716 | 47 | 6 | 90.9 | 154.3 | 1 (1) | 92 |
| 467 | 164757 | B | Actinobacteria | Mycobacterium sp. JLS | 2007-02-27 | 2008-07-19 | 6,048,425 | 5,739 | 48 | 6 | 92.7 | 149.7 | 1 (1) | 16079 |
| 468 | 189918 | B | Actinobacteria | Mycobacterium sp. KMS | 2006-12-20 | 2008-07-19 | 6,256,079 | 5,975 | 48 | 6 | 92.1 | 147.4 | 3 (1) | 16081 |
| 469 | 164756 | B | Actinobacteria | Mycobacterium sp. MCS | 2006-06-09 | 2008-07-19 | 5,920,523 | 5,615 | 48 | 6 | 92.6 | 150.3 | 2 (1) | 15762 |
| 470 | 83331 | B | Actinobacteria | Mycobacterium tuberculosis CDC1551 | 2002-09-10 | 2008-07-18 | 4,403,837 | 4,189 | 0 | 0 | 90.4 | 155.4 | 1 (1) | 223 |
| 471 | 336982 | B | Actinobacteria | Mycobacterium tuberculosis F11 | 2007-06-07 | 2008-07-25 | 4,424,435 | 3,950 | 45 | 3 | 90.8 | 166.6 | 1 (1) | 15642 |
| 472 | 419947 | B | Actinobacteria | Mycobacterium tuberculosis H37Ra | 2007-05-31 | 2008-07-29 | 4,419,977 | 4,034 | 45 | 3 | 91.0 | 163.3 | 1 (1) | 18883 |
| 473 | 83332 | B | Actinobacteria | Mycobacterium tuberculosis H37Rv | 1998-06-20 | 2008-11-19 | 4,411,532 | 3,999 | 45 | 3 | 90.9 | 139.2 | 1 (1) | 224 |
| 474 | 362242 | B | Actinobacteria | Mycobacterium ulcerans Agy99 | 2006-12-01 | 2008-07-28 | 5,631,606 | 4,160 | 45 | 3 | 72.1 | 139.8 | 1 (1) | 16230 |
| 475 | 350058 | B | Actinobacteria | Mycobacterium vanbaalenii PYR-1 | 2006-12-27 | 2008-07-27 | 6,491,865 | 5,979 | 49 | 6 | 91.2 | 150.6 | 1 (1) | 15761 |
| 476 | 347257 | B | Firmicutes | Mycoplasma agalactiae PG2 | 2007-05-24 | 2008-11-19 | 877,438 | 751 | 34 | 6 | 87.4 | 162.5 | 1 (1) | 16095 |
| 477 | 243272 | B | Firmicutes | Mycoplasma arthritidis 158L3-1 | 2008-06-25 | 2008-09-22 | 820,453 | 631 | 32 | 3 | 88.3 | 177.0 | 1 (1) | 1422 |
| 478 | 340047 | B | Firmicutes | Mycoplasma capricolum subsp. capricolum ATCC 27343 | 2005-12-06 | 2008-07-25 | 1,010,023 | 812 | 30 | 6 | 88.1 | 170.1 | 1 (1) | 16208 |
| 479 | 233150 | B | Firmicutes | Mycoplasma gallisepticum R | 2003-09-02 | 2008-07-21 | 996,422 | 726 | 33 | 6 | 87.7 | 182.0 | 1 (1) | 409 |
| 480 | 243273 | B | Firmicutes | Mycoplasma genitalium G37 | 1995-10-20 | 2009-02-02 | 580,076 | 476 | 36 | 3 | 90.8 | 154.0 | 1 (1) | 97 |
| 481 | 295358 | B | Firmicutes | Mycoplasma hyopneumoniae 232 | 2004-10-19 | 2008-07-23 | 892,758 | 691 | 30 | 3 | 90.1 | 181.4 | 1 (1) | 13120 |
| 482 | 262722 | B | Firmicutes | Mycoplasma hyopneumoniae 7448 | 2005-08-08 | 2009-01-21 | 920,079 | 698 | 30 | 3 | 86.9 | 173.0 | 1 (1) | 10639 |
| 483 | 262719 | B | Firmicutes | Mycoplasma hyopneumoniae J | 2005-08-05 | 2009-01-02 | 897,405 | 674 | 30 | 3 | 87.9 | 176.5 | 1 (1) | 10675 |
| 484 | 267748 | B | Firmicutes | Mycoplasma mobile 163K | 2004-08-04 | 2008-07-22 | 777,079 | 635 | 28 | 3 | 90.8 | 169.6 | 1 (1) | 10697 |
| 485 | 272632 | B | Firmicutes | Mycoplasma mycoides subsp. mycoides SC str. PG1 | 2004-02-06 | 2008-07-22 | 1,211,703 | 1,016 | 30 | 6 | 81.6 | 140.2 | 1 (1) | 10616 |
| 486 | 272633 | B | Firmicutes | Mycoplasma penetrans HF-2 | 2002-12-06 | 2008-07-22 | 1,358,633 | 1,037 | 30 | 3 | 88.5 | 184.5 | 1 (1) | 176 |
| 487 | 272634 | B | Firmicutes | Mycoplasma pneumoniae M129 | 1996-11-15 | 2008-11-12 | 816,394 | 688 | 37 | 4 | 88.1 | 154.2 | 1 (1) | 99 |
| 488 | 272635 | B | Firmicutes | Mycoplasma pulmonis UAB CTIP | 2001-05-23 | 2008-07-22 | 963,879 | 782 | 29 | 3 | 90.4 | 175.7 | 1 (1) | 100 |
| 489 | 262723 | B | Firmicutes | Mycoplasma synoviae 53 | 2005-08-05 | 2009-01-02 | 799,476 | 681 | 34 | 7 | 89.0 | 155.8 | 1 (1) | 10676 |
| 490 | 246197 | B | Deltaproteobacteria | Myxococcus xanthus DK 1622 | 2006-06-07 | 2008-07-21 | 9,139,763 | 7,331 | 65 | 12 | 91.3 | 186.6 | 1 (1) | 1421 |
| 491 | 228908 | A | Nanoarchaeota | Nanoarchaeum equitans Kin4-M | 2003-10-21 | 2008-12-03 | 490,885 | 536 | 0 | 17 | 92.6 | 133.3 | 1 (1) | 9599 |
| 492 | 457570 | B | Firmicutes | Natranaerobius thermophilus JW/NM-WN-LF | 2008-04-09 | 2008-09-22 | 3,191,453 | 2,906 | 51 | 12 | 85.9 | 141.6 | 3 (1) | 20207 |
| 493 | 348780 | A | Euryarchaeota | Natronomonas pharaonis DSM 2160 | 2005-09-28 | 2008-07-25 | 2,749,696 | 2,843 | 46 | 3 | 89.8 | 140.3 | 3 (1) | 15742 |
| 494 | 598659 | B | Epsilonproteobacteria | Nautilia profundicola AmH | 2009-02-13 | 2009-02-27 | 1,676,444 | 1,730 | 46 | 12 | 93.0 | 143.9 | 1 (1) | 32573 |
| 495 | 242231 | B | Betaproteobacteria | Neisseria gonorrhoeae FA 1090 | 2005-02-14 | 2008-07-21 | 2,153,922 | 2,002 | 0 | 0 | 78.3 | 139.3 | 1 (1) | 23 |
| 496 | 521006 | B | Betaproteobacteria | Neisseria gonorrhoeae NCCP11945 | 2008-07-09 | 2008-09-22 | 2,236,178 | 2,674 | 55 | 12 | 86.0 | 116.2 | 2 (1) | 29335 |
| 497 | 374833 | B | Betaproteobacteria | Neisseria meningitidis 053442 | 2007-12-03 | 2008-07-28 | 2,153,416 | 2,020 | 59 | 12 | 79.8 | 125.3 | 1 (1) | 16393 |
| 498 | 272831 | B | Betaproteobacteria | Neisseria meningitidis FAM18 | 2007-01-04 | 2008-07-22 | 2,194,961 | 1,975 | 0 | 0 | 80.0 | 146.9 | 1 (1) | 255 |
| 499 | 122586 | B | Betaproteobacteria | Neisseria meningitidis MC58 | 2000-03-10 | 2008-07-18 | 2,272,360 | 2,063 | 0 | 0 | 78.9 | 138.5 | 1 (1) | 251 |
| 500 | 122587 | B | Betaproteobacteria | Neisseria meningitidis Z2491 | 2000-04-13 | 2008-12-24 | 2,184,406 | 1,993 | 0 | 0 | 78.7 | 142.3 | 1 (1) | 252 |
| 501 | 222891 | B | Alphaproteobacteria | Neorickettsia sennetsu str. Miyayama | 2006-02-21 | 2008-07-20 | 859,006 | 932 | 33 | 3 | 87.4 | 126.4 | 1 (1) | 357 |
| 502 | 387092 | B | Epsilonproteobacteria | Nitratiruptor sp. SB155-2 | 2007-07-11 | 2008-07-28 | 1,877,931 | 1,857 | 45 | 9 | 93.8 | 151.5 | 1 (1) | 18963 |
| 503 | 323097 | B | Alphaproteobacteria | Nitrobacter hamburgensis X14 | 2006-04-11 | 2008-07-25 | 5,011,522 | 4,326 | 55 | 3 | 79.2 | 132.3 | 4 (1) | 13473 |
| 504 | 323098 | B | Alphaproteobacteria | Nitrobacter winogradskyi Nb-255 | 2005-09-12 | 2008-07-25 | 3,402,093 | 3,122 | 49 | 3 | 83.9 | 138.3 | 1 (1) | 13474 |
| 505 | 323261 | B | Gammaproteobacteria | Nitrosococcus oceani ATCC 19707 | 2005-10-04 | 2008-07-25 | 3,522,111 | 3,019 | 45 | 6 | 84.4 | 145.7 | 2 (1) | 13993 |
| 506 | 228410 | B | Betaproteobacteria | Nitrosomonas europaea ATCC 19718 | 2003-04-18 | 2008-07-21 | 2,812,094 | 2,575 | 41 | 4 | 85.4 | 123.5 | 1 (1) | 52 |
| 507 | 335283 | B | Betaproteobacteria | Nitrosomonas eutropha C91 | 2006-09-13 | 2008-07-28 | 2,781,824 | 2,551 | 41 | 3 | 85.4 | 135.9 | 3 (1) | 13913 |
| 508 | 436308 | A | Crenarchaeota | Nitrosopumilus maritimus SCM1 | 2007-11-15 | 2008-07-30 | 1,645,259 | 1,795 | 38 | 4 | 90.0 | 132.4 | 1 (1) | 19265 |
| 509 | 323848 | B | Betaproteobacteria | Nitrosospira multiformis ATCC 25196 | 2005-11-15 | 2008-12-18 | 3,234,309 | 2,805 | 43 | 3 | 85.1 | 144.5 | 4 (1) | 13912 |
| 510 | 247156 | B | Actinobacteria | Nocardia farcinica IFM 10152 | 2004-10-07 | 2008-07-21 | 6,292,344 | 5,946 | 53 | 9 | 90.0 | 155.8 | 3 (1) | 13117 |
| 511 | 196162 | B | Actinobacteria | Nocardioides sp. JS614 | 2006-12-18 | 2008-07-20 | 5,293,685 | 4,909 | 46 | 6 | 90.7 | 148.1 | 2 (1) | 12738 |
| 512 | 63737 | B | Cyanobacteria | Nostoc punctiforme PCC 73102 | 2008-04-24 | 2008-07-18 | 9,059,191 | 6,690 | 88 | 12 | 77.0 | 162.2 | 6 (1) | 216 |
| 513 | 103690 | B | Cyanobacteria | Nostoc sp. PCC 7120 | 2002-01-05 | 2008-07-18 | 7,211,789 | 6,132 | 67 | 12 | 82.0 | 157.4 | 7 (1) | 244 |
| 514 | 279238 | B | Alphaproteobacteria | Novosphingobium aromaticivorans DSM 12444 | 2006-02-10 | 2008-07-23 | 4,233,314 | 3,937 | 57 | 9 | 91.6 | 143.9 | 3 (1) | 204 |
| 515 | 221109 | B | Firmicutes | Oceanobacillus iheyensis HTE831 | 2001-12-26 | 2008-07-20 | 3,630,528 | 3,496 | 69 | 22 | 84.2 | 141.2 | 1 (1) | 284 |
| 516 | 439375 | B | Alphaproteobacteria | Ochrobactrum anthropi ATCC 49188 | 2007-07-12 | 2008-07-30 | 5,205,777 | 4,799 | 58 | 12 | 86.9 | 137.1 | 6 (2) | 19485 |
| 517 | 203123 | B | Firmicutes | Oenococcus oeni PSU-1 | 2006-10-13 | 2008-07-20 | 1,780,517 | 1,691 | 43 | 7 | 82.2 | 132.6 | 1 (1) | 317 |
| 518 | 504832 | B | Alphaproteobacteria | Oligotropha carboxidovorans OM5 | 2008-10-22 | 2008-10-22 | 3,745,629 | 3,722 | 45 | 3 | 87.2 | 143.7 | 1 (1) | 28805 |
| 519 | 262768 | B | Firmicutes | Onion yellows phytoplasma OY-M | 2003-12-09 | 2008-07-21 | 853,092 | 751 | 32 | 6 | 72.8 | 128.7 | 1 (1) | 9615 |
| 520 | 452637 | B | Other Bacteria | Opitutus terrae PB90-1 | 2008-04-08 | 2008-07-30 | 5,957,605 | 4,612 | 65 | 4 | 88.3 | 164.4 | 1 (1) | 19989 |
| 521 | 357244 | B | Alphaproteobacteria | Orientia tsutsugamushi str. Boryong | 2007-05-15 | 2008-07-27 | 2,127,051 | 2,179 | 34 | 3 | 48.6 | 77.3 | 1 (1) | 16180 |
| 522 | 334380 | B | Alphaproteobacteria | Orientia tsutsugamushi str. Ikeda | 2008-05-29 | 2008-11-19 | 2,008,987 | 1,967 | 34 | 3 | 74.7 | 107.3 | 1 (1) | 18983 |
| 523 | 435591 | B | Bacteroidetes/Chlorobi | Parabacteroides distasonis ATCC 8503 | 2007-06-27 | 2008-07-30 | 4,811,379 | 3,850 | 83 | 21 | 90.0 | 181.6 | 1 (1) | 13485 |
| 524 | 318586 | B | Alphaproteobacteria | Paracoccus denitrificans PD1222 | 2006-12-13 | 2008-07-24 | 5,236,194 | 5,077 | 43 | 6 | 90.5 | 138.8 | 3 (2) | 13020 |
| 525 | 402881 | B | Alphaproteobacteria | Parvibaculum lavamentivorans DS-1 | 2007-07-30 | 2008-07-29 | 3,914,745 | 3,636 | 45 | 2 | 89.9 | 144.9 | 1 (1) | 17639 |
| 526 | 272843 | B | Gammaproteobacteria | Pasteurella multocida subsp. multocida str. Pm70 | 2001-03-15 | 2008-07-22 | 2,257,487 | 2,014 | 0 | 0 | 88.8 | 164.9 | 1 (1) | 39 |
| 527 | 218491 | B | Gammaproteobacteria | Pectobacterium atrosepticum SCRI1043 | 2004-07-21 | 2008-07-20 | 5,064,019 | 4,492 | 76 | 22 | 85.7 | 82.8 | 1 (1) | 350 |
| 528 | 278197 | B | Firmicutes | Pediococcus pentosaceus ATCC 25745 | 2006-10-13 | 2008-07-23 | 1,832,387 | 1,755 | 55 | 16 | 87.6 | 142.6 | 1 (1) | 398 |
| 529 | 338963 | B | Deltaproteobacteria | Pelobacter carbinolicus DSM 2380 | 2005-10-12 | 2008-07-25 | 3,665,893 | 3,353 | 54 | 6 | 87.0 | 153.2 | 1 (1) | 13337 |
| 530 | 338966 | B | Deltaproteobacteria | Pelobacter propionicus DSM 2379 | 2006-11-30 | 2008-09-26 | 4,241,119 | 3,804 | 53 | 12 | 87.7 | 145.3 | 3 (1) | 13384 |
| 531 | 319225 | B | Bacteroidetes/Chlorobi | Pelodictyon luteolum DSM 273 | 2005-10-26 | 2008-07-24 | 2,364,842 | 2,083 | 48 | 6 | 88.9 | 151.9 | 1 (1) | 13012 |
| 532 | 324925 | B | Bacteroidetes/Chlorobi | Pelodictyon phaeoclathratiforme BU-1 | 2008-07-18 | 2008-09-22 | 3,018,238 | 2,707 | 49 | 9 | 85.3 | 140.4 | 1 (1) | 13011 |
| 533 | 370438 | B | Firmicutes | Pelotomaculum thermopropionicum SI | 2007-05-07 | 2009-03-20 | 3,025,375 | 2,920 | 51 | 6 | 86.1 | 145.1 | 1 (1) | 19023 |
| 534 | 403833 | B | Thermotogae | Petrotoga mobilis SJ95 | 2007-11-16 | 2008-07-29 | 2,169,548 | 1,898 | 48 | 6 | 88.8 | 151.0 | 1 (1) | 17679 |
| 535 | 450851 | B | Alphaproteobacteria | Phenylobacterium zucineum HLK1 | 2008-08-18 | 2008-08-21 | 4,379,231 | 3,854 | 42 | 3 | 88.3 | 163.8 | 2 (1) | 19931 |
| 536 | 298386 | B | Gammaproteobacteria | Photobacterium profundum SS9 | 2004-04-30 | 2008-07-23 | 6,403,280 | 5,480 | 164 | 45 | 81.3 | 151.4 | 3 (2) | 13128 |
| 537 | 243265 | B | Gammaproteobacteria | Photorhabdus luminescens subsp. laumondii TTO1 | 2003-10-07 | 2008-07-21 | 5,688,987 | 4,905 | 85 | 22 | 81.0 | 107.0 | 1 (1) | 9605 |
| 538 | 263820 | A | Euryarchaeota | Picrophilus torridus DSM 9790 | 2004-06-09 | 2008-10-09 | 1,545,895 | 1,535 | 44 | 3 | 91.5 | 150.1 | 1 (1) | 10641 |
| 539 | 365044 | B | Betaproteobacteria | Polaromonas naphthalenivorans CJ2 | 2007-01-04 | 2008-07-28 | 5,366,143 | 4,929 | 51 | 6 | 88.1 | 139.5 | 9 (1) | 13418 |
| 540 | 296591 | B | Betaproteobacteria | Polaromonas sp. JS666 | 2006-04-10 | 2008-07-23 | 5,898,676 | 5,453 | 44 | 3 | 87.2 | 139.6 | 3 (1) | 13121 |
| 541 | 312153 | B | Betaproteobacteria | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 | 2007-04-12 | 2008-12-02 | 2,159,490 | 2,077 | 38 | 3 | 92.5 | 140.9 | 1 (1) | 16679 |
| 542 | 452638 | B | Betaproteobacteria | Polynucleobacter necessarius subsp. necessarius STIR1 | 2008-03-28 | 2008-12-04 | 1,560,469 | 1,508 | 37 | 4 | 77.8 | 112.8 | 1 (1) | 19991 |
| 543 | 431947 | B | Bacteroidetes/Chlorobi | Porphyromonas gingivalis ATCC 33277 | 2008-05-20 | 2008-11-19 | 2,354,886 | 2,090 | 53 | 12 | 85.8 | 143.2 | 1 (1) | 19051 |
| 544 | 242619 | B | Bacteroidetes/Chlorobi | Porphyromonas gingivalis W83 | 2003-09-02 | 2008-07-23 | 2,343,476 | 1,909 | 53 | 12 | 82.3 | 156.2 | 1 (1) | 48 |
| 545 | 146891 | B | Cyanobacteria | Prochlorococcus marinus str. AS9601 | 2007-01-19 | 2009-01-29 | 1,669,886 | 1,921 | 38 | 3 | 90.6 | 126.7 | 1 (1) | 13548 |
| 546 | 93059 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9211 | 2007-11-13 | 2009-01-29 | 1,688,963 | 1,855 | 40 | 3 | 89.7 | 131.7 | 1 (1) | 13551 |
| 547 | 93060 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9215 | 2007-09-20 | 2009-01-29 | 1,738,790 | 1,983 | 36 | 3 | 89.1 | 125.1 | 1 (1) | 18633 |
| 548 | 167546 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9301 | 2007-03-05 | 2009-01-29 | 1,641,879 | 1,907 | 37 | 2 | 90.7 | 125.9 | 1 (1) | 15746 |
| 549 | 59922 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9303 | 2007-01-22 | 2009-01-29 | 2,682,675 | 2,997 | 43 | 6 | 84.6 | 121.7 | 1 (1) | 13496 |
| 550 | 74546 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9312 | 2005-11-02 | 2008-07-18 | 1,709,204 | 1,962 | 39 | 3 | 90.3 | 121.6 | 1 (1) | 13910 |
| 551 | 74547 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9313 | 2003-08-15 | 2008-07-18 | 2,410,873 | 2,273 | 44 | 8 | 81.6 | 125.7 | 1 (1) | 220 |
| 552 | 167542 | B | Cyanobacteria | Prochlorococcus marinus str. MIT 9515 | 2007-01-19 | 2009-01-29 | 1,704,176 | 1,906 | 37 | 3 | 88.3 | 127.3 | 1 (1) | 13617 |
| 553 | 167555 | B | Cyanobacteria | Prochlorococcus marinus str. NATL1A | 2007-01-22 | 2009-01-29 | 1,864,731 | 2,193 | 38 | 3 | 86.8 | 119.7 | 1 (1) | 15660 |
| 554 | 59920 | B | Cyanobacteria | Prochlorococcus marinus str. NATL2A | 2005-08-09 | 2009-01-29 | 1,842,899 | 2,163 | 38 | 3 | 87.3 | 114.9 | 1 (1) | 13911 |
| 555 | 167539 | B | Cyanobacteria | Prochlorococcus marinus subsp. marinus str. CCMP1375 | 2003-08-15 | 2008-07-19 | 1,751,080 | 1,882 | 40 | 3 | 88.5 | 132.6 | 1 (1) | 419 |
| 556 | 59919 | B | Cyanobacteria | Prochlorococcus marinus subsp. pastoris str. CCMP1986 | 2003-08-15 | 2008-07-17 | 1,657,990 | 1,936 | 37 | 4 | 90.0 | 107.8 | 1 (1) | 213 |
| 557 | 267747 | B | Actinobacteria | Propionibacterium acnes KPA171202 | 2004-08-03 | 2008-07-22 | 2,560,265 | 2,297 | 45 | 9 | 89.4 | 160.8 | 1 (1) | 12460 |
| 558 | 290512 | B | Bacteroidetes/Chlorobi | Prosthecochloris aestuarii DSM 271 | 2008-07-18 | 2008-09-22 | 2,579,695 | 2,327 | 46 | 3 | 87.3 | 142.9 | 2 (1) | 12749 |
| 559 | 529507 | B | Gammaproteobacteria | Proteus mirabilis HI4320 | 2008-04-03 | 2008-08-28 | 4,099,895 | 3,740 | 83 | 22 | 84.1 | 74.7 | 2 (1) | 12624 |
| 560 | 342610 | B | Gammaproteobacteria | Pseudoalteromonas atlantica T6c | 2006-06-28 | 2008-07-25 | 5,187,005 | 4,281 | 62 | 15 | 86.1 | 151.6 | 1 (1) | 13454 |
| 561 | 326442 | B | Gammaproteobacteria | Pseudoalteromonas haloplanktis TAC125 | 2005-10-03 | 2008-07-25 | 3,850,272 | 3,487 | 106 | 28 | 87.0 | 152.0 | 2 (2) | 15713 |
| 562 | 557722 | B | Gammaproteobacteria | Pseudomonas aeruginosa LESB58 | 2008-12-24 | 2008-12-29 | 6,601,757 | 5,965 | 67 | 13 | 88.3 | 159.5 | 1 (1) | 31101 |
| 563 | 381754 | B | Gammaproteobacteria | Pseudomonas aeruginosa PA7 | 2007-07-05 | 2008-07-28 | 6,588,339 | 6,286 | 63 | 12 | 89.3 | 153.8 | 1 (1) | 16720 |
| 564 | 208964 | B | Gammaproteobacteria | Pseudomonas aeruginosa PAO1 | 2000-09-13 | 2008-10-07 | 6,264,404 | 5,566 | 63 | 13 | 89.1 | 161.3 | 1 (1) | 331 |
| 565 | 208963 | B | Gammaproteobacteria | Pseudomonas aeruginosa UCBPP-PA14 | 2006-10-06 | 2008-07-20 | 6,537,648 | 5,892 | 59 | 13 | 89.1 | 162.1 | 1 (1) | 386 |
| 566 | 384676 | B | Gammaproteobacteria | Pseudomonas entomophila L48 | 2006-05-10 | 2008-07-28 | 5,888,780 | 5,168 | 78 | 22 | 88.6 | 164.0 | 1 (1) | 16800 |
| 567 | 220664 | B | Gammaproteobacteria | Pseudomonas fluorescens Pf-5 | 2005-06-30 | 2008-09-26 | 7,074,893 | 6,138 | 71 | 15 | 88.5 | 166.5 | 1 (1) | 327 |
| 568 | 205922 | B | Gammaproteobacteria | Pseudomonas fluorescens Pf0-1 | 2005-10-07 | 2008-09-18 | 6,438,405 | 5,736 | 73 | 19 | 89.7 | 148.5 | 1 (1) | 12 |
| 569 | 399739 | B | Gammaproteobacteria | Pseudomonas mendocina ymp | 2007-04-20 | 2008-07-29 | 5,072,807 | 4,594 | 67 | 12 | 89.2 | 143.3 | 1 (1) | 17457 |
| 570 | 351746 | B | Gammaproteobacteria | Pseudomonas putida F1 | 2007-05-31 | 2008-07-27 | 5,959,964 | 5,252 | 76 | 19 | 88.5 | 147.4 | 1 (1) | 13909 |
| 571 | 76869 | B | Gammaproteobacteria | Pseudomonas putida GB-1 | 2008-02-05 | 2008-07-18 | 6,078,430 | 5,409 | 74 | 22 | 89.2 | 147.2 | 1 (1) | 17629 |
| 572 | 160488 | B | Gammaproteobacteria | Pseudomonas putida KT2440 | 2003-01-22 | 2008-07-19 | 6,181,863 | 5,350 | 0 | 21 | 86.5 | 163.3 | 1 (1) | 267 |
| 573 | 379731 | B | Gammaproteobacteria | Pseudomonas stutzeri A1501 | 2007-04-20 | 2008-07-28 | 4,567,418 | 4,128 | 61 | 8 | 89.2 | 160.3 | 1 (1) | 16817 |
| 574 | 264730 | B | Gammaproteobacteria | Pseudomonas syringae pv. phaseolicola 1448A | 2005-08-01 | 2008-12-17 | 6,112,448 | 5,172 | 64 | 15 | 83.6 | 156.4 | 3 (1) | 12416 |
| 575 | 205918 | B | Gammaproteobacteria | Pseudomonas syringae pv. syringae B728a | 2005-05-12 | 2008-12-17 | 6,093,698 | 5,136 | 64 | 16 | 87.5 | 101.5 | 1 (1) | 323 |
| 576 | 223283 | B | Gammaproteobacteria | Pseudomonas syringae pv. tomato str. DC3000 | 2003-08-21 | 2008-12-17 | 6,538,260 | 5,614 | 63 | 15 | 85.0 | 158.3 | 3 (1) | 359 |
| 577 | 259536 | B | Gammaproteobacteria | Psychrobacter arcticus 273-4 | 2005-07-20 | 2008-07-21 | 2,650,701 | 2,147 | 49 | 12 | 80.4 | 159.4 | 1 (1) | 9633 |
| 578 | 335284 | B | Gammaproteobacteria | Psychrobacter cryohalolentis K5 | 2006-04-18 | 2008-07-25 | 3,101,097 | 2,511 | 48 | 12 | 82.7 | 152.6 | 2 (1) | 13920 |
| 579 | 349106 | B | Gammaproteobacteria | Psychrobacter sp. PRwf-1 | 2007-06-04 | 2008-07-26 | 2,995,049 | 2,385 | 57 | 15 | 82.7 | 154.1 | 3 (1) | 15759 |
| 580 | 357804 | B | Gammaproteobacteria | Psychromonas ingrahamii 37 | 2006-12-22 | 2008-07-27 | 4,559,598 | 3,545 | 86 | 30 | 77.4 | 143.2 | 1 (1) | 16187 |
| 581 | 178306 | A | Crenarchaeota | Pyrobaculum aerophilum str. IM2 | 2002-01-17 | 2008-07-19 | 2,222,430 | 2,605 | 36 | 3 | 88.5 | 120.8 | 1 (1) | 172 |
| 582 | 340102 | A | Crenarchaeota | Pyrobaculum arsenaticum DSM 13514 | 2007-04-16 | 2008-07-25 | 2,121,076 | 2,298 | 41 | 3 | 86.4 | 121.0 | 1 (1) | 15582 |
| 583 | 410359 | A | Crenarchaeota | Pyrobaculum calidifontis JCM 11548 | 2007-02-27 | 2008-07-29 | 2,009,313 | 2,149 | 22 | 3 | 90.4 | 129.1 | 1 (1) | 18111 |
| 584 | 384616 | A | Crenarchaeota | Pyrobaculum islandicum DSM 4184 | 2006-12-20 | 2008-07-28 | 1,826,402 | 1,978 | 45 | 3 | 86.9 | 122.0 | 1 (1) | 16743 |
| 585 | 272844 | A | Euryarchaeota | Pyrococcus abyssi GE5 | 2001-06-01 | 2009-01-21 | 1,768,562 | 1,784 | 46 | 5 | 92.2 | 243.6 | 2 (1) | 179 |
| 586 | 186497 | A | Euryarchaeota | Pyrococcus furiosus DSM 3638 | 1999-08-03 | 2008-07-23 | 1,908,256 | 2,065 | 46 | 4 | 91.4 | 136.0 | 1 (1) | 287 |
| 587 | 70601 | A | Euryarchaeota | Pyrococcus horikoshii OT3 | 1998-07-29 | 2008-07-18 | 1,738,505 | 2,061 | 46 | 3 | 98.1 | 132.5 | 1 (1) | 207 |
| 588 | 381666 | B | Betaproteobacteria | Ralstonia eutropha H16 | 2006-08-30 | 2008-07-28 | 7,416,678 | 6,626 | 58 | 15 | 87.4 | 154.2 | 3 (2) | 13603 |
| 589 | 264198 | B | Betaproteobacteria | Ralstonia eutropha JMP134 | 2005-08-10 | 2008-07-22 | 7,255,290 | 6,446 | 66 | 18 | 87.4 | 158.9 | 4 (2) | 10646 |
| 590 | 266264 | B | Betaproteobacteria | Ralstonia metallidurans CH34 | 2006-04-26 | 2008-07-22 | 6,913,352 | 6,319 | 62 | 12 | 88.5 | 142.7 | 4 (2) | 250 |
| 591 | 402626 | B | Betaproteobacteria | Ralstonia pickettii 12J | 2008-05-07 | 2008-09-22 | 5,325,729 | 4,952 | 55 | 9 | 87.9 | 138.0 | 3 (2) | 17631 |
| 592 | 267608 | B | Betaproteobacteria | Ralstonia solanacearum GMI1000 | 2002-02-02 | 2009-01-21 | 5,810,922 | 5,120 | 57 | 12 | 87.4 | 156.1 | 2 (1) | 13 |
| 593 | 288705 | B | Actinobacteria | Renibacterium salmoninarum ATCC 33209 | 2007-12-18 | 2008-07-23 | 3,155,250 | 3,507 | 45 | 6 | 90.0 | 132.5 | 1 (1) | 19227 |
| 594 | 347834 | B | Alphaproteobacteria | Rhizobium etli CFN 42 | 2006-02-01 | 2008-07-25 | 6,530,228 | 6,016 | 50 | 9 | 85.5 | 146.0 | 7 (1) | 13932 |
| 595 | 491916 | B | Alphaproteobacteria | Rhizobium etli CIAT 652 | 2008-06-19 | 2008-07-30 | 6,448,048 | 6,109 | 51 | 9 | 85.6 | 146.7 | 4 (1) | 28021 |
| 596 | 395492 | B | Alphaproteobacteria | Rhizobium leguminosarum bv. trifolii WSM2304 | 2008-10-16 | 2008-10-16 | 6,872,702 | 6,415 | 53 | 9 | 86.6 | 136.1 | 5 (1) | 20179 |
| 597 | 216596 | B | Alphaproteobacteria | Rhizobium leguminosarum bv. viciae 3841 | 2006-09-20 | 2008-07-20 | 7,751,309 | 7,285 | 52 | 9 | 86.4 | 89.8 | 7 (1) | 344 |
| 598 | 272943 | B | Alphaproteobacteria | Rhodobacter sphaeroides 2.4.1 | 2005-10-07 | 2008-07-22 | 4,603,060 | 4,242 | 54 | 8 | 87.0 | 148.7 | 7 (2) | 56 |
| 599 | 349102 | B | Alphaproteobacteria | Rhodobacter sphaeroides ATCC 17025 | 2007-04-20 | 2008-07-26 | 4,557,127 | 4,333 | 54 | 12 | 87.8 | 137.6 | 6 (1) | 15755 |
| 600 | 349101 | B | Alphaproteobacteria | Rhodobacter sphaeroides ATCC 17029 | 2007-02-23 | 2008-10-29 | 4,489,380 | 4,132 | 55 | 12 | 88.2 | 140.7 | 3 (2) | 15754 |
| 601 | 557760 | B | Alphaproteobacteria | Rhodobacter sphaeroides KD131 | 2009-01-22 | 2009-01-27 | 4,711,139 | 4,569 | 54 | 12 | 88.0 | 147.4 | 4 (2) | 31111 |
| 602 | 101510 | B | Actinobacteria | Rhodococcus jostii RHA1 | 2006-07-28 | 2008-12-23 | 9,702,737 | 9,145 | 52 | 12 | 89.4 | 156.0 | 4 (1) | 13693 |
| 603 | 338969 | B | Betaproteobacteria | Rhodoferax ferrireducens T118 | 2006-03-10 | 2008-07-25 | 4,969,784 | 4,418 | 45 | 6 | 89.3 | 148.1 | 2 (1) | 13908 |
| 604 | 243090 | B | Planctomycetes | Rhodopirellula baltica SH 1 | 2003-07-02 | 2008-07-21 | 7,145,576 | 7,325 | 76 | 3 | 96.8 | 153.5 | 1 (1) | 413 |
| 605 | 316055 | B | Alphaproteobacteria | Rhodopseudomonas palustris BisA53 | 2006-10-04 | 2008-07-24 | 5,505,494 | 4,878 | 48 | 6 | 85.6 | 144.3 | 1 (1) | 15751 |
| 606 | 316056 | B | Alphaproteobacteria | Rhodopseudomonas palustris BisB18 | 2006-03-21 | 2008-07-24 | 5,513,844 | 4,886 | 50 | 6 | 85.3 | 143.5 | 1 (1) | 15750 |
| 607 | 316057 | B | Alphaproteobacteria | Rhodopseudomonas palustris BisB5 | 2006-04-10 | 2008-07-24 | 4,892,717 | 4,397 | 51 | 6 | 86.6 | 148.1 | 1 (1) | 15749 |
| 608 | 258594 | B | Alphaproteobacteria | Rhodopseudomonas palustris CGA009 | 2004-01-06 | 2009-01-06 | 5,467,640 | 4,840 | 49 | 8 | 86.9 | 139.6 | 2 (1) | 57 |
| 609 | 316058 | B | Alphaproteobacteria | Rhodopseudomonas palustris HaA2 | 2006-02-06 | 2008-07-24 | 5,331,656 | 4,683 | 50 | 3 | 87.0 | 147.2 | 1 (1) | 15747 |
| 610 | 395960 | B | Alphaproteobacteria | Rhodopseudomonas palustris TIE-1 | 2008-06-23 | 2008-09-22 | 5,744,041 | 5,246 | 52 | 6 | 86.1 | 139.5 | 1 (1) | 20167 |
| 611 | 414684 | B | Alphaproteobacteria | Rhodospirillum centenum SW | 2008-10-24 | 2008-10-24 | 4,355,548 | 4,041 | 52 | 11 | 86.8 | 153.1 | 1 (1) | 18307 |
| 612 | 269796 | B | Alphaproteobacteria | Rhodospirillum rubrum ATCC 11170 | 2005-12-12 | 2008-07-22 | 4,406,557 | 3,841 | 55 | 12 | 88.1 | 152.3 | 2 (1) | 58 |
| 613 | 293614 | B | Alphaproteobacteria | Rickettsia akari str. Hartford | 2007-10-02 | 2008-07-23 | 1,231,060 | 1,259 | 32 | 2 | 75.6 | 118.5 | 1 (1) | 12953 |
| 614 | 391896 | B | Alphaproteobacteria | Rickettsia bellii OSU 85-389 | 2007-10-02 | 2008-07-28 | 1,528,980 | 1,476 | 33 | 2 | 80.0 | 133.6 | 1 (1) | 17237 |
| 615 | 336407 | B | Alphaproteobacteria | Rickettsia bellii RML369-C | 2006-04-05 | 2008-07-25 | 1,522,076 | 1,429 | 34 | 3 | 85.0 | 123.3 | 1 (1) | 13996 |
| 616 | 293613 | B | Alphaproteobacteria | Rickettsia canadensis str. McKiel | 2007-10-01 | 2008-07-23 | 1,159,772 | 1,093 | 33 | 2 | 74.4 | 125.8 | 1 (1) | 12952 |
| 617 | 272944 | B | Alphaproteobacteria | Rickettsia conorii str. Malish 7 | 2000-10-13 | 2008-07-22 | 1,268,755 | 1,374 | 33 | 3 | 80.5 | 96.6 | 1 (1) | 42 |
| 618 | 315456 | B | Alphaproteobacteria | Rickettsia felis URRWXCal2 | 2005-06-07 | 2008-07-24 | 1,587,240 | 1,512 | 33 | 3 | 83.4 | 112.4 | 3 (1) | 13884 |
| 619 | 416276 | B | Alphaproteobacteria | Rickettsia massiliae MTU5 | 2007-10-04 | 2008-07-29 | 1,376,184 | 980 | 33 | 3 | 69.6 | 103.6 | 2 (1) | 18271 |
| 620 | 272947 | B | Alphaproteobacteria | Rickettsia prowazekii str. Madrid E | 1998-11-21 | 2008-07-22 | 1,111,523 | 834 | 33 | 3 | 75.3 | 155.4 | 1 (1) | 43 |
| 621 | 452659 | B | Alphaproteobacteria | Rickettsia rickettsii str. Iowa | 2008-01-17 | 2008-07-30 | 1,268,175 | 1,384 | 34 | 3 | 76.2 | 109.3 | 1 (1) | 19943 |
| 622 | 392021 | B | Alphaproteobacteria | Rickettsia rickettsii str. Sheila Smith | 2007-10-02 | 2008-07-28 | 1,257,710 | 1,345 | 33 | 2 | 76.0 | 114.2 | 1 (1) | 9636 |
| 623 | 257363 | B | Alphaproteobacteria | Rickettsia typhi str. Wilmington | 2004-08-20 | 2008-07-21 | 1,111,496 | 838 | 33 | 3 | 75.3 | 153.2 | 1 (1) | 10679 |
| 624 | 383372 | B | Chloroflexi | Roseiflexus castenholzii DSM 13941 | 2007-08-23 | 2008-07-28 | 5,723,298 | 4,330 | 48 | 6 | 82.0 | 163.3 | 1 (1) | 13462 |
| 625 | 357808 | B | Chloroflexi | Roseiflexus sp. RS-1 | 2007-06-04 | 2008-07-27 | 5,801,598 | 4,517 | 48 | 6 | 84.9 | 164.9 | 1 (1) | 16190 |
| 626 | 375451 | B | Alphaproteobacteria | Roseobacter denitrificans OCh 114 | 2006-06-22 | 2008-07-28 | 4,331,234 | 4,144 | 38 | 3 | 89.3 | 152.1 | 5 (1) | 16426 |
| 627 | 266117 | B | Actinobacteria | Rubrobacter xylanophilus DSM 9941 | 2006-06-09 | 2008-07-22 | 3,225,748 | 3,140 | 46 | 3 | 91.6 | 142.6 | 1 (1) | 10670 |
| 628 | 246200 | B | Alphaproteobacteria | Ruegeria pomeroyi DSS-3 | 2004-12-17 | 2009-03-27 | 4,601,053 | 4,252 | 53 | 9 | 89.6 | 157.0 | 2 (1) | 281 |
| 629 | 292414 | B | Alphaproteobacteria | Ruegeria sp. TM1040 | 2006-05-22 | 2008-07-23 | 4,153,699 | 3,864 | 62 | 15 | 88.0 | 151.2 | 3 (1) | 13040 |
| 630 | 203122 | B | Gammaproteobacteria | Saccharophagus degradans 2-40 | 2006-03-17 | 2009-01-21 | 5,057,531 | 4,007 | 41 | 6 | 86.5 | 178.0 | 1 (1) | 316 |
| 631 | 405948 | B | Actinobacteria | Saccharopolyspora erythraea NRRL 2338 | 2007-03-21 | 2008-09-26 | 8,212,805 | 7,198 | 50 | 16 | 84.7 | 143.7 | 1 (1) | 18489 |
| 632 | 309807 | B | Bacteroidetes/Chlorobi | Salinibacter ruber DSM 13855 | 2005-12-20 | 2008-07-24 | 3,587,328 | 2,833 | 44 | 3 | 84.7 | 173.5 | 2 (1) | 16159 |
| 633 | 391037 | B | Actinobacteria | Salinispora arenicola CNS-205 | 2007-10-05 | 2008-07-28 | 5,786,361 | 4,917 | 52 | 9 | 85.9 | 162.0 | 1 (1) | 17109 |
| 634 | 369723 | B | Actinobacteria | Salinispora tropica CNB-440 | 2007-04-17 | 2008-07-28 | 5,183,331 | 4,536 | 50 | 9 | 88.0 | 154.2 | 1 (1) | 16342 |
| 635 | 41514 | B | Gammaproteobacteria | Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- | 2007-11-21 | 2008-09-23 | 4,600,800 | 4,510 | 83 | 19 | 86.8 | 138.1 | 1 (1) | 13030 |
| 636 | 454166 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Agona str. SL483 | 2008-08-22 | 2008-08-24 | 4,836,638 | 4,614 | 85 | 21 | 85.4 | 140.8 | 2 (1) | 20063 |
| 637 | 321314 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | 2005-04-01 | 2008-09-23 | 4,944,000 | 4,666 | 85 | 22 | 83.7 | 133.1 | 3 (1) | 9618 |
| 638 | 439851 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 | 2008-09-04 | 2008-09-05 | 4,917,459 | 4,617 | 83 | 21 | 82.7 | 136.8 | 2 (1) | 19467 |
| 639 | 550537 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 | 2008-09-25 | 2008-10-01 | 4,685,848 | 4,318 | 84 | 22 | 85.3 | 71.1 | 1 (1) | 30687 |
| 640 | 550538 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 | 2008-09-18 | 2008-09-19 | 4,658,697 | 4,274 | 75 | 0 | 79.7 | 69.2 | 1 (1) | 30689 |
| 641 | 454169 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 | 2008-07-24 | 2008-09-23 | 4,983,515 | 4,779 | 86 | 19 | 84.9 | 139.5 | 3 (1) | 20045 |
| 642 | 423368 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Newport str. SL254 | 2008-07-24 | 2008-09-22 | 5,007,719 | 4,805 | 86 | 22 | 85.2 | 139.9 | 3 (1) | 18747 |
| 643 | 554290 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 | 2008-08-19 | 2009-01-09 | 4,581,797 | 4,284 | 76 | 22 | 82.3 | 142.5 | 1 (1) | 30943 |
| 644 | 295319 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 | 2004-11-09 | 2008-09-23 | 4,585,229 | 4,093 | 82 | 22 | 82.3 | 142.2 | 1 (1) | 13086 |
| 645 | 272994 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 | 2007-11-30 | 2009-03-02 | 4,858,887 | 5,601 | 84 | 22 | 89.3 | 124.5 | 1 (1) | 27803 |
| 646 | 476213 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 | 2009-03-03 | 2009-03-05 | 4,888,494 | 4,640 | 82 | 22 | 83.8 | 140.7 | 2 (1) | 20993 |
| 647 | 439843 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 | 2008-07-30 | 2008-09-22 | 4,823,887 | 4,627 | 84 | 19 | 84.9 | 139.7 | 3 (1) | 19459 |
| 648 | 220341 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Typhi str. CT18 | 2001-10-26 | 2008-09-23 | 5,133,713 | 4,980 | 80 | 22 | 82.9 | 88.6 | 3 (1) | 236 |
| 649 | 209261 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 | 2003-03-20 | 2008-09-23 | 4,791,961 | 4,323 | 78 | 22 | 82.2 | 143.9 | 1 (1) | 371 |
| 650 | 99287 | B | Gammaproteobacteria | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | 2001-10-26 | 2008-10-09 | 4,951,371 | 4,554 | 85 | 22 | 86.8 | 99.6 | 2 (1) | 241 |
| 651 | 399741 | B | Gammaproteobacteria | Serratia proteamaculans 568 | 2007-09-18 | 2008-07-29 | 5,495,657 | 4,942 | 85 | 21 | 86.9 | 142.4 | 2 (1) | 17459 |
| 652 | 326297 | B | Gammaproteobacteria | Shewanella amazonensis SB2B | 2006-12-21 | 2008-07-25 | 4,306,142 | 3,645 | 101 | 25 | 87.9 | 147.7 | 1 (1) | 13385 |
| 653 | 325240 | B | Gammaproteobacteria | Shewanella baltica OS155 | 2007-02-20 | 2008-07-25 | 5,342,896 | 4,489 | 107 | 31 | 83.1 | 141.1 | 5 (1) | 13386 |
| 654 | 402882 | B | Gammaproteobacteria | Shewanella baltica OS185 | 2007-07-10 | 2008-07-29 | 5,312,910 | 4,394 | 106 | 31 | 83.5 | 143.9 | 2 (1) | 17643 |
| 655 | 399599 | B | Gammaproteobacteria | Shewanella baltica OS195 | 2007-11-21 | 2008-07-29 | 5,547,544 | 4,688 | 104 | 31 | 83.8 | 141.6 | 4 (1) | 13389 |
| 656 | 407976 | B | Gammaproteobacteria | Shewanella baltica OS223 | 2008-12-15 | 2008-12-15 | 5,358,884 | 4,441 | 0 | 31 | 83.0 | 142.8 | 4 (1) | 17985 |
| 657 | 318161 | B | Gammaproteobacteria | Shewanella denitrificans OS217 | 2006-04-10 | 2008-07-24 | 4,545,906 | 3,754 | 93 | 25 | 84.2 | 146.8 | 1 (1) | 13390 |
| 658 | 318167 | B | Gammaproteobacteria | Shewanella frigidimarina NCIMB 400 | 2006-09-14 | 2008-07-24 | 4,845,257 | 4,029 | 96 | 28 | 83.9 | 145.8 | 1 (1) | 13391 |
| 659 | 458817 | B | Gammaproteobacteria | Shewanella halifaxensis HAW-EB4 | 2008-02-07 | 2008-07-30 | 5,226,917 | 4,278 | 125 | 30 | 83.0 | 161.6 | 1 (1) | 20241 |
| 660 | 323850 | B | Gammaproteobacteria | Shewanella loihica PV-4 | 2007-03-07 | 2008-07-25 | 4,602,594 | 3,859 | 95 | 25 | 85.5 | 145.2 | 1 (1) | 13906 |
| 661 | 211586 | B | Gammaproteobacteria | Shewanella oneidensis MR-1 | 2002-10-09 | 2008-07-20 | 5,131,416 | 4,779 | 102 | 27 | 82.9 | 139.7 | 2 (1) | 335 |
| 662 | 398579 | B | Gammaproteobacteria | Shewanella pealeana ATCC 700345 | 2007-10-04 | 2008-07-29 | 5,174,581 | 4,241 | 143 | 34 | 83.2 | 161.0 | 1 (1) | 17415 |
| 663 | 225849 | B | Gammaproteobacteria | Shewanella piezotolerans WP3 | 2008-11-13 | 2008-11-13 | 5,396,476 | 4,933 | 89 | 25 | 84.5 | 149.7 | 1 (1) | 17675 |
| 664 | 319224 | B | Gammaproteobacteria | Shewanella putrefaciens CN-32 | 2007-04-20 | 2008-07-24 | 4,659,220 | 3,972 | 101 | 25 | 85.2 | 143.8 | 1 (1) | 13393 |
| 665 | 425104 | B | Gammaproteobacteria | Shewanella sediminis HAW-EB3 | 2007-09-18 | 2008-07-29 | 5,517,674 | 4,497 | 125 | 37 | 82.9 | 144.6 | 1 (1) | 18789 |
| 666 | 94122 | B | Gammaproteobacteria | Shewanella sp. ANA-3 | 2006-11-08 | 2008-07-23 | 5,251,146 | 4,360 | 103 | 27 | 85.5 | 159.9 | 2 (1) | 13905 |
| 667 | 60480 | B | Gammaproteobacteria | Shewanella sp. MR-4 | 2006-09-01 | 2008-07-18 | 4,706,287 | 3,924 | 101 | 27 | 85.5 | 145.9 | 1 (1) | 13904 |
| 668 | 60481 | B | Gammaproteobacteria | Shewanella sp. MR-7 | 2006-09-01 | 2008-07-18 | 4,799,109 | 4,014 | 103 | 27 | 85.3 | 145.3 | 2 (1) | 13903 |
| 669 | 351745 | B | Gammaproteobacteria | Shewanella sp. W3-18-1 | 2007-01-03 | 2008-07-27 | 4,708,380 | 4,044 | 100 | 25 | 85.0 | 142.8 | 1 (1) | 13902 |
| 670 | 392500 | B | Gammaproteobacteria | Shewanella woodyi ATCC 51908 | 2008-03-13 | 2008-07-28 | 5,935,403 | 4,880 | 126 | 32 | 84.9 | 145.6 | 1 (1) | 17455 |
| 671 | 344609 | B | Gammaproteobacteria | Shigella boydii CDC 3083-94 | 2008-05-05 | 2008-07-25 | 4,874,659 | 4,557 | 102 | 22 | 76.0 | 121.7 | 6 (1) | 15637 |
| 672 | 300268 | B | Gammaproteobacteria | Shigella boydii Sb227 | 2005-11-09 | 2009-01-22 | 4,646,520 | 4,290 | 91 | 22 | 80.1 | 130.1 | 2 (1) | 13146 |
| 673 | 300267 | B | Gammaproteobacteria | Shigella dysenteriae Sd197 | 2005-11-09 | 2009-02-02 | 4,560,911 | 4,508 | 85 | 22 | 76.9 | 113.7 | 3 (1) | 13145 |
| 674 | 198215 | B | Gammaproteobacteria | Shigella flexneri 2a str. 2457T | 2003-04-22 | 2008-07-20 | 4,599,354 | 4,073 | 98 | 22 | 77.3 | 126.4 | 1 (1) | 408 |
| 675 | 198214 | B | Gammaproteobacteria | Shigella flexneri 2a str. 301 | 2002-10-18 | 2008-07-20 | 4,828,821 | 4,705 | 97 | 22 | 79.8 | 124.9 | 2 (1) | 310 |
| 676 | 373384 | B | Gammaproteobacteria | Shigella flexneri 5 str. 8401 | 2006-07-21 | 2008-07-28 | 4,574,284 | 4,116 | 97 | 22 | 80.6 | 136.9 | 1 (1) | 16375 |
| 677 | 300269 | B | Gammaproteobacteria | Shigella sonnei Ss046 | 2005-08-29 | 2008-07-24 | 5,055,316 | 4,476 | 97 | 22 | 80.1 | 135.6 | 5 (1) | 13151 |
| 678 | 366394 | B | Alphaproteobacteria | Sinorhizobium medicae WSM419 | 2007-06-29 | 2008-07-28 | 6,817,576 | 6,213 | 53 | 9 | 85.3 | 136.6 | 4 (1) | 16304 |
| 679 | 266834 | B | Alphaproteobacteria | Sinorhizobium meliloti 1021 | 2001-07-28 | 2009-02-27 | 6,691,694 | 6,234 | 54 | 9 | 86.2 | 140.4 | 3 (1) | 19 |
| 680 | 343509 | B | Gammaproteobacteria | Sodalis glossinidius str. morsitans | 2006-01-10 | 2008-07-25 | 4,292,502 | 2,516 | 69 | 22 | 50.4 | 136.9 | 4 (1) | 16309 |
| 681 | 234267 | B | Acidobacteria | Solibacter usitatus Ellin6076 | 2006-10-16 | 2009-04-02 | 9,965,640 | 7,826 | 52 | 6 | 90.2 | 162.4 | 1 (1) | 12638 |
| 682 | 448385 | B | Deltaproteobacteria | Sorangium cellulosum So ce 56 | 2007-11-27 | 2009-01-29 | 13,033,779 | 9,384 | 60 | 12 | 86.6 | 193.6 | 1 (1) | 28111 |
| 683 | 392499 | B | Alphaproteobacteria | Sphingomonas wittichii RW1 | 2007-05-31 | 2008-07-28 | 5,915,246 | 5,345 | 48 | 6 | 91.0 | 150.0 | 3 (1) | 17343 |
| 684 | 317655 | B | Alphaproteobacteria | Sphingopyxis alaskensis RB2256 | 2006-05-18 | 2008-07-24 | 3,373,713 | 3,195 | 45 | 3 | 90.2 | 140.0 | 2 (1) | 13907 |
| 685 | 273036 | B | Firmicutes | Staphylococcus aureus RF122 | 2005-11-24 | 2008-07-23 | 2,742,531 | 2,589 | 60 | 16 | 80.5 | 136.9 | 1 (1) | 63 |
| 686 | 93062 | B | Firmicutes | Staphylococcus aureus subsp. aureus COL | 2005-01-13 | 2009-01-21 | 2,813,862 | 2,676 | 53 | 19 | 82.7 | 137.2 | 2 (1) | 238 |
| 687 | 359787 | B | Firmicutes | Staphylococcus aureus subsp. aureus JH1 | 2007-06-28 | 2008-07-27 | 2,936,936 | 2,780 | 60 | 19 | 83.3 | 131.8 | 2 (1) | 15758 |
| 688 | 359786 | B | Firmicutes | Staphylococcus aureus subsp. aureus JH9 | 2007-05-18 | 2008-07-27 | 2,937,129 | 2,726 | 59 | 19 | 83.0 | 133.9 | 2 (1) | 15757 |
| 689 | 282458 | B | Firmicutes | Staphylococcus aureus subsp. aureus MRSA252 | 2004-06-24 | 2008-07-23 | 2,902,619 | 2,744 | 60 | 16 | 81.5 | 78.6 | 1 (1) | 265 |
| 690 | 282459 | B | Firmicutes | Staphylococcus aureus subsp. aureus MSSA476 | 2004-06-24 | 2008-07-23 | 2,820,454 | 2,643 | 60 | 19 | 81.5 | 73.9 | 2 (1) | 266 |
| 691 | 418127 | B | Firmicutes | Staphylococcus aureus subsp. aureus Mu3 | 2007-09-03 | 2008-07-29 | 2,880,168 | 2,699 | 61 | 16 | 83.6 | 143.5 | 1 (1) | 18509 |
| 692 | 158878 | B | Firmicutes | Staphylococcus aureus subsp. aureus Mu50 | 2001-06-22 | 2008-07-19 | 2,903,636 | 2,733 | 60 | 16 | 83.5 | 142.1 | 2 (1) | 263 |
| 693 | 196620 | B | Firmicutes | Staphylococcus aureus subsp. aureus MW2 | 2002-06-05 | 2008-07-20 | 2,820,462 | 2,632 | 60 | 19 | 83.4 | 143.8 | 1 (1) | 306 |
| 694 | 158879 | B | Firmicutes | Staphylococcus aureus subsp. aureus N315 | 2001-06-22 | 2008-07-19 | 2,839,469 | 2,624 | 62 | 16 | 83.3 | 144.6 | 2 (1) | 264 |
| 695 | 93061 | B | Firmicutes | Staphylococcus aureus subsp. aureus NCTC 8325 | 2006-02-13 | 2008-07-18 | 2,821,361 | 2,892 | 61 | 16 | 84.7 | 133.6 | 1 (1) | 237 |
| 696 | 426430 | B | Firmicutes | Staphylococcus aureus subsp. aureus str. Newman | 2007-07-02 | 2008-11-19 | 2,878,897 | 2,614 | 56 | 16 | 83.2 | 147.8 | 1 (1) | 18801 |
| 697 | 451515 | B | Firmicutes | Staphylococcus aureus subsp. aureus USA300_FPR3757 | 2006-02-10 | 2009-04-06 | 2,917,469 | 2,604 | 53 | 16 | 81.8 | 146.5 | 4 (1) | 16313 |
| 698 | 451516 | B | Firmicutes | Staphylococcus aureus subsp. aureus USA300_TCH1516 | 2007-11-16 | 2008-07-30 | 2,899,956 | 2,683 | 60 | 16 | 79.9 | 136.2 | 2 (1) | 19489 |
| 699 | 396513 | B | Firmicutes | Staphylococcus carnosus subsp. carnosus TM300 | 2009-02-03 | 2009-03-23 | 2,566,424 | 2,462 | 60 | 15 | 85.6 | 143.5 | 1 (1) | 34811 |
| 700 | 176280 | B | Firmicutes | Staphylococcus epidermidis ATCC 12228 | 2003-09-03 | 2008-07-19 | 2,564,615 | 2,485 | 60 | 16 | 83.3 | 136.5 | 7 (1) | 279 |
| 701 | 176279 | B | Firmicutes | Staphylococcus epidermidis RP62A | 2005-01-18 | 2008-07-23 | 2,643,840 | 2,526 | 61 | 19 | 82.4 | 135.9 | 2 (1) | 64 |
| 702 | 279808 | B | Firmicutes | Staphylococcus haemolyticus JCSC1435 | 2005-06-30 | 2008-07-23 | 2,685,015 | 2,678 | 59 | 16 | 85.7 | 138.0 | 1 (1) | 12508 |
| 703 | 342451 | B | Firmicutes | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 2005-08-12 | 2008-07-25 | 2,577,899 | 2,514 | 60 | 20 | 83.3 | 138.1 | 3 (1) | 15596 |
| 704 | 399550 | A | Crenarchaeota | Staphylothermus marinus F1 | 2007-02-21 | 2008-10-29 | 1,570,485 | 1,570 | 40 | 3 | 86.9 | 133.5 | 1 (1) | 17449 |
| 705 | 522373 | B | Gammaproteobacteria | Stenotrophomonas maltophilia K279a | 2008-06-10 | 2008-06-20 | 4,851,126 | 4,430 | 0 | 0 | 88.6 | 74.5 | 1 (1) | 30351 |
| 706 | 391008 | B | Gammaproteobacteria | Stenotrophomonas maltophilia R551-3 | 2008-07-21 | 2008-09-22 | 4,573,969 | 4,039 | 73 | 13 | 89.2 | 143.6 | 1 (1) | 17107 |
| 707 | 208435 | B | Firmicutes | Streptococcus agalactiae 2603V/R | 2002-08-30 | 2008-07-20 | 2,160,267 | 2,124 | 80 | 16 | 86.2 | 136.4 | 1 (1) | 330 |
| 708 | 205921 | B | Firmicutes | Streptococcus agalactiae A909 | 2005-09-29 | 2008-07-20 | 2,127,839 | 1,996 | 80 | 21 | 85.9 | 142.3 | 1 (1) | 326 |
| 709 | 211110 | B | Firmicutes | Streptococcus agalactiae NEM316 | 2002-10-02 | 2008-07-20 | 2,211,485 | 2,134 | 80 | 21 | 87.7 | 89.9 | 1 (1) | 334 |
| 710 | 552526 | B | Firmicutes | Streptococcus equi subsp. zooepidemicus MGCS10565 | 2008-08-11 | 2008-09-30 | 2,024,171 | 1,893 | 57 | 15 | 82.7 | 139.5 | 1 (1) | 30781 |
| 711 | 467705 | B | Firmicutes | Streptococcus gordonii str. Challis substr. CH1 | 2007-09-11 | 2008-07-30 | 2,196,662 | 2,051 | 59 | 12 | 87.7 | 149.3 | 1 (1) | 66 |
| 712 | 210007 | B | Firmicutes | Streptococcus mutans UA159 | 2002-10-25 | 2008-07-20 | 2,030,921 | 1,960 | 65 | 15 | 85.6 | 139.6 | 1 (1) | 333 |
| 713 | 561276 | B | Firmicutes | Streptococcus pneumoniae ATCC 700669 | 2009-01-13 | 2009-01-23 | 2,221,315 | 2,135 | 58 | 12 | 82.6 | 66.2 | 1 (1) | 31233 |
| 714 | 516950 | B | Firmicutes | Streptococcus pneumoniae CGSP14 | 2008-04-11 | 2008-07-30 | 2,209,198 | 2,206 | 58 | 12 | 86.5 | 139.0 | 1 (1) | 29179 |
| 715 | 373153 | B | Firmicutes | Streptococcus pneumoniae D39 | 2006-10-12 | 2008-07-28 | 2,046,115 | 1,914 | 58 | 12 | 83.4 | 139.3 | 1 (1) | 16374 |
| 716 | 512566 | B | Firmicutes | Streptococcus pneumoniae G54 | 2008-07-22 | 2008-09-22 | 2,078,953 | 2,115 | 58 | 12 | 85.7 | 134.4 | 1 (1) | 29047 |
| 717 | 487214 | B | Firmicutes | Streptococcus pneumoniae Hungary19A-6 | 2008-02-27 | 2008-07-30 | 2,245,615 | 2,155 | 55 | 12 | 82.5 | 132.6 | 1 (1) | 28035 |
| 718 | 171101 | B | Firmicutes | Streptococcus pneumoniae R6 | 2001-09-07 | 2008-07-19 | 2,038,615 | 2,043 | 58 | 12 | 86.7 | 131.8 | 1 (1) | 278 |
| 719 | 170187 | B | Firmicutes | Streptococcus pneumoniae TIGR4 | 2001-07-21 | 2008-07-19 | 2,160,842 | 2,125 | 58 | 0 | 83.4 | 132.7 | 1 (1) | 277 |
| 720 | 160490 | B | Firmicutes | Streptococcus pyogenes M1 GAS | 2001-04-11 | 2008-07-19 | 1,852,441 | 1,696 | 60 | 12 | 83.5 | 140.9 | 1 (1) | 269 |
| 721 | 370552 | B | Firmicutes | Streptococcus pyogenes MGAS10270 | 2006-05-04 | 2008-07-28 | 1,928,252 | 1,987 | 63 | 18 | 87.2 | 133.9 | 1 (1) | 16364 |
| 722 | 286636 | B | Firmicutes | Streptococcus pyogenes MGAS10394 | 2004-07-24 | 2008-07-23 | 1,899,877 | 1,886 | 67 | 18 | 87.0 | 138.7 | 1 (1) | 12469 |
| 723 | 370554 | B | Firmicutes | Streptococcus pyogenes MGAS10750 | 2006-05-04 | 2008-09-22 | 1,937,111 | 1,979 | 63 | 18 | 87.2 | 135.1 | 1 (1) | 16366 |
| 724 | 370553 | B | Firmicutes | Streptococcus pyogenes MGAS2096 | 2006-05-04 | 2008-07-28 | 1,860,355 | 1,898 | 63 | 18 | 87.1 | 134.9 | 1 (1) | 16365 |
| 725 | 198466 | B | Firmicutes | Streptococcus pyogenes MGAS315 | 2002-07-18 | 2008-07-20 | 1,900,521 | 1,865 | 67 | 12 | 85.5 | 136.7 | 1 (1) | 311 |
| 726 | 293653 | B | Firmicutes | Streptococcus pyogenes MGAS5005 | 2005-08-05 | 2008-07-23 | 1,838,554 | 1,865 | 67 | 18 | 86.4 | 134.7 | 1 (1) | 13888 |
| 727 | 319701 | B | Firmicutes | Streptococcus pyogenes MGAS6180 | 2005-08-04 | 2008-07-24 | 1,897,573 | 1,894 | 65 | 18 | 86.8 | 137.4 | 1 (1) | 13887 |
| 728 | 186103 | B | Firmicutes | Streptococcus pyogenes MGAS8232 | 2002-03-28 | 2008-09-29 | 1,895,017 | 1,845 | 0 | 12 | 84.9 | 139.4 | 1 (1) | 286 |
| 729 | 370551 | B | Firmicutes | Streptococcus pyogenes MGAS9429 | 2006-05-04 | 2008-07-28 | 1,836,467 | 1,877 | 67 | 18 | 87.5 | 134.9 | 1 (1) | 16363 |
| 730 | 471876 | B | Firmicutes | Streptococcus pyogenes NZ131 | 2008-10-16 | 2008-10-16 | 1,815,785 | 1,703 | 66 | 18 | 84.6 | 140.6 | 1 (1) | 20707 |
| 731 | 193567 | B | Firmicutes | Streptococcus pyogenes SSI-1 | 2003-06-12 | 2008-07-20 | 1,894,275 | 1,861 | 57 | 10 | 84.6 | 136.4 | 1 (1) | 301 |
| 732 | 160491 | B | Firmicutes | Streptococcus pyogenes str. Manfredo | 2007-03-29 | 2008-07-19 | 1,841,271 | 1,819 | 66 | 18 | 83.4 | 70.2 | 1 (1) | 270 |
| 733 | 388919 | B | Firmicutes | Streptococcus sanguinis SK36 | 2007-02-09 | 2008-12-03 | 2,388,435 | 2,270 | 61 | 12 | 88.5 | 149.3 | 1 (1) | 13942 |
| 734 | 391295 | B | Firmicutes | Streptococcus suis 05ZYH33 | 2007-04-24 | 2008-07-28 | 2,096,309 | 2,186 | 56 | 12 | 87.4 | 134.5 | 1 (1) | 17153 |
| 735 | 391296 | B | Firmicutes | Streptococcus suis 98HAH33 | 2007-04-24 | 2008-07-28 | 2,095,698 | 2,189 | 56 | 12 | 87.5 | 134.5 | 1 (1) | 17155 |
| 736 | 299768 | B | Firmicutes | Streptococcus thermophilus CNRZ1066 | 2004-11-16 | 2008-07-24 | 1,796,226 | 1,915 | 0 | 0 | 83.7 | 129.8 | 1 (1) | 13163 |
| 737 | 322159 | B | Firmicutes | Streptococcus thermophilus LMD-9 | 2006-10-13 | 2008-07-25 | 1,864,178 | 1,716 | 67 | 19 | 76.6 | 122.3 | 3 (1) | 13773 |
| 738 | 264199 | B | Firmicutes | Streptococcus thermophilus LMG 18311 | 2004-11-15 | 2008-07-22 | 1,796,846 | 1,889 | 0 | 0 | 83.8 | 131.7 | 1 (1) | 13162 |
| 739 | 218495 | B | Firmicutes | Streptococcus uberis 0140J | 2009-01-28 | 2009-03-27 | 1,852,352 | 1,825 | 59 | 15 | 86.9 | 71.0 | 1 (1) | 353 |
| 740 | 227882 | B | Actinobacteria | Streptomyces avermitilis MA-4680 | 2001-09-27 | 2008-07-21 | 9,119,895 | 7,676 | 68 | 18 | 86.0 | 166.9 | 2 (1) | 189 |
| 741 | 100226 | B | Actinobacteria | Streptomyces coelicolor A3(2) | 1996-07-01 | 2008-09-26 | 9,054,847 | 8,215 | 65 | 18 | 88.4 | 98.2 | 3 (1) | 242 |
| 742 | 455632 | B | Actinobacteria | Streptomyces griseus subsp. griseus NBRC 13350 | 2008-04-08 | 2008-07-30 | 8,545,929 | 7,138 | 66 | 18 | 87.9 | 172.7 | 1 (1) | 20085 |
| 743 | 330779 | A | Crenarchaeota | Sulfolobus acidocaldarius DSM 639 | 2005-07-05 | 2008-07-25 | 2,225,959 | 2,223 | 49 | 2 | 85.2 | 133.7 | 1 (1) | 13935 |
| 744 | 273057 | A | Crenarchaeota | Sulfolobus solfataricus P2 | 2001-06-28 | 2008-07-23 | 2,992,245 | 2,995 | 46 | 4 | 84.4 | 137.8 | 1 (1) | 108 |
| 745 | 273063 | A | Crenarchaeota | Sulfolobus tokodaii str. 7 | 2001-09-27 | 2008-07-23 | 2,694,756 | 2,826 | 46 | 3 | 84.4 | 127.9 | 1 (1) | 246 |
| 746 | 436114 | B | Aquificae | Sulfurihydrogenibium sp. YO3AOP1 | 2008-05-21 | 2008-09-22 | 1,838,442 | 1,721 | 40 | 9 | 85.7 | 135.4 | 1 (1) | 18889 |
| 747 | 326298 | B | Epsilonproteobacteria | Sulfurimonas denitrificans DSM 1251 | 2005-11-01 | 2008-07-25 | 2,201,561 | 2,096 | 45 | 12 | 92.6 | 155.2 | 1 (1) | 13019 |
| 748 | 387093 | B | Epsilonproteobacteria | Sulfurovum sp. NBC37-1 | 2007-07-11 | 2008-07-28 | 2,562,277 | 2,466 | 44 | 9 | 89.9 | 150.7 | 1 (1) | 18965 |
| 749 | 292459 | B | Firmicutes | Symbiobacterium thermophilum IAM 14863 | 2004-09-24 | 2008-07-23 | 3,566,135 | 3,337 | 99 | 18 | 86.9 | 147.7 | 1 (1) | 12994 |
| 750 | 269084 | B | Cyanobacteria | Synechococcus elongatus PCC 6301 | 2004-12-21 | 2008-07-22 | 2,696,255 | 2,525 | 45 | 6 | 87.4 | 150.8 | 1 (1) | 13282 |
| 751 | 1140 | B | Cyanobacteria | Synechococcus elongatus PCC 7942 | 2004-03-10 | 2008-07-17 | 2,742,269 | 2,661 | 44 | 6 | 88.5 | 138.2 | 2 (1) | 10645 |
| 752 | 64471 | B | Cyanobacteria | Synechococcus sp. CC9311 | 2006-09-01 | 2008-07-18 | 2,606,748 | 2,892 | 44 | 6 | 86.8 | 127.5 | 1 (1) | 12530 |
| 753 | 110662 | B | Cyanobacteria | Synechococcus sp. CC9605 | 2005-10-27 | 2008-07-18 | 2,510,659 | 2,638 | 45 | 6 | 86.3 | 124.5 | 1 (1) | 13643 |
| 754 | 316279 | B | Cyanobacteria | Synechococcus sp. CC9902 | 2005-10-26 | 2008-10-09 | 2,234,828 | 2,304 | 45 | 6 | 89.4 | 140.2 | 1 (1) | 13655 |
| 755 | 321332 | B | Cyanobacteria | Synechococcus sp. JA-2-3Ba(2-13) | 2006-02-06 | 2009-01-29 | 3,046,682 | 2,862 | 45 | 6 | 85.1 | 146.3 | 1 (1) | 16252 |
| 756 | 321327 | B | Cyanobacteria | Synechococcus sp. JA-3-3Ab | 2006-02-06 | 2009-01-29 | 2,932,766 | 2,760 | 47 | 6 | 84.5 | 143.4 | 1 (1) | 16251 |
| 757 | 32049 | B | Cyanobacteria | Synechococcus sp. PCC 7002 | 2008-03-14 | 2008-07-17 | 3,409,935 | 3,186 | 42 | 6 | 87.2 | 150.1 | 7 (1) | 28247 |
| 758 | 316278 | B | Cyanobacteria | Synechococcus sp. RCC307 | 2007-05-19 | 2008-07-24 | 2,224,914 | 2,535 | 42 | 3 | 94.3 | 134.9 | 1 (1) | 13654 |
| 759 | 32051 | B | Cyanobacteria | Synechococcus sp. WH 7803 | 2007-05-19 | 2008-07-17 | 2,366,980 | 2,533 | 44 | 6 | 92.8 | 141.1 | 1 (1) | 13642 |
| 760 | 84588 | B | Cyanobacteria | Synechococcus sp. WH 8102 | 2003-08-15 | 2008-07-18 | 2,434,428 | 2,526 | 44 | 8 | 89.8 | 128.2 | 1 (1) | 230 |
| 761 | 1148 | B | Cyanobacteria | Synechocystis sp. PCC 6803 | 1995-08-31 | 2008-07-17 | 3,947,019 | 3,564 | 43 | 6 | 86.5 | 155.3 | 5 (1) | 60 |
| 762 | 335543 | B | Deltaproteobacteria | Syntrophobacter fumaroxidans MPOB | 2006-10-26 | 2008-07-25 | 4,990,251 | 4,064 | 51 | 6 | 82.0 | 154.0 | 1 (1) | 13013 |
| 763 | 335541 | B | Other Bacteria | Syntrophomonas wolfei subsp. wolfei str. Goettingen | 2006-09-14 | 2008-07-25 | 2,936,195 | 2,504 | 46 | 19 | 82.5 | 145.8 | 1 (1) | 13014 |
| 764 | 56780 | B | Deltaproteobacteria | Syntrophus aciditrophicus SB | 2006-01-26 | 2008-07-17 | 3,179,300 | 3,168 | 48 | 3 | 88.8 | 145.4 | 1 (1) | 16258 |
| 765 | 85643 | B | Betaproteobacteria | Thauera sp. MZ1T | 2008-12-15 | 0000-00-00 | 78,374 | 75 | 0 | 0 | 77.3 | 94.8 | 1 (0) | 20091 |
| 766 | 340099 | B | Firmicutes | Thermoanaerobacter pseudethanolicus ATCC 33223 | 2008-02-05 | 2008-07-25 | 2,362,816 | 2,243 | 56 | 16 | 86.6 | 137.6 | 1 (1) | 13901 |
| 767 | 399726 | B | Firmicutes | Thermoanaerobacter sp. X514 | 2008-02-05 | 2008-07-29 | 2,457,259 | 2,349 | 54 | 16 | 86.5 | 136.5 | 1 (1) | 16394 |
| 768 | 273068 | B | Firmicutes | Thermoanaerobacter tengcongensis MB4 | 2002-05-09 | 2008-07-23 | 2,689,445 | 2,588 | 55 | 12 | 87.0 | 74.9 | 1 (1) | 249 |
| 769 | 269800 | B | Actinobacteria | Thermobifida fusca YX | 2005-08-08 | 2008-07-22 | 3,642,249 | 3,110 | 52 | 12 | 84.9 | 152.2 | 1 (1) | 94 |
| 770 | 69014 | A | Euryarchaeota | Thermococcus kodakarensis KOD1 | 2005-01-13 | 2008-07-18 | 2,088,737 | 2,306 | 46 | 5 | 91.7 | 136.0 | 1 (1) | 13213 |
| 771 | 523850 | A | Euryarchaeota | Thermococcus onnurineus NA1 | 2008-11-06 | 2008-11-06 | 1,847,607 | 1,976 | 46 | 5 | 90.2 | 136.1 | 1 (1) | 20773 |
| 772 | 289376 | B | Other Bacteria | Thermodesulfovibrio yellowstonii DSM 11347 | 2008-09-26 | 2008-09-26 | 2,003,803 | 2,033 | 47 | 3 | 93.6 | 149.0 | 1 (1) | 30733 |
| 773 | 368408 | A | Crenarchaeota | Thermofilum pendens Hrk 5 | 2006-12-18 | 2008-11-19 | 1,813,393 | 1,876 | 32 | 3 | 90.0 | 131.6 | 2 (1) | 16331 |
| 774 | 309801 | B | Chloroflexi | Thermomicrobium roseum DSM 5159 | 2009-01-22 | 2009-01-27 | 2,920,744 | 2,859 | 44 | 3 | 89.1 | 144.0 | 2 (1) | 32569 |
| 775 | 273075 | A | Euryarchaeota | Thermoplasma acidophilum DSM 1728 | 2000-10-12 | 2008-07-23 | 1,564,906 | 1,478 | 45 | 3 | 86.9 | 146.5 | 1 (1) | 110 |
| 776 | 273116 | A | Euryarchaeota | Thermoplasma volcanium GSS1 | 2000-12-20 | 2008-07-23 | 1,584,804 | 1,526 | 46 | 3 | 85.8 | 143.9 | 1 (1) | 206 |
| 777 | 444157 | A | Crenarchaeota | Thermoproteus neutrophilus V24Sta | 2008-03-27 | 2008-07-30 | 1,769,823 | 1,966 | 38 | 4 | 89.5 | 121.4 | 1 (1) | 15645 |
| 778 | 484019 | B | Thermotogae | Thermosipho africanus TCF52B | 2008-12-10 | 2009-02-27 | 2,016,657 | 1,956 | 48 | 9 | 89.9 | 147.1 | 1 (1) | 27767 |
| 779 | 391009 | B | Thermotogae | Thermosipho melanesiensis BI429 | 2007-06-26 | 2008-07-28 | 1,915,238 | 1,879 | 50 | 12 | 91.2 | 138.2 | 1 (1) | 17249 |
| 780 | 197221 | B | Cyanobacteria | Thermosynechococcus elongatus BP-1 | 2002-09-21 | 2008-07-20 | 2,593,857 | 2,475 | 42 | 3 | 89.6 | 153.9 | 1 (1) | 308 |
| 781 | 416591 | B | Thermotogae | Thermotoga lettingae TMO | 2007-09-18 | 2008-07-29 | 2,135,342 | 2,040 | 46 | 3 | 93.9 | 145.5 | 1 (1) | 15644 |
| 782 | 243274 | B | Thermotogae | Thermotoga maritima MSB8 | 1999-06-09 | 2008-07-21 | 1,860,725 | 1,846 | 46 | 3 | 93.8 | 149.9 | 1 (1) | 111 |
| 783 | 309803 | B | Thermotogae | Thermotoga neapolitana DSM 4359 | 2009-01-27 | 2009-01-28 | 1,884,562 | 1,937 | 48 | 3 | 96.6 | 151.3 | 1 (1) | 21023 |
| 784 | 390874 | B | Thermotogae | Thermotoga petrophila RKU-1 | 2007-05-18 | 2008-07-28 | 1,823,511 | 1,785 | 46 | 3 | 94.4 | 143.7 | 1 (1) | 17089 |
| 785 | 126740 | B | Thermotogae | Thermotoga sp. RQ2 | 2008-03-18 | 2008-07-18 | 1,877,693 | 1,819 | 46 | 3 | 94.3 | 144.7 | 1 (1) | 19543 |
| 786 | 262724 | B | Deinococcus-Thermus | Thermus thermophilus HB27 | 2004-04-06 | 2008-07-21 | 2,127,482 | 2,210 | 47 | 6 | 94.5 | 146.1 | 2 (1) | 10617 |
| 787 | 300852 | B | Deinococcus-Thermus | Thermus thermophilus HB8 | 2004-04-05 | 2008-07-24 | 2,116,056 | 2,238 | 47 | 6 | 94.7 | 143.5 | 3 (1) | 13202 |
| 788 | 396588 | B | Gammaproteobacteria | Thioalkalivibrio sp. HL-EbGR7 | 2009-01-13 | 2009-01-21 | 3,464,554 | 3,283 | 44 | 3 | 87.1 | 136.4 | 1 (1) | 29177 |
| 789 | 292415 | B | Betaproteobacteria | Thiobacillus denitrificans ATCC 25259 | 2005-09-01 | 2008-07-23 | 2,909,809 | 2,827 | 43 | 6 | 92.2 | 139.3 | 1 (1) | 13025 |
| 790 | 317025 | B | Gammaproteobacteria | Thiomicrospira crunogena XCL-2 | 2005-10-31 | 2008-07-24 | 2,427,734 | 2,196 | 43 | 9 | 89.6 | 146.2 | 1 (1) | 13018 |
| 791 | 243275 | B | Spirochaetes | Treponema denticola ATCC 35405 | 2004-04-06 | 2008-07-21 | 2,843,201 | 2,767 | 44 | 6 | 91.5 | 152.2 | 1 (1) | 4 |
| 792 | 455434 | B | Spirochaetes | Treponema pallidum subsp. pallidum SS14 | 2008-05-22 | 2008-09-22 | 1,139,457 | 1,028 | 45 | 6 | 92.2 | 159.4 | 1 (1) | 20067 |
| 793 | 243276 | B | Spirochaetes | Treponema pallidum subsp. pallidum str. Nichols | 1998-07-17 | 2008-07-21 | 1,138,011 | 1,031 | 45 | 6 | 92.4 | 157.5 | 1 (1) | 5 |
| 794 | 203124 | B | Cyanobacteria | Trichodesmium erythraeum IMS101 | 2006-07-06 | 2008-07-20 | 7,750,108 | 4,451 | 38 | 5 | 59.8 | 153.0 | 1 (1) | 318 |
| 795 | 203267 | B | Actinobacteria | Tropheryma whipplei str. Twist | 2003-08-07 | 2008-07-20 | 927,303 | 808 | 49 | 3 | 85.9 | 151.5 | 1 (1) | 95 |
| 796 | 218496 | B | Actinobacteria | Tropheryma whipplei TW08/27 | 2003-02-28 | 2008-07-20 | 925,938 | 784 | 51 | 3 | 84.3 | 80.5 | 1 (1) | 354 |
| 797 | 351160 | A | Euryarchaeota | uncultured methanogenic archaeon RC-I | 2006-07-21 | 2008-07-28 | 3,179,916 | 3,085 | 54 | 9 | 84.4 | 140.5 | 1 (1) | 19641 |
| 798 | 471821 | B | Other Bacteria | uncultured Termite group 1 bacterium phylotype Rs-D17 | 2008-03-18 | 2008-12-16 | 1,148,570 | 776 | 45 | 3 | 65.9 | 147.6 | 4 (1) | 20871 |
| 799 | 505682 | B | Firmicutes | Ureaplasma parvum serovar 3 str. ATCC 27815 | 2008-02-26 | 2008-07-30 | 751,679 | 609 | 27 | 3 | 91.3 | 175.2 | 1 (1) | 19087 |
| 800 | 273119 | B | Firmicutes | Ureaplasma parvum serovar 3 str. ATCC 700970 | 2000-10-26 | 2008-09-22 | 751,719 | 611 | 30 | 6 | 90.9 | 171.9 | 1 (1) | 101 |
| 801 | 565575 | B | Other Bacteria | Ureaplasma urealyticum serovar 10 str. ATCC 33699 | 2008-10-16 | 2008-10-16 | 874,478 | 646 | 27 | 6 | 89.5 | 186.9 | 1 (1) | 20247 |
| 802 | 391735 | B | Betaproteobacteria | Verminephrobacter eiseniae EF01-2 | 2007-01-09 | 2008-07-28 | 5,597,943 | 4,947 | 47 | 9 | 88.8 | 149.6 | 2 (1) | 17187 |
| 803 | 243277 | B | Gammaproteobacteria | Vibrio cholerae O1 biovar El Tor str. N16961 | 2000-08-22 | 2008-07-21 | 4,033,464 | 3,828 | 98 | 24 | 86.4 | 143.3 | 2 (2) | 36 |
| 804 | 345073 | B | Gammaproteobacteria | Vibrio cholerae O395 | 2007-05-08 | 2008-07-25 | 4,132,319 | 3,875 | 96 | 24 | 87.6 | 150.3 | 2 (2) | 15667 |
| 805 | 312309 | B | Gammaproteobacteria | Vibrio fischeri ES114 | 2005-02-11 | 2008-12-08 | 4,273,718 | 3,823 | 118 | 37 | 86.9 | 153.0 | 3 (2) | 12986 |
| 806 | 388396 | B | Gammaproteobacteria | Vibrio fischeri MJ11 | 2008-08-28 | 2009-02-04 | 4,503,336 | 4,039 | 124 | 12 | 87.0 | 154.7 | 3 (2) | 19393 |
| 807 | 338187 | B | Gammaproteobacteria | Vibrio harveyi ATCC BAA-1116 | 2007-08-28 | 2008-09-24 | 6,058,377 | 6,064 | 121 | 24 | 85.5 | 136.5 | 3 (2) | 19857 |
| 808 | 223926 | B | Gammaproteobacteria | Vibrio parahaemolyticus RIMD 2210633 | 2000-06-02 | 2008-07-21 | 5,165,770 | 4,832 | 126 | 34 | 86.7 | 147.8 | 2 (2) | 360 |
| 809 | 575788 | B | Gammaproteobacteria | Vibrio splendidus LGP32 | 2008-12-18 | 2008-12-22 | 4,974,821 | 4,436 | 114 | 26 | 86.0 | 153.8 | 2 (2) | 32815 |
| 810 | 216895 | B | Gammaproteobacteria | Vibrio vulnificus CMCP6 | 2003-09-23 | 2008-09-24 | 5,126,797 | 4,538 | 111 | 0 | 84.9 | 154.9 | 2 (2) | 349 |
| 811 | 196600 | B | Gammaproteobacteria | Vibrio vulnificus YJ016 | 2003-12-06 | 2008-07-20 | 5,260,086 | 5,028 | 112 | 28 | 89.0 | 145.5 | 3 (2) | 1430 |
| 812 | 36870 | B | Gammaproteobacteria | Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis | 2002-09-10 | 2008-07-17 | 703,004 | 611 | 34 | 6 | 86.0 | 151.4 | 2 (1) | 274 |
| 813 | 570417 | B | Alphaproteobacteria | Wolbachia endosymbiont of Culex quinquefasciatus Pel | 2008-06-13 | 2008-11-19 | 1,482,455 | 1,385 | 34 | 3 | 81.6 | 71.0 | 1 (1) | 30313 |
| 814 | 163164 | B | Alphaproteobacteria | Wolbachia endosymbiont of Drosophila melanogaster | 2004-02-11 | 2008-07-19 | 1,267,782 | 1,195 | 34 | 3 | 79.9 | 130.8 | 1 (1) | 272 |
| 815 | 292805 | B | Alphaproteobacteria | Wolbachia endosymbiont strain TRS of Brugia malayi | 2005-02-02 | 2008-07-23 | 1,080,084 | 805 | 34 | 3 | 66.8 | 119.4 | 1 (1) | 12475 |
| 816 | 273121 | B | Epsilonproteobacteria | Wolinella succinogenes DSM 1740 | 2003-09-23 | 2008-07-23 | 2,110,355 | 2,044 | 0 | 0 | 93.7 | 160.3 | 1 (1) | 445 |
| 817 | 78245 | B | Alphaproteobacteria | Xanthobacter autotrophicus Py2 | 2007-07-30 | 2008-07-18 | 5,625,098 | 5,035 | 51 | 6 | 87.3 | 145.5 | 2 (1) | 15756 |
| 818 | 190486 | B | Gammaproteobacteria | Xanthomonas axonopodis pv. citri str. 306 | 2002-05-25 | 2008-07-19 | 5,274,174 | 4,429 | 54 | 6 | 85.9 | 166.2 | 3 (1) | 297 |
| 819 | 314565 | B | Gammaproteobacteria | Xanthomonas campestris pv. campestris str. 8004 | 2005-05-25 | 2008-09-22 | 5,148,708 | 4,273 | 54 | 6 | 84.6 | 164.5 | 1 (1) | 15 |
| 820 | 190485 | B | Gammaproteobacteria | Xanthomonas campestris pv. campestris str. ATCC 33913 | 2002-05-25 | 2008-07-19 | 5,076,188 | 4,181 | 53 | 6 | 84.7 | 167.8 | 1 (1) | 296 |
| 821 | 509169 | B | Gammaproteobacteria | Xanthomonas campestris pv. campestris str. B100 | 2008-02-12 | 2008-10-15 | 5,079,002 | 4,513 | 54 | 6 | 87.2 | 160.8 | 1 (1) | 29801 |
| 822 | 316273 | B | Gammaproteobacteria | Xanthomonas campestris pv. vesicatoria str. 85-10 | 2005-10-21 | 2008-07-24 | 5,420,152 | 4,726 | 56 | 4 | 87.0 | 149.3 | 5 (1) | 13649 |
| 823 | 291331 | B | Gammaproteobacteria | Xanthomonas oryzae pv. oryzae KACC10331 | 2005-02-02 | 2009-02-02 | 4,941,439 | 4,538 | 50 | 6 | 87.4 | 154.1 | 1 (1) | 12931 |
| 824 | 342109 | B | Gammaproteobacteria | Xanthomonas oryzae pv. oryzae MAFF 311018 | 2006-01-04 | 2008-09-15 | 4,940,217 | 4,372 | 53 | 6 | 83.9 | 155.5 | 1 (1) | 16297 |
| 825 | 360094 | B | Gammaproteobacteria | Xanthomonas oryzae pv. oryzae PXO99A | 2008-05-16 | 2008-09-22 | 5,240,075 | 4,988 | 54 | 6 | 81.5 | 139.3 | 1 (1) | 28127 |
| 826 | 160492 | B | Gammaproteobacteria | Xylella fastidiosa 9a5c | 2000-07-26 | 2008-11-12 | 2,731,750 | 2,832 | 49 | 6 | 83.1 | 126.9 | 3 (1) | 271 |
| 827 | 405440 | B | Gammaproteobacteria | Xylella fastidiosa M12 | 2008-02-19 | 2008-07-29 | 2,475,130 | 2,104 | 50 | 6 | 77.2 | 130.6 | 1 (1) | 17823 |
| 828 | 405441 | B | Gammaproteobacteria | Xylella fastidiosa M23 | 2008-04-11 | 2008-07-29 | 2,573,987 | 2,201 | 50 | 6 | 79.3 | 136.4 | 2 (1) | 18457 |
| 829 | 183190 | B | Gammaproteobacteria | Xylella fastidiosa Temecula1 | 2003-01-21 | 2008-09-22 | 2,521,148 | 2,036 | 49 | 6 | 77.8 | 152.9 | 2 (1) | 285 |
| 830 | 393305 | B | Gammaproteobacteria | Yersinia enterocolitica subsp. enterocolitica 8081 | 2007-01-12 | 2008-07-28 | 4,683,620 | 4,137 | 82 | 22 | 83.1 | 77.7 | 2 (1) | 190 |
| 831 | 349746 | B | Gammaproteobacteria | Yersinia pestis Angola | 2007-12-12 | 2008-09-24 | 4,687,014 | 4,045 | 70 | 22 | 76.5 | 137.7 | 3 (1) | 16067 |
| 832 | 360102 | B | Gammaproteobacteria | Yersinia pestis Antiqua | 2006-06-09 | 2008-07-27 | 4,879,836 | 4,364 | 68 | 21 | 83.6 | 138.9 | 4 (1) | 16645 |
| 833 | 229193 | B | Gammaproteobacteria | Yersinia pestis biovar Microtus str. 91001 | 2004-06-04 | 2008-09-24 | 4,803,217 | 4,142 | 72 | 22 | 81.3 | 89.5 | 5 (1) | 10638 |
| 834 | 214092 | B | Gammaproteobacteria | Yersinia pestis CO92 | 2001-10-05 | 2008-12-30 | 4,829,855 | 4,217 | 70 | 19 | 80.0 | 68.1 | 4 (1) | 34 |
| 835 | 187410 | B | Gammaproteobacteria | Yersinia pestis KIM | 2002-07-27 | 2008-07-19 | 4,701,745 | 4,205 | 73 | 24 | 83.2 | 145.4 | 2 (1) | 288 |
| 836 | 377628 | B | Gammaproteobacteria | Yersinia pestis Nepal516 | 2006-06-09 | 2008-07-28 | 4,646,286 | 4,094 | 72 | 21 | 83.5 | 140.5 | 3 (1) | 16646 |
| 837 | 386656 | B | Gammaproteobacteria | Yersinia pestis Pestoides F | 2007-04-13 | 2008-07-28 | 4,725,862 | 4,069 | 72 | 21 | 81.8 | 138.9 | 3 (1) | 16700 |
| 838 | 349747 | B | Gammaproteobacteria | Yersinia pseudotuberculosis IP 31758 | 2007-07-23 | 2008-07-26 | 4,935,125 | 4,324 | 86 | 22 | 82.7 | 150.6 | 3 (1) | 16070 |
| 839 | 273123 | B | Gammaproteobacteria | Yersinia pseudotuberculosis IP 32953 | 2004-09-11 | 2008-07-23 | 4,840,898 | 4,116 | 85 | 21 | 82.3 | 127.2 | 3 (1) | 12950 |
| 840 | 502801 | B | Gammaproteobacteria | Yersinia pseudotuberculosis PB1/+ | 2008-04-25 | 2008-07-30 | 4,765,431 | 4,237 | 83 | 14 | 83.4 | 139.2 | 2 (1) | 28745 |
| 841 | 502800 | B | Gammaproteobacteria | Yersinia pseudotuberculosis YPIII | 2008-03-11 | 2008-07-30 | 4,689,441 | 4,192 | 84 | 14 | 83.4 | 138.9 | 1 (1) | 28743 |
| 842 | 264203 | B | Alphaproteobacteria | Zymomonas mobilis subsp. mobilis ZM4 | 2004-12-12 | 2008-07-22 | 2,056,416 | 1,998 | 51 | 9 | 85.9 | 142.1 | 1 (1) | 12354 |